| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is pstC1 [H]
Identifier: 27363930
GI number: 27363930
Start: 458906
End: 461098
Strand: Reverse
Name: pstC1 [H]
Synonym: VV1_0463
Alternate gene names: 27363930
Gene position: 461098-458906 (Counterclockwise)
Preceding gene: 27363933
Following gene: 27363929
Centisome position: 14.05
GC content: 48.2
Gene sequence:
>2193_bases ATGGCCAGAGCCGAGTTCACATTGCAGACCAGAGACAAGTCGAGATTGTTAAAAGATCGCCTAGTTCGTTTGGCTGTAAC CAGTGGCGGTGTTGGGGTTTTGGCTGCCTTAGTGTTGATTTTTGTCTATTTAGCGATGGTGGTGATCCCACTCTTTTCGG ACGCTAAACTAGAACCCAATAAACTCAGTATGCCTATTGCGACGAAGCCGCCCGTCGCGATTGCTGTTGATGATTATGGC CTTAGAGCATTGACTATTACCGAAGATGGTCGTCTAACGTTTTGGCAGCTAGATAGTGGTGAGGCAATACTCGAAACACA AATCAGTGAGAATCCGACCGCTTTTGCCAAGAGTGTTTCTGCGTTAGACAGCTATGGCTTTGTTTCTCAGCAAGGGCTAG TGACGTTGTTTAAACCTCGTTTTAACAGTTCGCTGGCGAAGAGTGTTCAACGACCTGAGGTTGAGATTTATGCCCCTAGC TTTGACTTTCGTCTTGCGGCGCAAGGCAGTGATATCGCACGGTTTGCGTTCAGTAACGTAGAACCTTCTCCAACGCTAAC TTGGTTAACAAACGATGGACGAGTCCACGTTCGTTGGCAGCAAAGTGTGCAAGGTGAGTGGGTGCAACGCGATTTCCAAT TCGCAACCAGTTTTGATGCGGCATCGCAACTTCTTATAACGCCAGATGGAGAAACCCTCTACGTACGTTCTGGTTCTGAG TTGGTGGTGGCGAAGAAGCGTGATGAGCAATTTGTTGTGCGAGAGATTGTTGATCTCACCTTGGGTGATCAGAAGCACTC AGTACGTCAAATAGACCTGCTTGCCGGAGCCTACTCTTTATTGGTCACCCACAATGATGGCCGGGTGTCGCAATGGTTTG ATACCCGTCAGCAAAATCAGCGCAAATTGACGCACATTCGTGATTTTAAGTTAGCTTCAGAAGTGCAATTCCTCTTGCCG GATACGCATCGTAAAGGCTTCTACAGTTTTTATACCAACGGAACGTTACAGAGCCACTATACCACCAGTGAAAAATTGGC TCTGTTTTTGCGCGCCTATCAACAAGCCCCGCAGATGGCGGCTATGTCGAATAATGAACAATACCTTTTAACGTATTTTC CCGAACGATTAACGCTGGCGACGGTGGACAATCCATACCCTGAAATTTCGCTGTCATCGCTGTGGCAAAAGGTGTGGTAT GAAGGTTATCCAGAGCCCGAGTTTGTTTGGCAATCCACTTCAGCAAGTGACGATTTTGAAGCGAAGTTCAGTATCGTTCC GATTGCTTTTGGTACCATTAAGGCTGCGCTGTTCGCCATGCTGTTTTCTGTTCCCATTGCTGTTCTTGGTGCCATCTATA CCGGTTATTTTATGGCGCCGAAAATGCGTCGTATCGTTAAACCTTCCATTGAACTAATGGAAGCGATGCCAACGGTCATT ATCGGTTTTTTAGCGGGCTTGTGGTTTGCACCGATCGTTGAGCAGCATCTGATCAGTGTGGTGCTACTGATGGTTGTGCT ACCTCTGAGTACCGTCTTTATTGGTGGACTTTGGACTCTGTTGCCCGCGACGATACGACATCGTATTCCTAATGGTTGGC ATGCTCTGATCTTAATCCCGAGTATGGTGCTGGTCGTCGCGCTCGGAATGCAGTTTGCTCCTGAATTGGAAACGCTATTT TTTGCTGGCGATATTCGGTTATTTTTATCGCAGCATGGGATTGGTTTTGACCAGCGTAATGCGATGGTGGTGGGATTAGC CATGGGCTTTGCTGTGATTCCAACCATTTTTACCATAGCGGAGGATGCGATTTTCTCCGTGCCTAAGCATCTCTCTGATG GTTCTTTGGCGCTGGGCGCGACAGCGTGGCAAACGCTCACTCATGTGGTGATTCTCACCGCGAGCCCGGGAATTTTTTCT GCCATCATGATGGGGCTTGGGCGTGCTGTTGGCGAAACCATGATCGTTTTAATGGCGACTGGAAACACGCCGCTAATGGA TTGGAATATTTTGGAAGGGATGCGCACCTTATCTGCGACCATTGCGGTTGAGTTGCCGGAATCAGAAGTGGGCAGTTCGC ACTTCCGATTATTGTTTTTAGCCGCCCTATTGCTGTTTGTTTTCACCTTCGCCGTCAACTCGCTGGCCGAGTGGGTACGC CAAAGATTAAGAGATAAATATCGTGCGCTGTGA
Upstream 100 bases:
>100_bases ATAATAGTTGTATTATTTTCATATGGTTAATGTGATCTGTAATATAATTGTCATCTTAACGAAATATTATGTCAGCACGT CAAAAAGGGTAGAAAATTCG
Downstream 100 bases:
>100_bases TCATAGTCGAATGTTGGGAGAGCTAGCGTGCTGAAATGGATTCGTTCAGGAGCGCCGTGGATTTGGCTGACAGGGGGAGC GGTCAGCATCAGCTTGCTTT
Product: phosphate transport system permease pstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 730; Mature: 729
Protein sequence:
>730_residues MARAEFTLQTRDKSRLLKDRLVRLAVTSGGVGVLAALVLIFVYLAMVVIPLFSDAKLEPNKLSMPIATKPPVAIAVDDYG LRALTITEDGRLTFWQLDSGEAILETQISENPTAFAKSVSALDSYGFVSQQGLVTLFKPRFNSSLAKSVQRPEVEIYAPS FDFRLAAQGSDIARFAFSNVEPSPTLTWLTNDGRVHVRWQQSVQGEWVQRDFQFATSFDAASQLLITPDGETLYVRSGSE LVVAKKRDEQFVVREIVDLTLGDQKHSVRQIDLLAGAYSLLVTHNDGRVSQWFDTRQQNQRKLTHIRDFKLASEVQFLLP DTHRKGFYSFYTNGTLQSHYTTSEKLALFLRAYQQAPQMAAMSNNEQYLLTYFPERLTLATVDNPYPEISLSSLWQKVWY EGYPEPEFVWQSTSASDDFEAKFSIVPIAFGTIKAALFAMLFSVPIAVLGAIYTGYFMAPKMRRIVKPSIELMEAMPTVI IGFLAGLWFAPIVEQHLISVVLLMVVLPLSTVFIGGLWTLLPATIRHRIPNGWHALILIPSMVLVVALGMQFAPELETLF FAGDIRLFLSQHGIGFDQRNAMVVGLAMGFAVIPTIFTIAEDAIFSVPKHLSDGSLALGATAWQTLTHVVILTASPGIFS AIMMGLGRAVGETMIVLMATGNTPLMDWNILEGMRTLSATIAVELPESEVGSSHFRLLFLAALLLFVFTFAVNSLAEWVR QRLRDKYRAL
Sequences:
>Translated_730_residues MARAEFTLQTRDKSRLLKDRLVRLAVTSGGVGVLAALVLIFVYLAMVVIPLFSDAKLEPNKLSMPIATKPPVAIAVDDYG LRALTITEDGRLTFWQLDSGEAILETQISENPTAFAKSVSALDSYGFVSQQGLVTLFKPRFNSSLAKSVQRPEVEIYAPS FDFRLAAQGSDIARFAFSNVEPSPTLTWLTNDGRVHVRWQQSVQGEWVQRDFQFATSFDAASQLLITPDGETLYVRSGSE LVVAKKRDEQFVVREIVDLTLGDQKHSVRQIDLLAGAYSLLVTHNDGRVSQWFDTRQQNQRKLTHIRDFKLASEVQFLLP DTHRKGFYSFYTNGTLQSHYTTSEKLALFLRAYQQAPQMAAMSNNEQYLLTYFPERLTLATVDNPYPEISLSSLWQKVWY EGYPEPEFVWQSTSASDDFEAKFSIVPIAFGTIKAALFAMLFSVPIAVLGAIYTGYFMAPKMRRIVKPSIELMEAMPTVI IGFLAGLWFAPIVEQHLISVVLLMVVLPLSTVFIGGLWTLLPATIRHRIPNGWHALILIPSMVLVVALGMQFAPELETLF