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The map label for this gene is yrbE [C]

Identifier: 27363501

GI number: 27363501

Start: 12793

End: 13866

Strand: Reverse

Name: yrbE [C]

Synonym: VV1_0011

Alternate gene names: 27363501

Gene position: 13866-12793 (Counterclockwise)

Preceding gene: 27363504

Following gene: 27363500

Centisome position: 0.42

GC content: 42.74

Gene sequence:

>1074_bases
ATGAGCGAGAACAGTTTGGAAATCGAGTTAGATGAAAGCATTACTTCTGAAATTGTTGGAAATTTATGGGAAAAAGCGAA
CAGGATTTTGGATACACATCCAAATTCTGCCATTGTTGTTAATGCGCACAATTTAACTTTTATCGACATATCTGGTATCG
CGTTTTTATCAGATTTACAAACAAGATTTCGTGCGCCTGGTGCTGAAATTTCAATAGTTGGTCTTAAGCCCAGTTTGGCT
GAACTTGTACCGCCAGCCCCGGTGGAAAACAATCCTAGTATTGTCGGTAGAGAAAGAGGTTTTTTTGAGCGCGTTGGGCG
AGCTACAAAAGAAATGCTTATCGATGTCGGTTCTGTGGCTCGGTTTGTTAAAGATTGTGCAGTGGTTTTCAAAATAGGAA
TAAGCCGGAGGAAAAACGTAAATTGGGCGACAGTTTCTGATATTGCATCAAGGGCGGGTGCTGATGCAGTACCAATAATT
ATGTTAATTGGCTTCCTCATGGGTGTTATCATTGCCTTTGAAATAGGCCTAGTAGCTGAGCAATTTGGTGCAGTTCTTTT
TGTGGCGGATGGAATAGGGATATCAATGCTCAGGGAACTGGGCCCATTGATGACTGCTATCGTTTTTGCTGGCCGGACTG
GTGCTGCGTTTGCGGCTGAGATCGGCACTCAGAAAGTGAACGAAGAGATAAATGCACTGCGCACCTTTGGTATCAGCCCC
GTTGAGTTCTTGGTCATACCTCGAATTTATGCTTCTATTCTTGTGCTCCCACTATTAACAGTATTTGCAGACATCATCGG
TGTTTTTGGCGGTGCACTTGTATTGCTGAAGTTCGATATCAGTTTTGTTCAATATTATCATCAATTGCTAAGTGCACTTT
CTATTTGGGATTTTGGATTTGGTTTGATCAAAGCCACGACTTTTGGCTTCATTATCGCTGTTATCGGTTGTGAAAGGGGG
TTAGCTACAGGTCAAGGTTCTACTTCGGTAGGCTTGGCGGCAACCAGTGCAGTGGTGAGTAGTATCATTTGGATAGTGGT
CATTGATGGCTTTTTTACCGTATTACTAACCTGA

Upstream 100 bases:

>100_bases
AAAATTCCTGTCTAGTATAAAGCGATTGTCTAATTATTTGTCAGTCCTCTTAACATATTATACCAAGCATCTATACGCGG
ATAACTTTGAGGAAGAAGTA

Downstream 100 bases:

>100_bases
GGAAGCCTGATGAACTCGAAAATAAATGACCCGAAAAATGATGAGGCGGTCGTAGTAACCGGCTTAAAAATGGGTTACGG
CGAGAAGATCCTACTAGAAA

Product: putative ABC transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSENSLEIELDESITSEIVGNLWEKANRILDTHPNSAIVVNAHNLTFIDISGIAFLSDLQTRFRAPGAEISIVGLKPSLA
ELVPPAPVENNPSIVGRERGFFERVGRATKEMLIDVGSVARFVKDCAVVFKIGISRRKNVNWATVSDIASRAGADAVPII
MLIGFLMGVIIAFEIGLVAEQFGAVLFVADGIGISMLRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALRTFGISP
VEFLVIPRIYASILVLPLLTVFADIIGVFGGALVLLKFDISFVQYYHQLLSALSIWDFGFGLIKATTFGFIIAVIGCERG
LATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLLT

Sequences:

>Translated_357_residues
MSENSLEIELDESITSEIVGNLWEKANRILDTHPNSAIVVNAHNLTFIDISGIAFLSDLQTRFRAPGAEISIVGLKPSLA
ELVPPAPVENNPSIVGRERGFFERVGRATKEMLIDVGSVARFVKDCAVVFKIGISRRKNVNWATVSDIASRAGADAVPII
MLIGFLMGVIIAFEIGLVAEQFGAVLFVADGIGISMLRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALRTFGISP
VEFLVIPRIYASILVLPLLTVFADIIGVFGGALVLLKFDISFVQYYHQLLSALSIWDFGFGLIKATTFGFIIAVIGCERG
LATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLLT
>Mature_356_residues
SENSLEIELDESITSEIVGNLWEKANRILDTHPNSAIVVNAHNLTFIDISGIAFLSDLQTRFRAPGAEISIVGLKPSLAE
LVPPAPVENNPSIVGRERGFFERVGRATKEMLIDVGSVARFVKDCAVVFKIGISRRKNVNWATVSDIASRAGADAVPIIM
LIGFLMGVIIAFEIGLVAEQFGAVLFVADGIGISMLRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALRTFGISPV
EFLVIPRIYASILVLPLLTVFADIIGVFGGALVLLKFDISFVQYYHQLLSALSIWDFGFGLIKATTFGFIIAVIGCERGL
ATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLLT

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=206, Percent_Identity=28.6407766990291, Blast_Score=88, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 38163; Mature: 38032

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENSLEIELDESITSEIVGNLWEKANRILDTHPNSAIVVNAHNLTFIDISGIAFLSDLQ
CCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECHHHHHHHHH
TRFRAPGAEISIVGLKPSLAELVPPAPVENNPSIVGRERGFFERVGRATKEMLIDVGSVA
HHHCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
RFVKDCAVVFKIGISRRKNVNWATVSDIASRAGADAVPIIMLIGFLMGVIIAFEIGLVAE
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QFGAVLFVADGIGISMLRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALRTFGISP
HHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
VEFLVIPRIYASILVLPLLTVFADIIGVFGGALVLLKFDISFVQYYHQLLSALSIWDFGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIKATTFGFIIAVIGCERGLATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLLT
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SENSLEIELDESITSEIVGNLWEKANRILDTHPNSAIVVNAHNLTFIDISGIAFLSDLQ
CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECHHHHHHHHH
TRFRAPGAEISIVGLKPSLAELVPPAPVENNPSIVGRERGFFERVGRATKEMLIDVGSVA
HHHCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
RFVKDCAVVFKIGISRRKNVNWATVSDIASRAGADAVPIIMLIGFLMGVIIAFEIGLVAE
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QFGAVLFVADGIGISMLRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALRTFGISP
HHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
VEFLVIPRIYASILVLPLLTVFADIIGVFGGALVLLKFDISFVQYYHQLLSALSIWDFGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIKATTFGFIIAVIGCERGLATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLLT
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA