Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126446363

Identifier: 126446363

GI number: 126446363

Start: 1524104

End: 1524328

Strand: Direct

Name: 126446363

Synonym: BMA10247_A1585

Alternate gene names: NA

Gene position: 1524104-1524328 (Clockwise)

Preceding gene: 126446427

Following gene: 262192873

Centisome position: 64.78

GC content: 68.44

Gene sequence:

>225_bases
ATGACATACGTGACATACGCGGCGTGCGCGTCGTGCCACCGGCAAAACGGCCAAGGCGCGGGCACGTTCCCGCGGCTCGC
GGGACAGCACGCCGATTATCTGCGGCGGCAGATCGATGTCTTCAAGAACGGCACGCGCGCGAACGCGCCGGTGATGAGCG
CCGTCGCGCATACGCTCGATGGCGACCCGGCGAAGGCCGTCGCGGCGTGGCTGCAATCGCGCTAG

Upstream 100 bases:

>100_bases
TCGGGGGTTCGATGCGGCGAGTCTACGCGGTGCGCCGGCGTATCGTCCACGCATAAGTTATGCGCCCGGCTCGGCATGTG
CGGCGACATGGGCGACATAC

Downstream 100 bases:

>100_bases
CGATCGCGACGCGCGCGCACGGCCGCACGGCCGCTCGGCGGCTCGCGCGGCTCAGCGATTCATGCCGAAATCGCCCGCGT
CCTCGTCGCCTGCGTCGAAC

Product: cytochrome c4 family protein

Products: NA

Alternate protein names: Cytochrome C Signal Peptide Protein; Cytochrome C Family Protein; Cytochrome C

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MTYVTYAACASCHRQNGQGAGTFPRLAGQHADYLRRQIDVFKNGTRANAPVMSAVAHTLDGDPAKAVAAWLQSR

Sequences:

>Translated_74_residues
MTYVTYAACASCHRQNGQGAGTFPRLAGQHADYLRRQIDVFKNGTRANAPVMSAVAHTLDGDPAKAVAAWLQSR
>Mature_73_residues
TYVTYAACASCHRQNGQGAGTFPRLAGQHADYLRRQIDVFKNGTRANAPVMSAVAHTLDGDPAKAVAAWLQSR

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7962; Mature: 7831

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYVTYAACASCHRQNGQGAGTFPRLAGQHADYLRRQIDVFKNGTRANAPVMSAVAHTLD
CCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
GDPAKAVAAWLQSR
CCHHHHHHHHHHCC
>Mature Secondary Structure 
TYVTYAACASCHRQNGQGAGTFPRLAGQHADYLRRQIDVFKNGTRANAPVMSAVAHTLD
CCHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
GDPAKAVAAWLQSR
CCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA