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The map label for this gene is ybgI [C]

Identifier: 27363646

GI number: 27363646

Start: 153120

End: 153878

Strand: Reverse

Name: ybgI [C]

Synonym: VV1_0163

Alternate gene names: 27363646

Gene position: 153878-153120 (Counterclockwise)

Preceding gene: 27363648

Following gene: 27363644

Centisome position: 4.69

GC content: 46.11

Gene sequence:

>759_bases
ATGAACAACCTCGAACTAGAAAAAATCTTAAATGAGAAACTGACCCCCCAGTTGATTAAAGATTACTGCCCAAATGGCCT
GCAAATCGAAGGCAGTGAGACGATAAAAAAAATCATCACCGGTGTGACCGCTTCTCAAGCGTTAATCGATAAAGCGGTTG
AGCTCAATGCCGATGCGCTGCTTGTGCACCACGGCTATTTTTGGAAAGGTGAAGCTGAGCCTATCCGTGGCATGAAAGGA
AAACGCGTCCGCACTCTGATTAAAAATGATCTCAACTTATTTGCCTATCACTTGCCTCTCGACATTCACCCGGAGCTCGG
TAACAACGCTGAGCTGGCACGTTTGCTTGAGATAAAGGTTGAGGGTGGTTTAGAAGGGCATCCTCAATCCGTGGCCATGT
TTGGGCGCCTCAAACAACCGCTTACAGGGGCTGAATTTGCCCAAAAAATAGCATCTGCGCTTAACCGCGAACCTTTGCAC
ATTGCCCCAGAAAATCGTCATAAAATGATTGAAACGGTAGGTTGGTGTACTGGTGGTGGACAAGATTACATTGAGCTTGC
TGCACAACATGGCCTAGATGCTTTTATCTCTGGCGAAATTTCAGAGCGAACCACTTACAGTGCCCGAGAGCTAGATATCC
ATTACTATGCCGCTGGCCATCATGCTACTGAGCGTTACGGAATTAAGGCGCTTGGTGAATGGTTGGTACAACAACACCAA
TTGGATGTTGAATTTATTGATATCGATAATCCGGTATAG

Upstream 100 bases:

>100_bases
CAGTTGTGATTCCATCATTGTGCTCGAGGTTGGATCCGATATTGTATTGCCGACAAGCTTGAGTATACACTTTGCGTGTA
ACTTAAGTCTGGAATCTAAG

Downstream 100 bases:

>100_bases
GCCCAATACCATAAAGCCACAAACAAAAAGGGTTGAGACCATGTCTCAACCCTTTTTAGTTTTAACACTGTGCGTATTAC
TCGCGTTCGTGCATAGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNNLELEKILNEKLTPQLIKDYCPNGLQIEGSETIKKIITGVTASQALIDKAVELNADALLVHHGYFWKGEAEPIRGMKG
KRVRTLIKNDLNLFAYHLPLDIHPELGNNAELARLLEIKVEGGLEGHPQSVAMFGRLKQPLTGAEFAQKIASALNREPLH
IAPENRHKMIETVGWCTGGGQDYIELAAQHGLDAFISGEISERTTYSARELDIHYYAAGHHATERYGIKALGEWLVQQHQ
LDVEFIDIDNPV

Sequences:

>Translated_252_residues
MNNLELEKILNEKLTPQLIKDYCPNGLQIEGSETIKKIITGVTASQALIDKAVELNADALLVHHGYFWKGEAEPIRGMKG
KRVRTLIKNDLNLFAYHLPLDIHPELGNNAELARLLEIKVEGGLEGHPQSVAMFGRLKQPLTGAEFAQKIASALNREPLH
IAPENRHKMIETVGWCTGGGQDYIELAAQHGLDAFISGEISERTTYSARELDIHYYAAGHHATERYGIKALGEWLVQQHQ
LDVEFIDIDNPV
>Mature_252_residues
MNNLELEKILNEKLTPQLIKDYCPNGLQIEGSETIKKIITGVTASQALIDKAVELNADALLVHHGYFWKGEAEPIRGMKG
KRVRTLIKNDLNLFAYHLPLDIHPELGNNAELARLLEIKVEGGLEGHPQSVAMFGRLKQPLTGAEFAQKIASALNREPLH
IAPENRHKMIETVGWCTGGGQDYIELAAQHGLDAFISGEISERTTYSARELDIHYYAAGHHATERYGIKALGEWLVQQHQ
LDVEFIDIDNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=251, Percent_Identity=57.7689243027888, Blast_Score=299, Evalue=1e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 28115; Mature: 28115

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLELEKILNEKLTPQLIKDYCPNGLQIEGSETIKKIITGVTASQALIDKAVELNADAL
CCCCHHHHHHHHCCCHHHHHHHCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCEE
LVHHGYFWKGEAEPIRGMKGKRVRTLIKNDLNLFAYHLPLDIHPELGNNAELARLLEIKV
EEECCEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEECCEEECCCCCCCHHHEEEEEEEE
EGGLEGHPQSVAMFGRLKQPLTGAEFAQKIASALNREPLHIAPENRHKMIETVGWCTGGG
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCC
QDYIELAAQHGLDAFISGEISERTTYSARELDIHYYAAGHHATERYGIKALGEWLVQQHQ
HHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC
LDVEFIDIDNPV
CCEEEEECCCCC
>Mature Secondary Structure
MNNLELEKILNEKLTPQLIKDYCPNGLQIEGSETIKKIITGVTASQALIDKAVELNADAL
CCCCHHHHHHHHCCCHHHHHHHCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCEE
LVHHGYFWKGEAEPIRGMKGKRVRTLIKNDLNLFAYHLPLDIHPELGNNAELARLLEIKV
EEECCEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEECCEEECCCCCCCHHHEEEEEEEE
EGGLEGHPQSVAMFGRLKQPLTGAEFAQKIASALNREPLHIAPENRHKMIETVGWCTGGG
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCC
QDYIELAAQHGLDAFISGEISERTTYSARELDIHYYAAGHHATERYGIKALGEWLVQQHQ
HHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC
LDVEFIDIDNPV
CCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]