| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is yfiP [C]
Identifier: 27363504
GI number: 27363504
Start: 16924
End: 17532
Strand: Reverse
Name: yfiP [C]
Synonym: VV1_0015
Alternate gene names: 27363504
Gene position: 17532-16924 (Counterclockwise)
Preceding gene: 326423649
Following gene: 27363501
Centisome position: 0.53
GC content: 44.66
Gene sequence:
>609_bases ATGTCTCGGTATTGTTCTCAATGTGGTAAAGCGAAAAAAGCGTGTATTTGTCAGTGGATAGAGTCTCTTGCCTCAGATGT GGAACTTATCATTCTACAGCATCCGAGTGAAGAGCATCGCCCACTTGGCACGGCTCGAATTCTCGATTTGTCTTTGGCTA GCTGTCGCTTGTTCATTGGAGAAGACTTTTCGCAACACGCTGAGCTCAATCAGTTGCTAAGCGATGAATCCTATCACCAT TGGGTGTTGTTTCCGAATGAACAAGCCGTCACTGTGGAACAAGTTGCTCAATCTGATGACAGTAACATGCGTCGTCTGCG CTTTATTCTCCTCGATGGTACGTGGAAGAAAGCGTTTAAAATCCGGCAACTTTCAAGCAATTTGCAAGTGCTGCCGTGTG TACAATTACCAGACAATCTCACTGGAAACTACCGTATCCGAAAATCGCCTAGTGACAATGCGCTTTCCACTGTCGAGGCC GGTTTTCACATTCTCAGTTATTTTCAGCCTGAAAACGATTTTACACCCTTAATTACGGCATTTGACAAGATGATCGAGTT TCAAATTGCGCAAATGCCACCTGGTGTGTTTGAACGAAACTATCGTTAG
Upstream 100 bases:
>100_bases TCGCTTGGCGATGCCACTCCGTCCAATCAGACAATAATGGCTGCTGAAGCAATAGACAAAGCACGCTGGTTATCGTCAGA AAAATAGTAAGGTTCACAGT
Downstream 100 bases:
>100_bases CGATGGCCAGATAGAGCGTTGTTAATGATGTGATGAAAACAACTGTTGGTGCAGTCGCTGCGCATGGCCATCGGTCATCG AAGAAATGTAGTCCGCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: DTW Domain Containing Protein; DTW Domain Protein; Cytoplasmic Protein; Dtw Domain Containing Protein; DTW Protein; DTW Domain; Dtw Domain Protein
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSRYCSQCGKAKKACICQWIESLASDVELIILQHPSEEHRPLGTARILDLSLASCRLFIGEDFSQHAELNQLLSDESYHH WVLFPNEQAVTVEQVAQSDDSNMRRLRFILLDGTWKKAFKIRQLSSNLQVLPCVQLPDNLTGNYRIRKSPSDNALSTVEA GFHILSYFQPENDFTPLITAFDKMIEFQIAQMPPGVFERNYR
Sequences:
>Translated_202_residues MSRYCSQCGKAKKACICQWIESLASDVELIILQHPSEEHRPLGTARILDLSLASCRLFIGEDFSQHAELNQLLSDESYHH WVLFPNEQAVTVEQVAQSDDSNMRRLRFILLDGTWKKAFKIRQLSSNLQVLPCVQLPDNLTGNYRIRKSPSDNALSTVEA GFHILSYFQPENDFTPLITAFDKMIEFQIAQMPPGVFERNYR >Mature_201_residues SRYCSQCGKAKKACICQWIESLASDVELIILQHPSEEHRPLGTARILDLSLASCRLFIGEDFSQHAELNQLLSDESYHHW VLFPNEQAVTVEQVAQSDDSNMRRLRFILLDGTWKKAFKIRQLSSNLQVLPCVQLPDNLTGNYRIRKSPSDNALSTVEAG FHILSYFQPENDFTPLITAFDKMIEFQIAQMPPGVFERNYR
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27734779, Length=190, Percent_Identity=27.8947368421053, Blast_Score=75, Evalue=6e-14, Organism=Escherichia coli, GI87082133, Length=163, Percent_Identity=25.7668711656442, Blast_Score=61, Evalue=4e-11, Organism=Drosophila melanogaster, GI21358337, Length=196, Percent_Identity=30.6122448979592, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23179; Mature: 23047
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYCSQCGKAKKACICQWIESLASDVELIILQHPSEEHRPLGTARILDLSLASCRLFIG CCHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEECCCHHHCCCCHHHHHHHHHHHHEEEEC EDFSQHAELNQLLSDESYHHWVLFPNEQAVTVEQVAQSDDSNMRRLRFILLDGTWKKAFK CCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEEEECCHHHHHH IRQLSSNLQVLPCVQLPDNLTGNYRIRKSPSDNALSTVEAGFHILSYFQPENDFTPLITA HHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH FDKMIEFQIAQMPPGVFERNYR HHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SRYCSQCGKAKKACICQWIESLASDVELIILQHPSEEHRPLGTARILDLSLASCRLFIG CHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEECCCHHHCCCCHHHHHHHHHHHHEEEEC EDFSQHAELNQLLSDESYHHWVLFPNEQAVTVEQVAQSDDSNMRRLRFILLDGTWKKAFK CCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEEEECCHHHHHH IRQLSSNLQVLPCVQLPDNLTGNYRIRKSPSDNALSTVEAGFHILSYFQPENDFTPLITA HHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH FDKMIEFQIAQMPPGVFERNYR HHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA