| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is yheS [H]
Identifier: 27364722
GI number: 27364722
Start: 1309883
End: 1311805
Strand: Reverse
Name: yheS [H]
Synonym: VV1_1323
Alternate gene names: 27364722
Gene position: 1311805-1309883 (Counterclockwise)
Preceding gene: 161501828
Following gene: 27364721
Centisome position: 39.97
GC content: 49.25
Gene sequence:
>1923_bases ATGATTACCTTTTCAGATATCCAGCTGCTGCGCGGCGGCTCTCCTCTCCTTGACCAAGCATCCGCAACGATTCATCCGGG TGATAAAATCGGCCTTGTCGGCAAAAATGGCTGTGGTAAATCCACCCTGTTTGCCTTAATTAAAGACGAACTTTCGATTG ATGCGGGCTCATTTAGCTCTCCTCAACATTGGGAGTTAGCTTGGGTCGCACAGGAAACGCCCGCTTTAGAACGCAGCGCC ATTGAATATGTGATTGATGGCGATCGTGAATATCGTCAGCTTGAACGCCAGTTGGCGGAAGCCGAAGCACAAGAACAAGG GACTCGCATTGCTGAATTGCACGGTAAAATTGAAACCATTGGCGGCTACAGCATTCGTGCACGCGCTTCAGAGCTTTTGG ATGGTTTAGGTTTTAGCCAAGAGCAGATGCATTGGAACCTGACCCAGTTTTCGGGTGGCTGGCGCATGCGTCTCAACCTT GCTCAAGCCCTGCTGTGTCGTTCTGATCTGTTGCTGCTTGACGAACCAACCAACCACTTAGACCTTGATGCTGTCATGTG GCTAGAACGTTGGCTACAAAGCTACCCAGGTACTTTGATGCTGATCTCGCACGACCGTGATTTTCTCGACCCAATCGTGA ACCGCATCGTTCACATTGAAAACCAGAAACTCAATGAGTACACCGGTAACTACTCATCATTTGAAAACCAGCGCGCTCAG AAACTGATCCTGCAACAATCGATGTTTGAGAAGCAGCAGAAGCAGATGGCGCACATGCAAAGCTACATCGATCGTTTCCG CTACAAGGCGTCCAAAGCACGCCAAGCGCAAAGCCGCATCAAAGCGCTGGAGAAGTTAGAAAAAGTGCTCCCCGCACAGT TTGATAACCCATTTAGCTTTGAATTTCGTGAACCTGCCGCGCTGCCAAATCCGATCATGATGATGGATGACGTTTCTGCC GGTTACGGTGACAACCTCATCCTCGATAAAATTCGTCTTAATCTGGTGCCAGGCAGCCGCATTGGTTTGCTCGGCCGCAA CGGCGCTGGTAAATCAACGCTGATCAAGCTCCTCTCCGGAGAGTTGAAAGCCCAAGGTGGCGATTTGACTTACTCGCAAG GCGTCAAAATTGGTTACTTTGCTCAACACCAATTGGAAACCTTGCATCCCGAAGAAACGCCACTGCAACACATGATGCAG ATCGCGCCAGATAAAACCGAACAAGAACTGCGTAATTATCTGGGTAGTTTTGGTTTTCACGGTGACAAAGCACTGGAGAA AGTGGCGCCATTTTCAGGCGGAGAAAAAGCTCGCTTAGTGTTAGCGTTGATCGTCTGGCAAAAACCAAACTTACTGCTGC TCGACGAACCGACCAACCACCTAGACTTAGATATGCGCCAAGCGCTGACACTGGCACTGCAAACCTTTGAAGGCGCGATG GTGATCGTCTCACACGATCGCTATTTGATCCGCGCGACCACCGATGATCTTTACCTAGTGCACGATCGCCAAGTGGCTCC ATTTGATGGTGATCTCAATGACTACTACAAATGGCTCACTGAACAGCAAAAAGCGGAGCGTCGCGAAGCGGCCGCAGAAA TGCCTGCCAAAGACAGCAGCAACAGTGCCGCAGCGAAAAAAGAGCAAAAGCGTCGTGAAGCCGATTTTCGTAAGTTAACC GCACCAATTCGCAAAAAACTGACACAGTTAGAAGCGAAAATGGATAAGTTGGGCGAAGCGTTGGCAGAAGCAGAGCAGCA ATTGTCTGATAACTCACTGTATGATGCCGAAAATAAAGCTAAACTTACTCAAGTACTGGCGCTGCAAGCACAAAGTAAAT CCGCTCTCGAAGAGATTGAAATGGAGTGGATGGCAGAACAGGAAGTACTGGAACAGATGGAACAGGAGTTCAATAGCCAA TGA
Upstream 100 bases:
>100_bases CTCATATTTGCATAATGATCGACATTTATCCTCTTTCCTCCTACTATGCGCAGCAAGAAAGTGCACGAATAAACAGCATT GATAAACTAAGCAGAACGAC
Downstream 100 bases:
>100_bases GTTCAGAGCACGTCCAACCTTCACTTACCCTCGAAAGGCTGTGGCAATTCAGCCTACAATATTATTCGATTCGAGAAGTG AAAGAGGCGTGCCTTGCTTT
Product: glutathione-regulated potassium-efflux system ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MITFSDIQLLRGGSPLLDQASATIHPGDKIGLVGKNGCGKSTLFALIKDELSIDAGSFSSPQHWELAWVAQETPALERSA IEYVIDGDREYRQLERQLAEAEAQEQGTRIAELHGKIETIGGYSIRARASELLDGLGFSQEQMHWNLTQFSGGWRMRLNL AQALLCRSDLLLLDEPTNHLDLDAVMWLERWLQSYPGTLMLISHDRDFLDPIVNRIVHIENQKLNEYTGNYSSFENQRAQ KLILQQSMFEKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALEKLEKVLPAQFDNPFSFEFREPAALPNPIMMMDDVSA GYGDNLILDKIRLNLVPGSRIGLLGRNGAGKSTLIKLLSGELKAQGGDLTYSQGVKIGYFAQHQLETLHPEETPLQHMMQ IAPDKTEQELRNYLGSFGFHGDKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQTFEGAM VIVSHDRYLIRATTDDLYLVHDRQVAPFDGDLNDYYKWLTEQQKAERREAAAEMPAKDSSNSAAAKKEQKRREADFRKLT APIRKKLTQLEAKMDKLGEALAEAEQQLSDNSLYDAENKAKLTQVLALQAQSKSALEEIEMEWMAEQEVLEQMEQEFNSQ
Sequences:
>Translated_640_residues MITFSDIQLLRGGSPLLDQASATIHPGDKIGLVGKNGCGKSTLFALIKDELSIDAGSFSSPQHWELAWVAQETPALERSA IEYVIDGDREYRQLERQLAEAEAQEQGTRIAELHGKIETIGGYSIRARASELLDGLGFSQEQMHWNLTQFSGGWRMRLNL AQALLCRSDLLLLDEPTNHLDLDAVMWLERWLQSYPGTLMLISHDRDFLDPIVNRIVHIENQKLNEYTGNYSSFENQRAQ KLILQQSMFEKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALEKLEKVLPAQFDNPFSFEFREPAALPNPIMMMDDVSA GYGDNLILDKIRLNLVPGSRIGLLGRNGAGKSTLIKLLSGELKAQGGDLTYSQGVKIGYFAQHQLETLHPEETPLQHMMQ IAPDKTEQELRNYLGSFGFHGDKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQTFEGAM VIVSHDRYLIRATTDDLYLVHDRQVAPFDGDLNDYYKWLTEQQKAERREAAAEMPAKDSSNSAAAKKEQKRREADFRKLT APIRKKLTQLEAKMDKLGEALAEAEQQLSDNSLYDAENKAKLTQVLALQAQSKSALEEIEMEWMAEQEVLEQMEQEFNSQ >Mature_640_residues MITFSDIQLLRGGSPLLDQASATIHPGDKIGLVGKNGCGKSTLFALIKDELSIDAGSFSSPQHWELAWVAQETPALERSA IEYVIDGDREYRQLERQLAEAEAQEQGTRIAELHGKIETIGGYSIRARASELLDGLGFSQEQMHWNLTQFSGGWRMRLNL AQALLCRSDLLLLDEPTNHLDLDAVMWLERWLQSYPGTLMLISHDRDFLDPIVNRIVHIENQKLNEYTGNYSSFENQRAQ KLILQQSMFEKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALEKLEKVLPAQFDNPFSFEFREPAALPNPIMMMDDVSA GYGDNLILDKIRLNLVPGSRIGLLGRNGAGKSTLIKLLSGELKAQGGDLTYSQGVKIGYFAQHQLETLHPEETPLQHMMQ IAPDKTEQELRNYLGSFGFHGDKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQTFEGAM VIVSHDRYLIRATTDDLYLVHDRQVAPFDGDLNDYYKWLTEQQKAERREAAAEMPAKDSSNSAAAKKEQKRREADFRKLT APIRKKLTQLEAKMDKLGEALAEAEQQLSDNSLYDAENKAKLTQVLALQAQSKSALEEIEMEWMAEQEVLEQMEQEFNSQ
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=535, Percent_Identity=37.3831775700935, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI10947137, Length=531, Percent_Identity=37.4764595103578, Blast_Score=332, Evalue=5e-91, Organism=Homo sapiens, GI27881506, Length=531, Percent_Identity=37.4764595103578, Blast_Score=332, Evalue=5e-91, Organism=Homo sapiens, GI10947135, Length=544, Percent_Identity=34.5588235294118, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI69354671, Length=544, Percent_Identity=34.5588235294118, Blast_Score=265, Evalue=1e-70, Organism=Escherichia coli, GI1789751, Length=633, Percent_Identity=65.7187993680885, Blast_Score=870, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=33.4593572778828, Blast_Score=306, Evalue=3e-84, Organism=Escherichia coli, GI1787182, Length=636, Percent_Identity=27.8301886792453, Blast_Score=245, Evalue=5e-66, Organism=Escherichia coli, GI2367384, Length=526, Percent_Identity=30.9885931558935, Blast_Score=227, Evalue=2e-60, Organism=Escherichia coli, GI1788165, Length=193, Percent_Identity=30.0518134715026, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI1787758, Length=224, Percent_Identity=27.6785714285714, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1787164, Length=206, Percent_Identity=27.6699029126214, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1787029, Length=216, Percent_Identity=26.8518518518519, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1789891, Length=208, Percent_Identity=29.3269230769231, Blast_Score=66, Evalue=8e-12, Organism=Escherichia coli, GI1788506, Length=207, Percent_Identity=26.5700483091787, Blast_Score=64, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17553372, Length=536, Percent_Identity=39.1791044776119, Blast_Score=362, Evalue=1e-100, Organism=Caenorhabditis elegans, GI17559834, Length=533, Percent_Identity=35.8348968105066, Blast_Score=334, Evalue=9e-92, Organism=Caenorhabditis elegans, GI17555318, Length=510, Percent_Identity=35.6862745098039, Blast_Score=322, Evalue=4e-88, Organism=Caenorhabditis elegans, GI17541710, Length=255, Percent_Identity=27.0588235294118, Blast_Score=68, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=542, Percent_Identity=35.6088560885609, Blast_Score=346, Evalue=6e-96, Organism=Saccharomyces cerevisiae, GI6320874, Length=527, Percent_Identity=34.1555977229602, Blast_Score=310, Evalue=4e-85, Organism=Saccharomyces cerevisiae, GI6325030, Length=402, Percent_Identity=30.3482587064677, Blast_Score=152, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6324314, Length=399, Percent_Identity=27.3182957393484, Blast_Score=136, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6323278, Length=397, Percent_Identity=26.9521410579345, Blast_Score=135, Evalue=1e-32, Organism=Drosophila melanogaster, GI24666836, Length=535, Percent_Identity=37.9439252336449, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24642252, Length=543, Percent_Identity=35.7274401473296, Blast_Score=348, Evalue=9e-96, Organism=Drosophila melanogaster, GI18859989, Length=543, Percent_Identity=35.7274401473296, Blast_Score=348, Evalue=9e-96, Organism=Drosophila melanogaster, GI24641342, Length=535, Percent_Identity=34.9532710280374, Blast_Score=313, Evalue=2e-85, Organism=Drosophila melanogaster, GI116007184, Length=162, Percent_Identity=30.8641975308642, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI221500365, Length=162, Percent_Identity=30.8641975308642, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 72492; Mature: 72492