FAGDIRLFLSQHGIGFDQRNAMVVGLAMGFAVIPTIFTIAEDAIFSVPKHLSDGSLALGATAWQTLTHVVILTASPGIFS AIMMGLGRAVGETMIVLMATGNTPLMDWNILEGMRTLSATIAVELPESEVGSSHFRLLFLAALLLFVFTFAVNSLAEWVR QRLRDKYRAL >Mature_729_residues ARAEFTLQTRDKSRLLKDRLVRLAVTSGGVGVLAALVLIFVYLAMVVIPLFSDAKLEPNKLSMPIATKPPVAIAVDDYGL RALTITEDGRLTFWQLDSGEAILETQISENPTAFAKSVSALDSYGFVSQQGLVTLFKPRFNSSLAKSVQRPEVEIYAPSF DFRLAAQGSDIARFAFSNVEPSPTLTWLTNDGRVHVRWQQSVQGEWVQRDFQFATSFDAASQLLITPDGETLYVRSGSEL VVAKKRDEQFVVREIVDLTLGDQKHSVRQIDLLAGAYSLLVTHNDGRVSQWFDTRQQNQRKLTHIRDFKLASEVQFLLPD THRKGFYSFYTNGTLQSHYTTSEKLALFLRAYQQAPQMAAMSNNEQYLLTYFPERLTLATVDNPYPEISLSSLWQKVWYE GYPEPEFVWQSTSASDDFEAKFSIVPIAFGTIKAALFAMLFSVPIAVLGAIYTGYFMAPKMRRIVKPSIELMEAMPTVII GFLAGLWFAPIVEQHLISVVLLMVVLPLSTVFIGGLWTLLPATIRHRIPNGWHALILIPSMVLVVALGMQFAPELETLFF AGDIRLFLSQHGIGFDQRNAMVVGLAMGFAVIPTIFTIAEDAIFSVPKHLSDGSLALGATAWQTLTHVVILTASPGIFSA IMMGLGRAVGETMIVLMATGNTPLMDWNILEGMRTLSATIAVELPESEVGSSHFRLLFLAALLLFVFTFAVNSLAEWVRQ RLRDKYRAL
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4590
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=357, Percent_Identity=23.8095238095238, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 81279; Mature: 81148
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAEFTLQTRDKSRLLKDRLVRLAVTSGGVGVLAALVLIFVYLAMVVIPLFSDAKLEPN CCCCEEEEECCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KLSMPIATKPPVAIAVDDYGLRALTITEDGRLTFWQLDSGEAILETQISENPTAFAKSVS CCCCCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCHHHHHHHHH ALDSYGFVSQQGLVTLFKPRFNSSLAKSVQRPEVEIYAPSFDFRLAAQGSDIARFAFSNV HHHHCCCCCCCCCEEEECCCCCHHHHHHHCCCCEEEECCCCCEEEECCCCCHHHHHHCCC EPSPTLTWLTNDGRVHVRWQQSVQGEWVQRDFQFATSFDAASQLLITPDGETLYVRSGSE CCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCE LVVAKKRDEQFVVREIVDLTLGDQKHSVRQIDLLAGAYSLLVTHNDGRVSQWFDTRQQNQ EEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHH RKLTHIRDFKLASEVQFLLPDTHRKGFYSFYTNGTLQSHYTTSEKLALFLRAYQQAPQMA HHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCEEECCCCCHHHHHHHHHHHHHCCCHH AMSNNEQYLLTYFPERLTLATVDNPYPEISLSSLWQKVWYEGYPEPEFVWQSTSASDDFE HHCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCC AKFSIVPIAFGTIKAALFAMLFSVPIAVLGAIYTGYFMAPKMRRIVKPSIELMEAMPTVI CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHH IGFLAGLWFAPIVEQHLISVVLLMVVLPLSTVFIGGLWTLLPATIRHRIPNGWHALILIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH SMVLVVALGMQFAPELETLFFAGDIRLFLSQHGIGFDQRNAMVVGLAMGFAVIPTIFTIA HHHHHHHHCCCCCCCHHHEEEECHHEEEEHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHH EDAIFSVPKHLSDGSLALGATAWQTLTHVVILTASPGIFSAIMMGLGRAVGETMIVLMAT HHHHHHCCCCCCCCCEEECHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEEC GNTPLMDWNILEGMRTLSATIAVELPESEVGSSHFRLLFLAALLLFVFTFAVNSLAEWVR CCCCCCCHHHHHHHHHHEEEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLRDKYRAL HHHHHHHCCC >Mature Secondary Structure ARAEFTLQTRDKSRLLKDRLVRLAVTSGGVGVLAALVLIFVYLAMVVIPLFSDAKLEPN CCCEEEEECCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KLSMPIATKPPVAIAVDDYGLRALTITEDGRLTFWQLDSGEAILETQISENPTAFAKSVS CCCCCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCHHHHHHHHH ALDSYGFVSQQGLVTLFKPRFNSSLAKSVQRPEVEIYAPSFDFRLAAQGSDIARFAFSNV HHHHCCCCCCCCCEEEECCCCCHHHHHHHCCCCEEEECCCCCEEEECCCCCHHHHHHCCC EPSPTLTWLTNDGRVHVRWQQSVQGEWVQRDFQFATSFDAASQLLITPDGETLYVRSGSE CCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCE LVVAKKRDEQFVVREIVDLTLGDQKHSVRQIDLLAGAYSLLVTHNDGRVSQWFDTRQQNQ EEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHH RKLTHIRDFKLASEVQFLLPDTHRKGFYSFYTNGTLQSHYTTSEKLALFLRAYQQAPQMA HHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCEEECCCCCHHHHHHHHHHHHHCCCHH AMSNNEQYLLTYFPERLTLATVDNPYPEISLSSLWQKVWYEGYPEPEFVWQSTSASDDFE HHCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCC AKFSIVPIAFGTIKAALFAMLFSVPIAVLGAIYTGYFMAPKMRRIVKPSIELMEAMPTVI CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHH IGFLAGLWFAPIVEQHLISVVLLMVVLPLSTVFIGGLWTLLPATIRHRIPNGWHALILIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH SMVLVVALGMQFAPELETLFFAGDIRLFLSQHGIGFDQRNAMVVGLAMGFAVIPTIFTIA HHHHHHHHCCCCCCCHHHEEEECHHEEEEHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHH EDAIFSVPKHLSDGSLALGATAWQTLTHVVILTASPGIFSAIMMGLGRAVGETMIVLMAT HHHHHHCCCCCCCCCEEECHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEEC GNTPLMDWNILEGMRTLSATIAVELPESEVGSSHFRLLFLAALLLFVFTFAVNSLAEWVR CCCCCCCHHHHHHHHHHEEEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLRDKYRAL HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]