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The map label for this gene is frdC [H]

Identifier: 27364668

GI number: 27364668

Start: 1251950

End: 1252333

Strand: Reverse

Name: frdC [H]

Synonym: VV1_1267

Alternate gene names: 27364668

Gene position: 1252333-1251950 (Counterclockwise)

Preceding gene: 27364669

Following gene: 27364667

Centisome position: 38.16

GC content: 48.44

Gene sequence:

>384_bases
ATGAGCAATCGTAAACCTTACGTTCGTGAAGTAAAACGCACTTGGTGGAAAGATCACCCATTCTACCGCTTCTACATGCT
ACGTGAAGCCACTGTGCTGCCATTGATTCTCTTCACCTTGTTCCTGACTGTCGGTTTGGGTTCTCTGGTGAAAGGGCCAG
AAGCTTGGCAAACGTGGTTGAACTTTATGGCGAACCCAGTGGTGATCGCGATTAACATCGTCGCCTTACTCGGCAGCCTA
CTGCATGCTCATACCTTCTTCAGTATGATGCCTCAGGTCATGCCAATTCGTTTGAAGGGCAAACCTGTTGATAAGAAAAT
CATCGTGCTCGCTCAGTGGGCGGCGGTGGCATTTATCTCACTGATCGTACTTATCGTGGTGTAA

Upstream 100 bases:

>100_bases
CTGCTGCCGCGGTTAACCAAGGCAAAGTCGAGTCATCAATGGACTTCGTCATTGCAATGCTGAAACCTGATGGTTCACCA
AAGAAAGTGGAGGCATAAGA

Downstream 100 bases:

>100_bases
GGAGCTTTAACGATGAAACCGAATTACAACGTAGATAGAGCGCCAAAACGTTCTGATGAGCCAGTTTGGTGGAGCTTGTT
TGGTGCAGGTGGTACTTGGT

Product: fumarate reductase subunit C

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSNRKPYVREVKRTWWKDHPFYRFYMLREATVLPLILFTLFLTVGLGSLVKGPEAWQTWLNFMANPVVIAINIVALLGSL
LHAHTFFSMMPQVMPIRLKGKPVDKKIIVLAQWAAVAFISLIVLIVV

Sequences:

>Translated_127_residues
MSNRKPYVREVKRTWWKDHPFYRFYMLREATVLPLILFTLFLTVGLGSLVKGPEAWQTWLNFMANPVVIAINIVALLGSL
LHAHTFFSMMPQVMPIRLKGKPVDKKIIVLAQWAAVAFISLIVLIVV
>Mature_126_residues
SNRKPYVREVKRTWWKDHPFYRFYMLREATVLPLILFTLFLTVGLGSLVKGPEAWQTWLNFMANPVVIAINIVALLGSLL
HAHTFFSMMPQVMPIRLKGKPVDKKIIVLAQWAAVAFISLIVLIVV

Specific function: Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane [H]

COG id: COG3029

COG function: function code C; Fumarate reductase subunit C

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frdC family [H]

Homologues:

Organism=Escherichia coli, GI1790595, Length=125, Percent_Identity=41.6, Blast_Score=114, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003510
- ProDom:   PD015900 [H]

Pfam domain/function: PF02300 Fumarate_red_C [H]

EC number: 1.3.99.1

Molecular weight: Translated: 14593; Mature: 14462

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRKPYVREVKRTWWKDHPFYRFYMLREATVLPLILFTLFLTVGLGSLVKGPEAWQTWL
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NFMANPVVIAINIVALLGSLLHAHTFFSMMPQVMPIRLKGKPVDKKIIVLAQWAAVAFIS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHH
LIVLIVV
HHHHHHC
>Mature Secondary Structure 
SNRKPYVREVKRTWWKDHPFYRFYMLREATVLPLILFTLFLTVGLGSLVKGPEAWQTWL
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NFMANPVVIAINIVALLGSLLHAHTFFSMMPQVMPIRLKGKPVDKKIIVLAQWAAVAFIS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHH
LIVLIVV
HHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA