| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is pstA [H]
Identifier: 27363929
GI number: 27363929
Start: 457208
End: 458878
Strand: Reverse
Name: pstA [H]
Synonym: VV1_0462
Alternate gene names: 27363929
Gene position: 458878-457208 (Counterclockwise)
Preceding gene: 27363930
Following gene: 27363928
Centisome position: 13.98
GC content: 48.77
Gene sequence:
>1671_bases GTGCTGAAATGGATTCGTTCAGGAGCGCCGTGGATTTGGCTGACAGGGGGAGCGGTCAGCATCAGCTTGCTTTCGGTGTT GGCACTGCTGCTTTTGATTGGTTGGAAGGGGCTTAATTACTTCTGGCCTGCGCCTGTCTATCAGTGGACGATAGTAAAAA CCTCACCTCAGTTGTCTCCACAAACATCGGTTGGAAGCCGTGTGATTGGCCAGGTTTATCAGCGAAACCAAGTGGACTAT TCGCAACTGCCGCCATCTTTACAGGCTATTGTGCAAGATGAGCAAGAAGCGGTGCGTTTGAAAATCAAAGTGGCGAATCG AGGTTTGTATCCCTCCGAATTTATTTCGGTGTTGGAGTCGCAACTCAGTGAACCCACAACTCCGGAAGAGATTGTTGTGT TTGAACGCAGCAGTGGCGGCGATTTCTATGGCCGCTACTTAGCGTTTCGTGATGGCGATATACAGACTGACGAGAATATC TTCCCATTGTTGCGAGACAAGCTCGAATACGCTGAACGTTTACGTGAAGAAATTGCGCTGGTGGTTGAGCAAAACATCAA ACCGTTAAGTTGGAAATTGGAACAGCTCCGTCTTGATAAGCGGCGCAAAGAGCTCAATGGCACGTTGAGCTCCGAGTATT TGCAGCAATATCAAGCGGAACGCGAACACTATGAACAGGAGTTAGCCAACTACGACCAGCAGCTTGACGGATTACGTTTG CAACTCACGGGTTACACGCTGCTGGTGGAAGAAATGAGTGGTAATGTGATCTCTATTCCTCTCAGTGAAATTTTGGATTT TTGGCAGCCAAACAAAATGAATGTTGGCGATAAAATTGTGCACTGGGGGAGAGAAATTTGGAAATTCCTCTCAGAAAATC CACGAGATTCCAACTCGGCAGGTGGCGTCTTTCCTGCCATATTTGGTACTGTGTTCCTTGTGTTGATCATGTCGATTATT GTGATGCCGCTGGGGGTTATTGCTGCCATCTATCTGCATGAGTACGCCAAAAATAACGCTTTTACACGAGTCATCCGTAT CGCGGTCATTAATCTTGCCGGTGTGCCTTCCATTGTGTACGGCGTTTTTGGCTTAGGCTTTTTTGTTTACACCATCGGTA GTTCAATTGATAACCTGTTTTATGCAGAGCGCCTTCCTGCTCCAACCTTTGGTACACCTGGGCTGTTGTGGTCTGCACTG ACCTTAGCCGTATTGACGCTGCCCGTGGTCATCGTGACCACTGAAGAGGGCCTAACACGCATTCCTAACTCGGTTCGACA CGGCTCACTTGCGCTTGGAGCGACGCAATTTGAGACGTTGTGGCGCGTGGTGTTGCCGATGGCGACTCCCGCTATCATTA CGGGATTGATTTTGGCGATTGCACGGGCGGCAGGAGAAGTAGCGCCGCTGATGTTGGTTGGTGTGGTTAAGTTAGCGTCC AGCTTACCCGTGGATGGCCAGTTTCCTTACATTCATCTTGAGCGTAAGTTTATGCACCTTGGCTTTCATATCTACGATGT GGGCTTCCAAACGTCGAACATCGAAGCGGCGCGACCACTGGTGTATGCCACGTCCTTTTTGTTGGTGACGGTCATTGTCG GTTTGAACTTAACGGCTATCAGTATCCGCAATAATTTACGCGAAAAATATCGAACATTGGGGCAAGACTAA
Upstream 100 bases:
>100_bases TTTCACCTTCGCCGTCAACTCGCTGGCCGAGTGGGTACGCCAAAGATTAAGAGATAAATATCGTGCGCTGTGATCATAGT CGAATGTTGGGAGAGCTAGC
Downstream 100 bases:
>100_bases GATGTATTCTTTCAATGACACATTGGGCTATCACGCCCCTTTAGATGTGAATAATCTGCCTGACGATAAAACGGCCATTA CGATTGAGAACTTGGATCTG
Product: phosphate ABC transporter permease PstA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MLKWIRSGAPWIWLTGGAVSISLLSVLALLLLIGWKGLNYFWPAPVYQWTIVKTSPQLSPQTSVGSRVIGQVYQRNQVDY SQLPPSLQAIVQDEQEAVRLKIKVANRGLYPSEFISVLESQLSEPTTPEEIVVFERSSGGDFYGRYLAFRDGDIQTDENI FPLLRDKLEYAERLREEIALVVEQNIKPLSWKLEQLRLDKRRKELNGTLSSEYLQQYQAEREHYEQELANYDQQLDGLRL QLTGYTLLVEEMSGNVISIPLSEILDFWQPNKMNVGDKIVHWGREIWKFLSENPRDSNSAGGVFPAIFGTVFLVLIMSII VMPLGVIAAIYLHEYAKNNAFTRVIRIAVINLAGVPSIVYGVFGLGFFVYTIGSSIDNLFYAERLPAPTFGTPGLLWSAL TLAVLTLPVVIVTTEEGLTRIPNSVRHGSLALGATQFETLWRVVLPMATPAIITGLILAIARAAGEVAPLMLVGVVKLAS SLPVDGQFPYIHLERKFMHLGFHIYDVGFQTSNIEAARPLVYATSFLLVTVIVGLNLTAISIRNNLREKYRTLGQD
Sequences:
>Translated_556_residues MLKWIRSGAPWIWLTGGAVSISLLSVLALLLLIGWKGLNYFWPAPVYQWTIVKTSPQLSPQTSVGSRVIGQVYQRNQVDY SQLPPSLQAIVQDEQEAVRLKIKVANRGLYPSEFISVLESQLSEPTTPEEIVVFERSSGGDFYGRYLAFRDGDIQTDENI FPLLRDKLEYAERLREEIALVVEQNIKPLSWKLEQLRLDKRRKELNGTLSSEYLQQYQAEREHYEQELANYDQQLDGLRL QLTGYTLLVEEMSGNVISIPLSEILDFWQPNKMNVGDKIVHWGREIWKFLSENPRDSNSAGGVFPAIFGTVFLVLIMSII VMPLGVIAAIYLHEYAKNNAFTRVIRIAVINLAGVPSIVYGVFGLGFFVYTIGSSIDNLFYAERLPAPTFGTPGLLWSAL TLAVLTLPVVIVTTEEGLTRIPNSVRHGSLALGATQFETLWRVVLPMATPAIITGLILAIARAAGEVAPLMLVGVVKLAS SLPVDGQFPYIHLERKFMHLGFHIYDVGFQTSNIEAARPLVYATSFLLVTVIVGLNLTAISIRNNLREKYRTLGQD >Mature_556_residues MLKWIRSGAPWIWLTGGAVSISLLSVLALLLLIGWKGLNYFWPAPVYQWTIVKTSPQLSPQTSVGSRVIGQVYQRNQVDY SQLPPSLQAIVQDEQEAVRLKIKVANRGLYPSEFISVLESQLSEPTTPEEIVVFERSSGGDFYGRYLAFRDGDIQTDENI FPLLRDKLEYAERLREEIALVVEQNIKPLSWKLEQLRLDKRRKELNGTLSSEYLQQYQAEREHYEQELANYDQQLDGLRL QLTGYTLLVEEMSGNVISIPLSEILDFWQPNKMNVGDKIVHWGREIWKFLSENPRDSNSAGGVFPAIFGTVFLVLIMSII VMPLGVIAAIYLHEYAKNNAFTRVIRIAVINLAGVPSIVYGVFGLGFFVYTIGSSIDNLFYAERLPAPTFGTPGLLWSAL TLAVLTLPVVIVTTEEGLTRIPNSVRHGSLALGATQFETLWRVVLPMATPAIITGLILAIARAAGEVAPLMLVGVVKLAS SLPVDGQFPYIHLERKFMHLGFHIYDVGFQTSNIEAARPLVYATSFLLVTVIVGLNLTAISIRNNLREKYRTLGQD
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=257, Percent_Identity=29.9610894941634, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1790164, Length=230, Percent_Identity=30, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 62257; Mature: 62257