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITFSDIQLLRGGSPLLDQASATIHPGDKIGLVGKNGCGKSTLFALIKDELSIDAGSFSS CCCCHHHHHHCCCCCCHHCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC PQHWELAWVAQETPALERSAIEYVIDGDREYRQLERQLAEAEAQEQGTRIAELHGKIETI CCCEEEEEEECCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEC GGYSIRARASELLDGLGFSQEQMHWNLTQFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL CCCCHHHHHHHHHHHCCCCHHHHEEEHEEECCCEEEHHHHHHHHHHHCCEEEEECCCCCC DLDAVMWLERWLQSYPGTLMLISHDRDFLDPIVNRIVHIENQKLNEYTGNYSSFENQRAQ CHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEECCCCHHHHHCCCHHHHHHHHHH KLILQQSMFEKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALEKLEKVLPAQFDNPFSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EFREPAALPNPIMMMDDVSAGYGDNLILDKIRLNLVPGSRIGLLGRNGAGKSTLIKLLSG CCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH ELKAQGGDLTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKTEQELRNYLGSFGFH HHHCCCCCEEHHCCCEEEEEHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCC GDKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQTFEGAM CHHHHHHHCCCCCCCHHEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEE VIVSHDRYLIRATTDDLYLVHDRQVAPFDGDLNDYYKWLTEQQKAERREAAAEMPAKDSS EEEECCCEEEEECCCCEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NSAAAKKEQKRREADFRKLTAPIRKKLTQLEAKMDKLGEALAEAEQQLSDNSLYDAENKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH KLTQVLALQAQSKSALEEIEMEWMAEQEVLEQMEQEFNSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MITFSDIQLLRGGSPLLDQASATIHPGDKIGLVGKNGCGKSTLFALIKDELSIDAGSFSS CCCCHHHHHHCCCCCCHHCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC PQHWELAWVAQETPALERSAIEYVIDGDREYRQLERQLAEAEAQEQGTRIAELHGKIETI CCCEEEEEEECCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEC GGYSIRARASELLDGLGFSQEQMHWNLTQFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL CCCCHHHHHHHHHHHCCCCHHHHEEEHEEECCCEEEHHHHHHHHHHHCCEEEEECCCCCC DLDAVMWLERWLQSYPGTLMLISHDRDFLDPIVNRIVHIENQKLNEYTGNYSSFENQRAQ CHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEECCCCHHHHHCCCHHHHHHHHHH KLILQQSMFEKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALEKLEKVLPAQFDNPFSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EFREPAALPNPIMMMDDVSAGYGDNLILDKIRLNLVPGSRIGLLGRNGAGKSTLIKLLSG CCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH ELKAQGGDLTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKTEQELRNYLGSFGFH HHHCCCCCEEHHCCCEEEEEHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCC GDKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQTFEGAM CHHHHHHHCCCCCCCHHEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEE VIVSHDRYLIRATTDDLYLVHDRQVAPFDGDLNDYYKWLTEQQKAERREAAAEMPAKDSS EEEECCCEEEEECCCCEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NSAAAKKEQKRREADFRKLTAPIRKKLTQLEAKMDKLGEALAEAEQQLSDNSLYDAENKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH KLTQVLALQAQSKSALEEIEMEWMAEQEVLEQMEQEFNSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]