| Definition | Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome. |
|---|---|
| Accession | NC_000964 |
| Length | 4,215,606 |
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The map label for this gene is deaD
Identifier: 255767828
GI number: 255767828
Start: 4015987
End: 4017426
Strand: Reverse
Name: deaD
Synonym: BSU39110
Alternate gene names: 255767828
Gene position: 4017426-4015987 (Counterclockwise)
Preceding gene: 255767829
Following gene: 16080960
Centisome position: 95.3
GC content: 45.76
Gene sequence:
>1440_bases ATGAGTCATTTTAAAAACTATCAAATCAGTCATGACATTTTACGAGCATTGGAAGGACTGGGATATACAGAACCGACCAA GGTGCAGCAGAGTGTGATCCCCGCTGCCCTTGAACGAAAGGATCTTGTCGTCAAATCACAGACAGGAAGCGGGAAAACGG CTTCGTTCGGGATTCCTCTCTGTGAGCTGGCGAATTGGGATGAAAACAAGCCGCAGGCGCTTATTTTAACACCGACCCGT GAGCTTGCGGTGCAAGTAAAGGAAGATATCACGAACATCGGACGATTTAAACGGATCAAAGCGACAGCCGTATTTGGAAA ATCCTCCTTTGATAAACAAAAAGCTGAGCTTAAGCAAAAAAGCCACATTGTTGTCGGCACGCCGGGACGTGTTCTGGATC ATATCGAAAAAGGCACGCTGCCGTTGGATCGTCTCTCTTATTTGGTCATTGATGAAGCGGATGAGATGCTGAATATGGGC TTCATTGAGCAGGTGGAGGCGATTATCAAGCATCTGCCGACTGAGCGTACGACGATGCTGTTTTCAGCGACGCTTCCGCA GGATATCGAGAAGCTGAGCCGTCAATATATGCAAAACCCCGAGCATATCGAGGTCAAAGCGGCCGGCCTAACCACAAGAA ATATTGAACATGCGGTGATTCAAGTAAGAGAAGAGAATAAGTTTTCATTGCTGAAAGATGTGCTGATGACGGAGAATCCC GACAGCTGCATCATTTTCTGCCGAACGAAGGAGCACGTCAATCAGCTGACCGATGAATTGGATGACTTGGGATATCCATG CGATAAAATTCACGGCGGAATGATTCAGGAAGACCGATTCGACGTCATGAATGAATTTAAACGTGGCGAGTACCGTTACT TAGTGGCGACGGATGTCGCCGCGCGCGGGATTGATATTGAAAATATCTCCCTTGTCATCAACTATGATCTGCCGCTTGAA AAAGAAAGCTATGTCCACCGCACGGGCCGAACGGGACGCGCAGGGAACAAAGGAAAGGCCATTTCGTTTGTCACGGCCTT CGAAAAACGGTTTTTAGCCGACATTGAAGAATATATCGGATTTGAAATCCAAAAAATAGAAGCACCTTCTCAAGAGGAAG TGGCAAGGAAGAAACCAGAATTTCTAGCTAAACTGAATGACCGTCCGGAAAGCAAAAAGGACAAAAGCGAAGAGCTGAAT AAAGACATTATGAAGCTGTATTTTAACGGCGGAAAGAAAAAGAAAATCAGAGCCGTTGATTTTGTAGGAACGATTGCCAA AATTGACGGTGTGTCAGCTGACGACATCGGCATCATCACGATCATGGATAACGCCTCATACGTTGAGATTTTAAATGGTA AAGGCCCTCATGTTCTCAAAGTGATGAAGAACACAACCGTCAAAGGGAAACAGCTGAAGGTGAATAAAGCGAATAAATGA
Upstream 100 bases:
>100_bases GGGAATCGCTGGCTTTTAATACATCATTTTTCGACAAAACACATATGCCTTGGTCAATTAGAGTATAATGAGAACATCTG CAAGAGACAGGAGTTTATAC
Downstream 100 bases:
>100_bases TGAATGACCTGCTCCCAGTTAAAGGGGCAGGTCATTTTGCTGCTGGCTGACATCTGTGCTGGTTTCCTCGGGAACAAAGG CAAGAATCACAATACCAATC
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCELANWDENKPQALILTPTR ELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMG FIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDVLMTENP DSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVAARGIDIENISLVINYDLPLE KESYVHRTGRTGRAGNKGKAISFVTAFEKRFLADIEEYIGFEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKSEELN KDIMKLYFNGGKKKKIRAVDFVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLKVMKNTTVKGKQLKVNKANK
Sequences:
>Translated_479_residues MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCELANWDENKPQALILTPTR ELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMG FIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDVLMTENP DSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVAARGIDIENISLVINYDLPLE KESYVHRTGRTGRAGNKGKAISFVTAFEKRFLADIEEYIGFEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKSEELN KDIMKLYFNGGKKKKIRAVDFVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLKVMKNTTVKGKQLKVNKANK >Mature_478_residues SHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCELANWDENKPQALILTPTRE LAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGF IEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDVLMTENPD SCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVAARGIDIENISLVINYDLPLEK ESYVHRTGRTGRAGNKGKAISFVTAFEKRFLADIEEYIGFEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKSEELNK DIMKLYFNGGKKKKIRAVDFVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLKVMKNTTVKGKQLKVNKANK
Specific function: Has a helix-destabilizing activity. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. May function in rRNA maturation and ribosome biogenesis
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain
Homologues:
Organism=Homo sapiens, GI7661920, Length=364, Percent_Identity=39.2857142857143, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI87196351, Length=363, Percent_Identity=40.495867768595, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI301171467, Length=363, Percent_Identity=40.495867768595, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI301171475, Length=363, Percent_Identity=40.495867768595, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI20149629, Length=359, Percent_Identity=37.883008356546, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI41327773, Length=356, Percent_Identity=39.8876404494382, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI169881239, Length=366, Percent_Identity=39.6174863387978, Blast_Score=255, Evalue=8e-68, Organism=Homo sapiens, GI13514809, Length=366, Percent_Identity=39.6174863387978, Blast_Score=255, Evalue=8e-68, Organism=Homo sapiens, GI164664518, Length=367, Percent_Identity=35.149863760218, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI41327771, Length=377, Percent_Identity=36.8700265251989, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI83700235, Length=368, Percent_Identity=37.2282608695652, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI4503529, Length=365, Percent_Identity=37.2602739726027, Blast_Score=238, Evalue=7e-63, Organism=Homo sapiens, GI148613856, Length=354, Percent_Identity=36.4406779661017, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI38201710, Length=354, Percent_Identity=36.4406779661017, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI4758138, Length=365, Percent_Identity=35.3424657534247, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI13129006, Length=392, Percent_Identity=35.7142857142857, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI50659095, Length=387, Percent_Identity=35.1421188630491, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI45446747, Length=363, Percent_Identity=36.6391184573003, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI45446743, Length=363, Percent_Identity=36.6391184573003, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI31542656, Length=381, Percent_Identity=36.2204724409449, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI224593278, Length=359, Percent_Identity=33.1476323119777, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI188035877, Length=362, Percent_Identity=33.1491712707182, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI41327776, Length=359, Percent_Identity=34.2618384401114, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI21071032, Length=378, Percent_Identity=34.6560846560847, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI21040371, Length=379, Percent_Identity=31.9261213720317, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI222352149, Length=357, Percent_Identity=33.3333333333333, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI51094101, Length=361, Percent_Identity=33.7950138504155, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI164419743, Length=361, Percent_Identity=33.7950138504155, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI262118318, Length=337, Percent_Identity=35.9050445103858, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI262231852, Length=337, Percent_Identity=35.9050445103858, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI216548263, Length=337, Percent_Identity=35.9050445103858, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI13518015, Length=337, Percent_Identity=35.9050445103858, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI4758112, Length=379, Percent_Identity=31.6622691292876, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI18375623, Length=379, Percent_Identity=31.6622691292876, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI55749865, Length=362, Percent_Identity=30.3867403314917, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=31.5789473684211, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI8922886, Length=389, Percent_Identity=32.3907455012853, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI13514831, Length=358, Percent_Identity=34.0782122905028, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI6005743, Length=389, Percent_Identity=32.3907455012853, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI41327779, Length=396, Percent_Identity=34.0909090909091, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI164419732, Length=376, Percent_Identity=30.5851063829787, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI256223453, Length=360, Percent_Identity=31.1111111111111, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI62241022, Length=373, Percent_Identity=33.2439678284182, Blast_Score=186, Evalue=6e-47, Organism=Homo sapiens, GI38327634, Length=353, Percent_Identity=33.9943342776204, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI38569503, Length=368, Percent_Identity=31.5217391304348, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI38569505, Length=368, Percent_Identity=31.5217391304348, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI62241024, Length=351, Percent_Identity=33.6182336182336, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI17505907, Length=392, Percent_Identity=29.5918367346939, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI256773275, Length=379, Percent_Identity=27.9683377308707, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI154759257, Length=434, Percent_Identity=27.6497695852535, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI9966805, Length=302, Percent_Identity=33.4437086092715, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI20336298, Length=191, Percent_Identity=36.1256544502618, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI4826686, Length=114, Percent_Identity=43.859649122807, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI110735439, Length=337, Percent_Identity=24.6290801186944, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI169218196, Length=340, Percent_Identity=24.7058823529412, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI87082221, Length=392, Percent_Identity=42.6020408163265, Blast_Score=319, Evalue=3e-88, Organism=Escherichia coli, GI1787605, Length=462, Percent_Identity=36.1471861471861, Blast_Score=299, Evalue=2e-82, Organism=Escherichia coli, GI1787016, Length=375, Percent_Identity=41.0666666666667, Blast_Score=285, Evalue=4e-78, Organism=Escherichia