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The map label for this gene is ylbK [H]

Identifier: 262192873

GI number: 262192873

Start: 1526380

End: 1528566

Strand: Direct

Name: ylbK [H]

Synonym: BMA10247_A1589

Alternate gene names: 262192873

Gene position: 1526380-1528566 (Clockwise)

Preceding gene: 126446363

Following gene: 126447853

Centisome position: 64.88

GC content: 67.49

Gene sequence:

>2187_bases
ATGCCGGACGGCGGCGGCCCGCACCGGCCGGCGATCGGCCTCGTGCTGTCGGGCGGCGGCGCGCGGGGCTACGCGCATCT
GGGCGTGCTGAAGGTGCTGGAAGCGAACCGGATTCCGGTCGACTGCATCGCCGCGACGAGCATGGGCGCGGTCGTCGGCG
GCCTGTACGCGACCGGCATGACCGCGCAGGACATGCAGCGGCGGCTGTCGCAGGTGAACCTCGCCGACATCGCGTTCGAC
GTGACCGAGCGCTCGGACCTGCCGCAGAAGAAGCGCGAGGACGAACGCCTCTATATCGACAGCCTGACGATCGGCTTCGA
TTCGAAGGGCTTCAAGGCGCCCGTCGGGCTCGTGCAGGGCAACCGGCTGCAGGCGCTCCTCGCGAACTGGACCGCCGCCG
TGCCGACGAACCAGCCGTTCGACCGGCTACCGATCCCGTTCCGAGCGATCGCGACCGATCTGCAGACCGGCCAGAAGGTG
GTGCTCGATCACGGCTCGCTGCCGCTCGCGATCCGCGCGAGCATGGCGCTGCCGGGCCTGTTCTCGCCCGCCGAGATCGA
CGGCCGCGCGCTCGTGGACGGCGGGCTCGTCGGCAACCTGCCCGTCGACGCCGCGCGCGCGATGGGCGCGGACGTCGTGA
TCGCGGTCGACATCGGCTCGCCGCTGCGCCCGCTGGACGCGCTAGCGTCGCCCGCCGACGTGATGCAGCAGATGATCGGC
ATCCTGATCCGGCAGAACGTCGCCGAGCAGCGCAAGCAACTGACGGCGAACGACATCCTGCTGCAGCCGGACCTCGGCAA
GCAGACGTTCACCGATTTTCAGAACGCGAACCAGGCGATCGCCGCGGGCGAGGCCGCCGCCGTCGCCGCGCTGCCGCGGC
TCGCGCGCTACGCGCTGTCGCCCGAGCAATACGAAGCGTATCGGGCCGCCCACGCGCGCCCGCAGCAGCCGATCCGCATC
ACGTCGATCGAGATCCGCACCAACGGCGCGTCGGTGCCCAAGCAGATCGTGCGCAATGCGCTGCACGTGAAGCCGGGCGA
CGTCTACGATCCGCAGGCGGTCAGCGCCGATCTGCTGTCGCTCACGACGAGCGGCAATTTCGAGAACGTCACGCAGCAGA
TCATCAACGAAGGCGACGAGCACCGGCTCGTGATCGACGCGCAGGAGAAGTACTGGGGGCCGAACTTCCTGCTGTTCGGG
CTGGGGATGTCGAGCAGTTCCACCGACGAAGGCGGCTTCCGGCTGCATCTGGGCTACCGGCGGCCCTGGCTCACGCCGTC
CGGCCTCGAATTCCGCGCGGATACGACGCTCGGCAGCGACATGCAGTCGGTGCACGTCGAGTTGCGCCAGCCGCTGTCGA
ACAAGACCGGCTACTACGTCGCGCCGTACGCGGACTACAAGCGGCGGTTCGCGAACCTCTACAATGGGGAAAGCGACGTC
AAGGTCACGCAATACCGGATCCAGACCTCACGTGCAGGGCTCGATCTCGGGCTGCCGCTTGCGCGGCTCGGGGATTTCCG
GATCGGCCTCGCCTATACGCACCTTTCGGCCGCCCCCTCATACAGCCTCCTGCTGGACAGCTGGGTCGACGACGACGGCA
ACTCGCTGTCCTTCCCATCCTGGTACGCACGGCAGGTCAGCGCGCGCGCCCGGCTCGTCATCGACCAGCTCGACGATCCG
CTCTTCCCGCGCAAGGGTTACTTCGCGGAATTCCGCGCCGAACGCTCGCTCGCCACGAGCGAGGACAAGTTCACCGACGT
CTACGGCAAGTTGATGGTCGCCGAGCGCTTCGGCCGGCACAGCGTGAGCGCGAGCGTTGAGGCGGGCAAGAGCTTCGGCG
GCGTGAATCTCAGCAATCCGTTCGGCTACACGCTCGGCGGCTTCCAGCATCTATCGGCGTACGCGGCCGACCAGTTGAGC
GGCGATGCGCTTCTCTATGGACAGGTCACCTACATGAATCAGCTGGCGACGTTCAATGCGTCTCCGATCAAGGCGCTCTA
CCTCGGCGCGAGCGCGGAAGTCGGTAATGTATGGTCGCTCGACCCGGCGTTTCCGAGCGGTCCGCTCAAGCAGAGCTACA
CGTTCTTCACCAGCCTGATCACATCGTTCGGGCCCGTGTACGTCGGTATGGCGTTCGCACCCGGCGGGCGGCGCAACATC
TACTTCCAGCTCGGCCGCACGTATTGA

Upstream 100 bases:

>100_bases
CTCGGCGCCGACGCCCCCCGCCGCCACGCCGGCCGCCGCAGGCGCCTCGGCGTCCACGGCAGCCGCGCCGACGCCGGCCG
CGACGGACACCCTCGTTTGC

Downstream 100 bases:

>100_bases
TCCGCGCACCGTGGATGGTGCCCTGGCGCCGCCGTTTCCGGACACGGCAAGTAACGGACGCTCGAGCGGGCGTCCGCATG
CAGCGAACTGATTCAAGGAA

Product: OMP85 family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 728; Mature: 727

Protein sequence:

>728_residues
MPDGGGPHRPAIGLVLSGGGARGYAHLGVLKVLEANRIPVDCIAATSMGAVVGGLYATGMTAQDMQRRLSQVNLADIAFD
VTERSDLPQKKREDERLYIDSLTIGFDSKGFKAPVGLVQGNRLQALLANWTAAVPTNQPFDRLPIPFRAIATDLQTGQKV
VLDHGSLPLAIRASMALPGLFSPAEIDGRALVDGGLVGNLPVDAARAMGADVVIAVDIGSPLRPLDALASPADVMQQMIG
ILIRQNVAEQRKQLTANDILLQPDLGKQTFTDFQNANQAIAAGEAAAVAALPRLARYALSPEQYEAYRAAHARPQQPIRI
TSIEIRTNGASVPKQIVRNALHVKPGDVYDPQAVSADLLSLTTSGNFENVTQQIINEGDEHRLVIDAQEKYWGPNFLLFG
LGMSSSSTDEGGFRLHLGYRRPWLTPSGLEFRADTTLGSDMQSVHVELRQPLSNKTGYYVAPYADYKRRFANLYNGESDV
KVTQYRIQTSRAGLDLGLPLARLGDFRIGLAYTHLSAAPSYSLLLDSWVDDDGNSLSFPSWYARQVSARARLVIDQLDDP
LFPRKGYFAEFRAERSLATSEDKFTDVYGKLMVAERFGRHSVSASVEAGKSFGGVNLSNPFGYTLGGFQHLSAYAADQLS
GDALLYGQVTYMNQLATFNASPIKALYLGASAEVGNVWSLDPAFPSGPLKQSYTFFTSLITSFGPVYVGMAFAPGGRRNI
YFQLGRTY

Sequences:

>Translated_728_residues
MPDGGGPHRPAIGLVLSGGGARGYAHLGVLKVLEANRIPVDCIAATSMGAVVGGLYATGMTAQDMQRRLSQVNLADIAFD
VTERSDLPQKKREDERLYIDSLTIGFDSKGFKAPVGLVQGNRLQALLANWTAAVPTNQPFDRLPIPFRAIATDLQTGQKV
VLDHGSLPLAIRASMALPGLFSPAEIDGRALVDGGLVGNLPVDAARAMGADVVIAVDIGSPLRPLDALASPADVMQQMIG
ILIRQNVAEQRKQLTANDILLQPDLGKQTFTDFQNANQAIAAGEAAAVAALPRLARYALSPEQYEAYRAAHARPQQPIRI
TSIEIRTNGASVPKQIVRNALHVKPGDVYDPQAVSADLLSLTTSGNFENVTQQIINEGDEHRLVIDAQEKYWGPNFLLFG
LGMSSSSTDEGGFRLHLGYRRPWLTPSGLEFRADTTLGSDMQSVHVELRQPLSNKTGYYVAPYADYKRRFANLYNGESDV
KVTQYRIQTSRAGLDLGLPLARLGDFRIGLAYTHLSAAPSYSLLLDSWVDDDGNSLSFPSWYARQVSARARLVIDQLDDP
LFPRKGYFAEFRAERSLATSEDKFTDVYGKLMVAERFGRHSVSASVEAGKSFGGVNLSNPFGYTLGGFQHLSAYAADQLS
GDALLYGQVTYMNQLATFNASPIKALYLGASAEVGNVWSLDPAFPSGPLKQSYTFFTSLITSFGPVYVGMAFAPGGRRNI
YFQLGRTY
>Mature_727_residues
PDGGGPHRPAIGLVLSGGGARGYAHLGVLKVLEANRIPVDCIAATSMGAVVGGLYATGMTAQDMQRRLSQVNLADIAFDV
TERSDLPQKKREDERLYIDSLTIGFDSKGFKAPVGLVQGNRLQALLANWTAAVPTNQPFDRLPIPFRAIATDLQTGQKVV
LDHGSLPLAIRASMALPGLFSPAEIDGRALVDGGLVGNLPVDAARAMGADVVIAVDIGSPLRPLDALASPADVMQQMIGI
LIRQNVAEQRKQLTANDILLQPDLGKQTFTDFQNANQAIAAGEAAAVAALPRLARYALSPEQYEAYRAAHARPQQPIRIT
SIEIRTNGASVPKQIVRNALHVKPGDVYDPQAVSADLLSLTTSGNFENVTQQIINEGDEHRLVIDAQEKYWGPNFLLFGL
GMSSSSTDEGGFRLHLGYRRPWLTPSGLEFRADTTLGSDMQSVHVELRQPLSNKTGYYVAPYADYKRRFANLYNGESDVK
VTQYRIQTSRAGLDLGLPLARLGDFRIGLAYTHLSAAPSYSLLLDSWVDDDGNSLSFPSWYARQVSARARLVIDQLDDPL
FPRKGYFAEFRAERSLATSEDKFTDVYGKLMVAERFGRHSVSASVEAGKSFGGVNLSNPFGYTLGGFQHLSAYAADQLSG
DALLYGQVTYMNQLATFNASPIKALYLGASAEVGNVWSLDPAFPSGPLKQSYTFFTSLITSFGPVYVGMAFAPGGRRNIY
FQLGRTY

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=217, Percent_Identity=37.7880184331797, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI148727290, Length=217, Percent_Identity=37.7880184331797, Blast_Score=114, Evalue=3e-25,
Organism=Escherichia coli, GI226510936, Length=315, Percent_Identity=28.8888888888889, Blast_Score=107, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71997299, Length=210, Percent_Identity=29.0476190476191, Blast_Score=69, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71997289, Length=210, Percent_Identity=29.0476190476191, Blast_Score=69, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6323581, Length=220, Percent_Identity=34.0909090909091, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 78893; Mature: 78762

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDGGGPHRPAIGLVLSGGGARGYAHLGVLKVLEANRIPVDCIAATSMGAVVGGLYATGM
CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
TAQDMQRRLSQVNLADIAFDVTERSDLPQKKREDERLYIDSLTIGFDSKGFKAPVGLVQG
CHHHHHHHHHHCCHHHEEEECCCCCCCCHHHCCCCEEEEEEEEECCCCCCCCCCCCEECC
NRLQALLANWTAAVPTNQPFDRLPIPFRAIATDLQTGQKVVLDHGSLPLAIRASMALPGL
CHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCC
FSPAEIDGRALVDGGLVGNLPVDAARAMGADVVIAVDIGSPLRPLDALASPADVMQQMIG
CCCCCCCCCEEECCCEECCCCHHHHHHCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHH
ILIRQNVAEQRKQLTANDILLQPDLGKQTFTDFQNANQAIAAGEAAAVAALPRLARYALS
HHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCC
PEQYEAYRAAHARPQQPIRITSIEIRTNGASVPKQIVRNALHVKPGDVYDPQAVSADLLS
HHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHCHHHHE
LTTSGNFENVTQQIINEGDEHRLVIDAQEKYWGPNFLLFGLGMSSSSTDEGGFRLHLGYR
EECCCCHHHHHHHHHCCCCCCEEEEECHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCC
RPWLTPSGLEFRADTTLGSDMQSVHVELRQPLSNKTGYYVAPYADYKRRFANLYNGESDV
CCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCCC
KVTQYRIQTSRAGLDLGLPLARLGDFRIGLAYTHLSAAPSYSLLLDSWVDDDGNSLSFPS
EEEEEEEEHHHCCCCCCCCHHHHCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCH
WYARQVSARARLVIDQLDDPLFPRKGYFAEFRAERSLATSEDKFTDVYGKLMVAERFGRH
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
SVSASVEAGKSFGGVNLSNPFGYTLGGFQHLSAYAADQLSGDALLYGQVTYMNQLATFNA
CCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCC
SPIKALYLGASAEVGNVWSLDPAFPSGPLKQSYTFFTSLITSFGPVYVGMAFAPGGRRNI
CCCEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEE
YFQLGRTY
EEEECCCC
>Mature Secondary Structure 
PDGGGPHRPAIGLVLSGGGARGYAHLGVLKVLEANRIPVDCIAATSMGAVVGGLYATGM
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
TAQDMQRRLSQVNLADIAFDVTERSDLPQKKREDERLYIDSLTIGFDSKGFKAPVGLVQG
CHHHHHHHHHHCCHHHEEEECCCCCCCCHHHCCCCEEEEEEEEECCCCCCCCCCCCEECC
NRLQALLANWTAAVPTNQPFDRLPIPFRAIATDLQTGQKVVLDHGSLPLAIRASMALPGL
CHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCC
FSPAEIDGRALVDGGLVGNLPVDAARAMGADVVIAVDIGSPLRPLDALASPADVMQQMIG
CCCCCCCCCEEECCCEECCCCHHHHHHCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHH
ILIRQNVAEQRKQLTANDILLQPDLGKQTFTDFQNANQAIAAGEAAAVAALPRLARYALS
HHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCC
PEQYEAYRAAHARPQQPIRITSIEIRTNGASVPKQIVRNALHVKPGDVYDPQAVSADLLS
HHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHCHHHHE
LTTSGNFENVTQQIINEGDEHRLVIDAQEKYWGPNFLLFGLGMSSSSTDEGGFRLHLGYR
EECCCCHHHHHHHHHCCCCCCEEEEECHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCC
RPWLTPSGLEFRADTTLGSDMQSVHVELRQPLSNKTGYYVAPYADYKRRFANLYNGESDV
CCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCCC
KVTQYRIQTSRAGLDLGLPLARLGDFRIGLAYTHLSAAPSYSLLLDSWVDDDGNSLSFPS
EEEEEEEEHHHCCCCCCCCHHHHCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCH
WYARQVSARARLVIDQLDDPLFPRKGYFAEFRAERSLATSEDKFTDVYGKLMVAERFGRH
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
SVSASVEAGKSFGGVNLSNPFGYTLGGFQHLSAYAADQLSGDALLYGQVTYMNQLATFNA
CCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCC
SPIKALYLGASAEVGNVWSLDPAFPSGPLKQSYTFFTSLITSFGPVYVGMAFAPGGRRNI
CCCEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEE
YFQLGRTY
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]