| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
Click here to switch to the map view.
The map label for this gene is 27364553
Identifier: 27364553
GI number: 27364553
Start: 1134248
End: 1135798
Strand: Reverse
Name: 27364553
Synonym: VV1_1134
Alternate gene names: NA
Gene position: 1135798-1134248 (Counterclockwise)
Preceding gene: 27364555
Following gene: 27364552
Centisome position: 34.61
GC content: 52.35
Gene sequence:
>1551_bases ATGAAGGCGTTTAAAAACCCAGTCGCCCTATCGACACTGTTGCTGTTACAAGCGTGTTCAACCAGCGCCCCCGTCGCCAC TCAATCTGCTCCTGTGCTGCCAACGGCCAATCTCAGCCAGCCAGAGTCGGTGATCGCACAGAGCTTTATGCTGTCAGGCA GTTTGGTCGTCGGCCATGAAGCACAATACATCACACCTTGCGGCAGTACGCAGCAATATTGGCTACAGCTAAGTGCTCAG CAACGTCAGCAATTGATGGCGCTGACCAGCCTGCCCTATCAGTCCATGTATGGCGAAGTGATCGGCCATTTAAAAACCAC CGGTGATGAAGGTTTTGCTTCGGAATACGATGCGTTGTTTGTGGTGGAGCAACTCAACTTAGTCGATGCCAGCAACCCAA CCCGCTGCGAGCAAGCCGCTCGCCCAACGCAAGCATTTGGTAATGAGCCCAACTGGCGTATCGATTTTGCTGCCAATCAG CTGACCATCAAGCAACTGAGCAAACAAGAGCAAACGCGTGTGATTAGCCGCAGCCAACTCAGCCCCCGAAAACGCGAGTA TCAGTTTGATGACGGCCAATTGCTCCTCAGCGAAAATTTGTGCAAAGACACCATGAGCAACAGCCTTTACGGATGGAAAG CAACGCTTGACTGGCAAGATACCCAGCTATCTGGCTGTGCCACCACCTCGAACATCGATGCCACGCTCGGTTGGGGTGGT TTGTACACAGCCACCTCAACCCAATCTTCCGGTTTTAGCGTGCACATGCAGCTCAACGCAGACCACAGCGCTGAAACGCG TTATCTCTATGCCAATGAAGAGCGTCCTTTGGTGGAAAAAGGCTACTGGCAGCAACTCAATCCCAACCAGATCCAAGTCG TGATGACGCATCATCAGGGGCAAAAATTAGTCACCGAACGCATTTTCACCCGCACGGGCTCACAGCTGAAAGCGGACAAG GAAAAAGTCGGCAAGGTGGTCTATCCGATTGCTCAAGGGGGGCTGATTTTGTATCCCGCCGCCGCAGGTGAAATGATGAG TGACACTCCCATCACCACTCAAACTGCCGTTCCCACAGACACCCGTAACGTAGCCTCCAGCGCGGAGTTTCGTCGCGATG TTGATCAGGCAATACGTGAGTATTTTCGTCTGCACAAAACCGATCCAAGCAATAACCAATACCGCTGGCTAACGTACGAT CTCAATGGAGATGGCAAAGAAGAACTGCTGGCGCAATTGGATTGGTGCGGCTCGGGTGGCTGTACCCTGCTGATTTTTGA AAATCATCAAGAAACTTGGCGCTTCAATAGCCGCATTACCTTGGTGAACACACCGATTTACCTCGGCAATCAACGCAACC ACGGCTGGCAAGATCTTATCTTCAACGTCAGTGGCGGCGGCGCCAAAGCTCAGTCACACCTGATGCAATATGATGGTATT AGCTATCCACTCAATCCGAGCGTTGCGCCTGTCGCGCTTGGTGAGCAGATCAGTCAGGTAGAACTGTTTTCTGATGGCAT CAGCCCGGTACGCGAAGGAGTGAAACTGTGA
Upstream 100 bases:
>100_bases ACGCGTAAAGTGTCGATAGAAAAGGTGTCCGGTTCAGTTTTAAACAACCAATATGCCATAATGCGGTCCAAGCAGATTTA GAGATGGAGAAAGATATAAC
Downstream 100 bases:
>100_bases AGCCACAAGCCTGCCCTCAGTGTGGGCTGCGTTATCAATGCTTGTGTGACCAGTTTCCATCACTGCAAAGTGAGGTCGCA CTGGTGCTATTGATGCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MKAFKNPVALSTLLLLQACSTSAPVATQSAPVLPTANLSQPESVIAQSFMLSGSLVVGHEAQYITPCGSTQQYWLQLSAQ QRQQLMALTSLPYQSMYGEVIGHLKTTGDEGFASEYDALFVVEQLNLVDASNPTRCEQAARPTQAFGNEPNWRIDFAANQ LTIKQLSKQEQTRVISRSQLSPRKREYQFDDGQLLLSENLCKDTMSNSLYGWKATLDWQDTQLSGCATTSNIDATLGWGG LYTATSTQSSGFSVHMQLNADHSAETRYLYANEERPLVEKGYWQQLNPNQIQVVMTHHQGQKLVTERIFTRTGSQLKADK EKVGKVVYPIAQGGLILYPAAAGEMMSDTPITTQTAVPTDTRNVASSAEFRRDVDQAIREYFRLHKTDPSNNQYRWLTYD LNGDGKEELLAQLDWCGSGGCTLLIFENHQETWRFNSRITLVNTPIYLGNQRNHGWQDLIFNVSGGGAKAQSHLMQYDGI SYPLNPSVAPVALGEQISQVELFSDGISPVREGVKL
Sequences:
>Translated_516_residues MKAFKNPVALSTLLLLQACSTSAPVATQSAPVLPTANLSQPESVIAQSFMLSGSLVVGHEAQYITPCGSTQQYWLQLSAQ QRQQLMALTSLPYQSMYGEVIGHLKTTGDEGFASEYDALFVVEQLNLVDASNPTRCEQAARPTQAFGNEPNWRIDFAANQ LTIKQLSKQEQTRVISRSQLSPRKREYQFDDGQLLLSENLCKDTMSNSLYGWKATLDWQDTQLSGCATTSNIDATLGWGG LYTATSTQSSGFSVHMQLNADHSAETRYLYANEERPLVEKGYWQQLNPNQIQVVMTHHQGQKLVTERIFTRTGSQLKADK EKVGKVVYPIAQGGLILYPAAAGEMMSDTPITTQTAVPTDTRNVASSAEFRRDVDQAIREYFRLHKTDPSNNQYRWLTYD LNGDGKEELLAQLDWCGSGGCTLLIFENHQETWRFNSRITLVNTPIYLGNQRNHGWQDLIFNVSGGGAKAQSHLMQYDGI SYPLNPSVAPVALGEQISQVELFSDGISPVREGVKL >Mature_516_residues MKAFKNPVALSTLLLLQACSTSAPVATQSAPVLPTANLSQPESVIAQSFMLSGSLVVGHEAQYITPCGSTQQYWLQLSAQ QRQQLMALTSLPYQSMYGEVIGHLKTTGDEGFASEYDALFVVEQLNLVDASNPTRCEQAARPTQAFGNEPNWRIDFAANQ LTIKQLSKQEQTRVISRSQLSPRKREYQFDDGQLLLSENLCKDTMSNSLYGWKATLDWQDTQLSGCATTSNIDATLGWGG LYTATSTQSSGFSVHMQLNADHSAETRYLYANEERPLVEKGYWQQLNPNQIQVVMTHHQGQKLVTERIFTRTGSQLKADK EKVGKVVYPIAQGGLILYPAAAGEMMSDTPITTQTAVPTDTRNVASSAEFRRDVDQAIREYFRLHKTDPSNNQYRWLTYD LNGDGKEELLAQLDWCGSGGCTLLIFENHQETWRFNSRITLVNTPIYLGNQRNHGWQDLIFNVSGGGAKAQSHLMQYDGI SYPLNPSVAPVALGEQISQVELFSDGISPVREGVKL
Specific function: Unknown
COG id: COG3650
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57284; Mature: 57284
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFKNPVALSTLLLLQACSTSAPVATQSAPVLPTANLSQPESVIAQSFMLSGSLVVGHE CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECC AQYITPCGSTQQYWLQLSAQQRQQLMALTSLPYQSMYGEVIGHLKTTGDEGFASEYDALF CEEEECCCCCHHHHEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEE VVEQLNLVDASNPTRCEQAARPTQAFGNEPNWRIDFAANQLTIKQLSKQEQTRVISRSQL EEEEEEEECCCCCCHHHHHCCCHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC SPRKREYQFDDGQLLLSENLCKDTMSNSLYGWKATLDWQDTQLSGCATTSNIDATLGWGG CCHHHCCCCCCCCEEECHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCCCCEEECCCC LYTATSTQSSGFSVHMQLNADHSAETRYLYANEERPLVEKGYWQQLNPNQIQVVMTHHQG EEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHCCCCCCCCCCEEEEEEEECCC QKLVTERIFTRTGSQLKADKEKVGKVVYPIAQGGLILYPAAAGEMMSDTPITTQTAVPTD HHHHHHHHHHHCCCHHHHCHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCEECCCCCC TRNVASSAEFRRDVDQAIREYFRLHKTDPSNNQYRWLTYDLNGDGKEELLAQLDWCGSGG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCC CTLLIFENHQETWRFNSRITLVNTPIYLGNQRNHGWQDLIFNVSGGGAKAQSHLMQYDGI EEEEEECCCCCCEEECCEEEEEECCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC SYPLNPSVAPVALGEQISQVELFSDGISPVREGVKL CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure MKAFKNPVALSTLLLLQACSTSAPVATQSAPVLPTANLSQPESVIAQSFMLSGSLVVGHE CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECC AQYITPCGSTQQYWLQLSAQQRQQLMALTSLPYQSMYGEVIGHLKTTGDEGFASEYDALF CEEEECCCCCHHHHEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEE VVEQLNLVDASNPTRCEQAARPTQAFGNEPNWRIDFAANQLTIKQLSKQEQTRVISRSQL EEEEEEEECCCCCCHHHHHCCCHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC SPRKREYQFDDGQLLLSENLCKDTMSNSLYGWKATLDWQDTQLSGCATTSNIDATLGWGG CCHHHCCCCCCCCEEECHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCCCCEEECCCC LYTATSTQSSGFSVHMQLNADHSAETRYLYANEERPLVEKGYWQQLNPNQIQVVMTHHQG EEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHCCCCCCCCCCEEEEEEEECCC QKLVTERIFTRTGSQLKADKEKVGKVVYPIAQGGLILYPAAAGEMMSDTPITTQTAVPTD HHHHHHHHHHHCCCHHHHCHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCEECCCCCC TRNVASSAEFRRDVDQAIREYFRLHKTDPSNNQYRWLTYDLNGDGKEELLAQLDWCGSGG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCC CTLLIFENHQETWRFNSRITLVNTPIYLGNQRNHGWQDLIFNVSGGGAKAQSHLMQYDGI EEEEEECCCCCCEEECCEEEEEECCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC SYPLNPSVAPVALGEQISQVELFSDGISPVREGVKL CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA