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The map label for this gene is yajC [H]

Identifier: 27363912

GI number: 27363912

Start: 440248

End: 440577

Strand: Reverse

Name: yajC [H]

Synonym: VV1_0444

Alternate gene names: 27363912

Gene position: 440577-440248 (Counterclockwise)

Preceding gene: 27363913

Following gene: 161501848

Centisome position: 13.42

GC content: 43.03

Gene sequence:

>330_bases
ATGTTTATCTCTCAAGCTCACGCAGCAGCAGAAGGCGCACAACAAGGCGGCATGTTCGAAATGCTCATCATGTTGGGTAT
GTTCGGTGTGATTTTCTACTTCATGATTTACCGTCCACAAGCGAAACGTGTTAAAGAGCACAAGAGCCTAATGGCATCCA
TGGGTAAAGGTGATGAAGTTCTGACCAATGGTGGTCTTGTGGGTAAAATCACTAAGATTGCAGAAGACAATGACTTCGTG
ACAATCGAACTTAACCCAAACAACGAAGTTGTGATCAAAAAAGACTTCGTTACCGCTGTGCTACCAAAAGGTACGCTTAA
ATCTCTATAA

Upstream 100 bases:

>100_bases
AGTGTTACGCCATCTTGTTTTTGTGAGTGAACTCGCTTGAAAATGAGGTGGCGTTACCCAATTTATTGGATTATTAATAA
AAATTAATGAGGATGTTTTA

Downstream 100 bases:

>100_bases
AACAGCTAGAGGATCCTCGCTGTGCTGAACCGTTATCCTTTATGGAAGTACTTGATGGTTATGTTTGCCATTGCCATCGC
TGCCTTGTACGCACTTCCAA

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MFISQAHAAAEGAQQGGMFEMLIMLGMFGVIFYFMIYRPQAKRVKEHKSLMASMGKGDEVLTNGGLVGKITKIAEDNDFV
TIELNPNNEVVIKKDFVTAVLPKGTLKSL

Sequences:

>Translated_109_residues
MFISQAHAAAEGAQQGGMFEMLIMLGMFGVIFYFMIYRPQAKRVKEHKSLMASMGKGDEVLTNGGLVGKITKIAEDNDFV
TIELNPNNEVVIKKDFVTAVLPKGTLKSL
>Mature_109_residues
MFISQAHAAAEGAQQGGMFEMLIMLGMFGVIFYFMIYRPQAKRVKEHKSLMASMGKGDEVLTNGGLVGKITKIAEDNDFV
TIELNPNNEVVIKKDFVTAVLPKGTLKSL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=108, Percent_Identity=62.962962962963, Blast_Score=138, Evalue=9e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11968; Mature: 11968

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFISQAHAAAEGAQQGGMFEMLIMLGMFGVIFYFMIYRPQAKRVKEHKSLMASMGKGDEV
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEE
LTNGGLVGKITKIAEDNDFVTIELNPNNEVVIKKDFVTAVLPKGTLKSL
EECCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCEEECCCCCCCCCC
>Mature Secondary Structure
MFISQAHAAAEGAQQGGMFEMLIMLGMFGVIFYFMIYRPQAKRVKEHKSLMASMGKGDEV
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEE
LTNGGLVGKITKIAEDNDFVTIELNPNNEVVIKKDFVTAVLPKGTLKSL
EECCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]