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKWIRSGAPWIWLTGGAVSISLLSVLALLLLIGWKGLNYFWPAPVYQWTIVKTSPQLSP CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCC QTSVGSRVIGQVYQRNQVDYSQLPPSLQAIVQDEQEAVRLKIKVANRGLYPSEFISVLES CHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCHHHEEEEEEECCCCCCHHHHHHHHHH QLSEPTTPEEIVVFERSSGGDFYGRYLAFRDGDIQTDENIFPLLRDKLEYAERLREEIAL HHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VVEQNIKPLSWKLEQLRLDKRRKELNGTLSSEYLQQYQAEREHYEQELANYDQQLDGLRL HHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE QLTGYTLLVEEMSGNVISIPLSEILDFWQPNKMNVGDKIVHWGREIWKFLSENPRDSNSA EEECEEEEEEECCCCEEEECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC GGVFPAIFGTVFLVLIMSIIVMPLGVIAAIYLHEYAKNNAFTRVIRIAVINLAGVPSIVY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHH GVFGLGFFVYTIGSSIDNLFYAERLPAPTFGTPGLLWSALTLAVLTLPVVIVTTEEGLTR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCHHH IPNSVRHGSLALGATQFETLWRVVLPMATPAIITGLILAIARAAGEVAPLMLVGVVKLAS CCCHHCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH SLPVDGQFPYIHLERKFMHLGFHIYDVGFQTSNIEAARPLVYATSFLLVTVIVGLNLTAI CCCCCCCCCEEEEEHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE SIRNNLREKYRTLGQD HHHHHHHHHHHHCCCC >Mature Secondary Structure MLKWIRSGAPWIWLTGGAVSISLLSVLALLLLIGWKGLNYFWPAPVYQWTIVKTSPQLSP CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCC QTSVGSRVIGQVYQRNQVDYSQLPPSLQAIVQDEQEAVRLKIKVANRGLYPSEFISVLES CHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCHHHEEEEEEECCCCCCHHHHHHHHHH QLSEPTTPEEIVVFERSSGGDFYGRYLAFRDGDIQTDENIFPLLRDKLEYAERLREEIAL HHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VVEQNIKPLSWKLEQLRLDKRRKELNGTLSSEYLQQYQAEREHYEQELANYDQQLDGLRL HHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE QLTGYTLLVEEMSGNVISIPLSEILDFWQPNKMNVGDKIVHWGREIWKFLSENPRDSNSA EEECEEEEEEECCCCEEEECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC GGVFPAIFGTVFLVLIMSIIVMPLGVIAAIYLHEYAKNNAFTRVIRIAVINLAGVPSIVY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHH GVFGLGFFVYTIGSSIDNLFYAERLPAPTFGTPGLLWSALTLAVLTLPVVIVTTEEGLTR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCHHH IPNSVRHGSLALGATQFETLWRVVLPMATPAIITGLILAIARAAGEVAPLMLVGVVKLAS CCCHHCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH SLPVDGQFPYIHLERKFMHLGFHIYDVGFQTSNIEAARPLVYATSFLLVTVIVGLNLTAI CCCCCCCCCEEEEEHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE SIRNNLREKYRTLGQD HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]