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The map label for this gene is ydiY [H]

Identifier: 27364785

GI number: 27364785

Start: 1373838

End: 1374605

Strand: Reverse

Name: ydiY [H]

Synonym: VV1_1391

Alternate gene names: 27364785

Gene position: 1374605-1373838 (Counterclockwise)

Preceding gene: 27364789

Following gene: 326423829

Centisome position: 41.88

GC content: 46.22

Gene sequence:

>768_bases
GTGTTCGTGTCCAATCGCTGGTTTCTGTCGTTAGGTCTATATGCCGTTAGCCTAACTGCTTATGCTGAAGATAATTTGGA
TAAGGACATCGCCCTTCCCTCTCCGTGGAAAAGTGAAGTAGAGTTTGGCTATCAAGCTCACTCAGGCAACTCGGATTCTC
AAGCGCTCAACGCACGGCTCAGTGGGGAATACACGGAAGGTCGCCACCGCTCAAATGGAGAGTGGAAATTCTACAATTTA
TACAAAGATGGCGAAGAAGATAAGCGCACGTCAACTTACAGCCTGCAATCTGACTACAAGTTATCCCCTAAGACCTACCT
TTACGGCAGCTTTAAAGGCATTGATTCACGCTACAGTGCGTACTTCAAAGACTACACAATTTCAGCGGGTTTGGGTTATC
AGTTTGCCAGTACGGATACCTTTGTACTTGAGTTCGAATTCGGTCCTGGCTTTCGTTATCAAGAGCCCAATCTGGATGAA
ATTGATGACGATGACATTATTTTCCCTGAAATCGTCGAAGAAGGGATTTTCCGTGGCAATTTAAAAACCAGTTGGCAAGC
GTTAGAGAATTTGCGTCTCTCGGCCGATATTACGGTCGTCAGTGGTCACAGCAATACGCGAACCGACAGTGATTTAAGTT
TGACCAATAACATTACCGAAGACATTGCCCTTAAGATCGCCCACTCTCGCCAATACCACGACCGAGTGCCCGATGGTCTA
AGCAAAGCTGACAGCGTGTTCTCTGTCAATCTGCTGTTTGCTTTCTAA

Upstream 100 bases:

>100_bases
TGCAGAGTTTGTTGCCCATCTGACAAGTTTTAACTTTAGGCTGACGCACCTATTCTCGTATGTTCGTACTATCCTGAGCC
ATAAGCTCACATTATAAGAG

Downstream 100 bases:

>100_bases
TCTCAATCCTCTGATACGATAAACTCAAGCAATAAAAAAAGCACCTCAGAGAGGTGCTTTAAAATTTCGTCTTGATACTG
AATATTACTCAGCAACAACT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MFVSNRWFLSLGLYAVSLTAYAEDNLDKDIALPSPWKSEVEFGYQAHSGNSDSQALNARLSGEYTEGRHRSNGEWKFYNL
YKDGEEDKRTSTYSLQSDYKLSPKTYLYGSFKGIDSRYSAYFKDYTISAGLGYQFASTDTFVLEFEFGPGFRYQEPNLDE
IDDDDIIFPEIVEEGIFRGNLKTSWQALENLRLSADITVVSGHSNTRTDSDLSLTNNITEDIALKIAHSRQYHDRVPDGL
SKADSVFSVNLLFAF

Sequences:

>Translated_255_residues
MFVSNRWFLSLGLYAVSLTAYAEDNLDKDIALPSPWKSEVEFGYQAHSGNSDSQALNARLSGEYTEGRHRSNGEWKFYNL
YKDGEEDKRTSTYSLQSDYKLSPKTYLYGSFKGIDSRYSAYFKDYTISAGLGYQFASTDTFVLEFEFGPGFRYQEPNLDE
IDDDDIIFPEIVEEGIFRGNLKTSWQALENLRLSADITVVSGHSNTRTDSDLSLTNNITEDIALKIAHSRQYHDRVPDGL
SKADSVFSVNLLFAF
>Mature_255_residues
MFVSNRWFLSLGLYAVSLTAYAEDNLDKDIALPSPWKSEVEFGYQAHSGNSDSQALNARLSGEYTEGRHRSNGEWKFYNL
YKDGEEDKRTSTYSLQSDYKLSPKTYLYGSFKGIDSRYSAYFKDYTISAGLGYQFASTDTFVLEFEFGPGFRYQEPNLDE
IDDDDIIFPEIVEEGIFRGNLKTSWQALENLRLSADITVVSGHSNTRTDSDLSLTNNITEDIALKIAHSRQYHDRVPDGL
SKADSVFSVNLLFAF

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=239, Percent_Identity=26.3598326359833, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 28971; Mature: 28971

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVSNRWFLSLGLYAVSLTAYAEDNLDKDIALPSPWKSEVEFGYQAHSGNSDSQALNARL
CCCCCEEEEEEHEEEEEEEEHHCCCCCCCCCCCCCCCHHHHCCEEECCCCCCHHHEEEEE
SGEYTEGRHRSNGEWKFYNLYKDGEEDKRTSTYSLQSDYKLSPKTYLYGSFKGIDSRYSA
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEECCCEEEEEECCCCCHHHHH
YFKDYTISAGLGYQFASTDTFVLEFEFGPGFRYQEPNLDEIDDDDIIFPEIVEEGIFRGN
HHHCEEEECCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCC
LKTSWQALENLRLSADITVVSGHSNTRTDSDLSLTNNITEDIALKIAHSRQYHDRVPDGL
CCHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCHHCCCCHHHEEEEHHCCHHHHHCCCCH
SKADSVFSVNLLFAF
HCCCCEEEEEEEEEC
>Mature Secondary Structure
MFVSNRWFLSLGLYAVSLTAYAEDNLDKDIALPSPWKSEVEFGYQAHSGNSDSQALNARL
CCCCCEEEEEEHEEEEEEEEHHCCCCCCCCCCCCCCCHHHHCCEEECCCCCCHHHEEEEE
SGEYTEGRHRSNGEWKFYNLYKDGEEDKRTSTYSLQSDYKLSPKTYLYGSFKGIDSRYSA
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEECCCEEEEEECCCCCHHHHH
YFKDYTISAGLGYQFASTDTFVLEFEFGPGFRYQEPNLDEIDDDDIIFPEIVEEGIFRGN
HHHCEEEECCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCC
LKTSWQALENLRLSADITVVSGHSNTRTDSDLSLTNNITEDIALKIAHSRQYHDRVPDGL
CCHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCHHCCCCHHHEEEEHHCCHHHHHCCCCH
SKADSVFSVNLLFAF
HCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]