| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is pyrI
Identifier: 27364848
GI number: 27364848
Start: 1451247
End: 1451708
Strand: Reverse
Name: pyrI
Synonym: VV1_1464
Alternate gene names: 27364848
Gene position: 1451708-1451247 (Counterclockwise)
Preceding gene: 27364849
Following gene: 27364847
Centisome position: 44.23
GC content: 45.45
Gene sequence:
>462_bases ATGAACAAAGAGACAAAATTGCAGGTTGAAGCGATTAAAAACGGTACAGTGATCGACCATATCCCAGCGCAAGTAGGCAT CAAGGTGTTGAAACTGTTTGATATGCACAACTCATCGCAGCGCGTCACCATTGGCTTAAATTTGCCTTCATCCGCTCTGG GTAACAAAGATTTGCTCAAGATTGAAAACGTGTTTATCAACGAAGAGCAAGCGAGCAAATTGGCCCTTTACGCGCCTCAC GCCACCGTCAATCAAATTGAAGATTACCAAGTGGTGAAGAAGCTCGCGTTGGAGCTGCCTGAGTTTGTCAGTGATGTCTT TGAGTGCCCAAACACCAACTGCATTACGCACAATGAGCCAGTCGCGAGTAACTTCCGCGTGTTTGAGAAAAAAGGCGACG TACGTTTGAAGTGTAAATATTGTGAAAAAGTCTTCTCCCGAGAGATCGTCACTGAGCGTTAA
Upstream 100 bases:
>100_bases CGCACGCTTACTACTTCCAGCAAGCAGGCAACGGCGTTTACGCTCGTGAAGCCTTGTTGGCACTGGTACTGAACGAATCA CTGTAAGTAGGAGAATCAAG
Downstream 100 bases:
>100_bases TCGATACGATCCCCGCCTACCTAGCGGGGATTTTTTCTTTACCAATCATTTCTTTCACGGCACACTGAACGCTCTTTGTT TTCCTTGCAATCAAGACGGA
Product: aspartate carbamoyltransferase regulatory subunit
Products: phosphate; N-carbamoyl-L-aspartate
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MNKETKLQVEAIKNGTVIDHIPAQVGIKVLKLFDMHNSSQRVTIGLNLPSSALGNKDLLKIENVFINEEQASKLALYAPH ATVNQIEDYQVVKKLALELPEFVSDVFECPNTNCITHNEPVASNFRVFEKKGDVRLKCKYCEKVFSREIVTER
Sequences:
>Translated_153_residues MNKETKLQVEAIKNGTVIDHIPAQVGIKVLKLFDMHNSSQRVTIGLNLPSSALGNKDLLKIENVFINEEQASKLALYAPH ATVNQIEDYQVVKKLALELPEFVSDVFECPNTNCITHNEPVASNFRVFEKKGDVRLKCKYCEKVFSREIVTER >Mature_153_residues MNKETKLQVEAIKNGTVIDHIPAQVGIKVLKLFDMHNSSQRVTIGLNLPSSALGNKDLLKIENVFINEEQASKLALYAPH ATVNQIEDYQVVKKLALELPEFVSDVFECPNTNCITHNEPVASNFRVFEKKGDVRLKCKYCEKVFSREIVTER
Specific function: Involved in allosteric regulation of aspartate carbamoyltransferase
COG id: COG1781
COG function: function code F; Aspartate carbamoyltransferase, regulatory subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyrI family
Homologues:
Organism=Escherichia coli, GI1790692, Length=150, Percent_Identity=59.3333333333333, Blast_Score=194, Evalue=2e-51,
Paralogues:
None
Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 440 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRI_VIBVU (Q8DCF7)
Other databases:
- EMBL: AE016795 - RefSeq: NP_760376.1 - ProteinModelPortal: Q8DCF7 - SMR: Q8DCF7 - GeneID: 1178378 - GenomeReviews: AE016795_GR - KEGG: vvu:VV1_1464 - HOGENOM: HBG305327 - OMA: EGTVIDH - ProtClustDB: PRK00893 - BioCyc: VVUL216895:VV1_1464-MONOMER - HAMAP: MF_00002 - InterPro: IPR020545 - InterPro: IPR002801 - InterPro: IPR020542 - Gene3D: G3DSA:2.30.30.20 - Gene3D: G3DSA:3.30.70.140 - ProDom: PD006194 - TIGRFAMs: TIGR00240
Pfam domain/function: PF01948 PyrI; PF02748 PyrI_C; SSF54893 Asp_carbamoylTrfase_reg; SSF57825 Asp_transf_reg_C
EC number: 2.1.3.2
Molecular weight: Translated: 17315; Mature: 17315
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKETKLQVEAIKNGTVIDHIPAQVGIKVLKLFDMHNSSQRVTIGLNLPSSALGNKDLLK CCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCCEE IENVFINEEQASKLALYAPHATVNQIEDYQVVKKLALELPEFVSDVFECPNTNCITHNEP EHHEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC VASNFRVFEKKGDVRLKCKYCEKVFSREIVTER CCCCCEEEECCCCEEEEEHHHHHHHHHHHHCCC >Mature Secondary Structure MNKETKLQVEAIKNGTVIDHIPAQVGIKVLKLFDMHNSSQRVTIGLNLPSSALGNKDLLK CCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCCEE IENVFINEEQASKLALYAPHATVNQIEDYQVVKKLALELPEFVSDVFECPNTNCITHNEP EHHEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC VASNFRVFEKKGDVRLKCKYCEKVFSREIVTER CCCCCEEEECCCCEEEEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: carbamoyl phosphate; L-aspartate
Specific reaction: carbamoyl phosphate + L-aspartate = phosphate + N-carbamoyl-L-aspartate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA