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The map label for this gene is dctP [H]

Identifier: 27363519

GI number: 27363519

Start: 34956

End: 35954

Strand: Reverse

Name: dctP [H]

Synonym: VV1_0030

Alternate gene names: 27363519

Gene position: 35954-34956 (Counterclockwise)

Preceding gene: 27363520

Following gene: 27363518

Centisome position: 1.1

GC content: 48.85

Gene sequence:

>999_bases
ATGTTAAAGCCTCTAACCCTACTTGCTGCTTCCGTGCTTGCTGTCACCAGTTTCAATGCGGCGGCCAACTGTGACCCAGG
CGAGATCGTCATCAAGTTCAGCCACGTCACCAATACCGATAAGCACCCGAAAGGGATTGCAGCATCACTACTGGAAAAAC
GCGTGAACGAAGAGATGAATGGCAAAGCGTGTATGCAGGTTTACCCAAACTCAACACTGTACGATGACGACAAAGTGTTA
GAAGCCATGCTAAACGGCGATGTTCAATTGGCGGCCCCTTCTCTTTCCAAGTTTGAAAAATTCACCAAGAAATATCGCAT
CTTTGACCTGCCATTCCTGTTTGAAGATGTCGACGCGGTTGACCGTTTCCAAAACTCAGACGCGGGCGTGAAGTTGAAAA
ATGCCATGAATCGTCGTGGTGTGCGTGGGTTAGAGTTCTGGCACAACGGCATGAAGCAAATTTCAGCCAGCAAGCCACTG
ATTTCGCCAGCGGACGCCAAAGGATTGAAATTCCGCGTGCAAGCGTCTGATGTGTTGGTTGCTCAGTTTGAACAACTGGG
TGCGAACCCGCAAAAAATGTCGTTTGCTGAAGTGTACGGCGGGCTGCAAACCAAGGTTATTGATGGTCAGGAAAACACTT
GGTCTAACATCTACGGTAAGAAATTCTTTGAAGTACAGGATGGTATTACTGAAACCAACCACGGCATTTTGGATTACCTA
GTCGTGACCTCAAGCAAGTGGTGGGATGGCCTGCCTGCGGATGTGCGTGACCAGTTCGCGACCATCCTAAAAGAAGTGAC
AGAGCAACGTAACGCTGAGTCCAACAAGGTTGAGTTAGCCAACAAGCAGTACGTGATTGAAGCGGGGGGTGTGGTGCGCA
CCTTGACGCCAGAGCAACGTGAAGCGTGGGTAACGGCGTTGAAACCTGTTTGGAAGAAATTTGAGAAAGACATCGGTTCA
GATCTGATTGATGCAGCATTGGCGTCAAACAAACAATAA

Upstream 100 bases:

>100_bases
CTATTTGAATATTATTTAGTTTTTTTATTGGTCTGGTTATTGCTCTAACAGAAGTATCGCACCCAAAGATGGGGCGGTTC
GATTAACAAGGAGAAGAATA

Downstream 100 bases:

>100_bases
ATAAGAACGGGCTCTGACGGTCGAGTCAGAGCCCAGTTTTTAGCACAATAATGAGCGAATCGATTATGGAACAATCACTT
TTGGCAAAAATTGGTCACTT

Product: TRAP-type C4-dicarboxylate transport system, periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLKPLTLLAASVLAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVYPNSTLYDDDKVL
EAMLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQNSDAGVKLKNAMNRRGVRGLEFWHNGMKQISASKPL
ISPADAKGLKFRVQASDVLVAQFEQLGANPQKMSFAEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGITETNHGILDYL
VVTSSKWWDGLPADVRDQFATILKEVTEQRNAESNKVELANKQYVIEAGGVVRTLTPEQREAWVTALKPVWKKFEKDIGS
DLIDAALASNKQ

Sequences:

>Translated_332_residues
MLKPLTLLAASVLAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVYPNSTLYDDDKVL
EAMLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQNSDAGVKLKNAMNRRGVRGLEFWHNGMKQISASKPL
ISPADAKGLKFRVQASDVLVAQFEQLGANPQKMSFAEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGITETNHGILDYL
VVTSSKWWDGLPADVRDQFATILKEVTEQRNAESNKVELANKQYVIEAGGVVRTLTPEQREAWVTALKPVWKKFEKDIGS
DLIDAALASNKQ
>Mature_332_residues
MLKPLTLLAASVLAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVYPNSTLYDDDKVL
EAMLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQNSDAGVKLKNAMNRRGVRGLEFWHNGMKQISASKPL
ISPADAKGLKFRVQASDVLVAQFEQLGANPQKMSFAEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGITETNHGILDYL
VVTSSKWWDGLPADVRDQFATILKEVTEQRNAESNKVELANKQYVIEAGGVVRTLTPEQREAWVTALKPVWKKFEKDIGS
DLIDAALASNKQ

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=304, Percent_Identity=31.25, Blast_Score=138, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36938; Mature: 36938

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPLTLLAASVLAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMN
CCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
GKACMQVYPNSTLYDDDKVLEAMLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAV
CCEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHEEEECCHHHHHHHHH
DRFQNSDAGVKLKNAMNRRGVRGLEFWHNGMKQISASKPLISPADAKGLKFRVQASDVLV
HHHCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHH
AQFEQLGANPQKMSFAEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGITETNHGILDYL
HHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE
VVTSSKWWDGLPADVRDQFATILKEVTEQRNAESNKVELANKQYVIEAGGVVRTLTPEQR
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCEEEECCCHHH
EAWVTALKPVWKKFEKDIGSDLIDAALASNKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKPLTLLAASVLAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMN
CCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
GKACMQVYPNSTLYDDDKVLEAMLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAV
CCEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHEEEECCHHHHHHHHH
DRFQNSDAGVKLKNAMNRRGVRGLEFWHNGMKQISASKPLISPADAKGLKFRVQASDVLV
HHHCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHH
AQFEQLGANPQKMSFAEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGITETNHGILDYL
HHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE
VVTSSKWWDGLPADVRDQFATILKEVTEQRNAESNKVELANKQYVIEAGGVVRTLTPEQR
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCEEEECCCHHH
EAWVTALKPVWKKFEKDIGSDLIDAALASNKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]