coli, GI1790214, Length=369, Percent_Identity=35.7723577235772, Blast_Score=233, Evalue=2e-62, Organism=Escherichia coli, GI1788930, Length=382, Percent_Identity=32.9842931937173, Blast_Score=201, Evalue=1e-52, Organism=Escherichia coli, GI48994977, Length=374, Percent_Identity=24.8663101604278, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=40.6593406593407, Blast_Score=290, Evalue=8e-79, Organism=Caenorhabditis elegans, GI17507121, Length=364, Percent_Identity=40.3846153846154, Blast_Score=290, Evalue=1e-78, Organism=Caenorhabditis elegans, GI71987143, Length=364, Percent_Identity=36.8131868131868, Blast_Score=275, Evalue=4e-74, Organism=Caenorhabditis elegans, GI17555296, Length=370, Percent_Identity=39.1891891891892, Blast_Score=254, Evalue=8e-68, Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=35.6200527704486, Blast_Score=249, Evalue=3e-66, Organism=Caenorhabditis elegans, GI17510309, Length=406, Percent_Identity=36.6995073891626, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI17510307, Length=406, Percent_Identity=36.6995073891626, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI71995514, Length=406, Percent_Identity=36.6995073891626, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI17552114, Length=363, Percent_Identity=32.2314049586777, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI115533224, Length=333, Percent_Identity=38.1381381381381, Blast_Score=225, Evalue=5e-59, Organism=Caenorhabditis elegans, GI86570094, Length=344, Percent_Identity=37.2093023255814, Blast_Score=224, Evalue=7e-59, Organism=Caenorhabditis elegans, GI71995718, Length=366, Percent_Identity=36.6120218579235, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71982858, Length=348, Percent_Identity=33.9080459770115, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI17507945, Length=380, Percent_Identity=34.7368421052632, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI71999646, Length=417, Percent_Identity=30.9352517985612, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17510559, Length=383, Percent_Identity=31.5926892950392, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI71999644, Length=417, Percent_Identity=30.9352517985612, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17553716, Length=360, Percent_Identity=33.6111111111111, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17509811, Length=354, Percent_Identity=34.180790960452, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI115532546, Length=367, Percent_Identity=32.9700272479564, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI115532548, Length=367, Percent_Identity=32.9700272479564, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17552642, Length=377, Percent_Identity=34.2175066312997, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17537549, Length=369, Percent_Identity=33.3333333333333, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17507881, Length=391, Percent_Identity=33.5038363171356, Blast_Score=191, Evalue=8e-49, Organism=Caenorhabditis elegans, GI17505370, Length=354, Percent_Identity=33.3333333333333, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=31.4363143631436, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=31.266846361186, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17536099, Length=411, Percent_Identity=28.9537712895377, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17536101, Length=411, Percent_Identity=28.9537712895377, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17507641, Length=394, Percent_Identity=31.9796954314721, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17536103, Length=411, Percent_Identity=28.9537712895377, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17508543, Length=389, Percent_Identity=28.5347043701799, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI193206561, Length=342, Percent_Identity=28.0701754385965, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI32564046, Length=379, Percent_Identity=31.9261213720317, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI25148203, Length=404, Percent_Identity=27.970297029703, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI71990816, Length=376, Percent_Identity=31.1170212765957, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI25148291, Length=340, Percent_Identity=29.4117647058824, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17556951, Length=453, Percent_Identity=27.3730684326711, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI193208216, Length=380, Percent_Identity=29.2105263157895, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71997889, Length=373, Percent_Identity=27.0777479892761, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=32.8358208955224, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI25148205, Length=331, Percent_Identity=26.2839879154079, Blast_Score=118, Evalue=6e-27, Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=50.5154639175258, Blast_Score=104, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17566630, Length=342, Percent_Identity=27.1929824561404, Blast_Score=92, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6320224, Length=371, Percent_Identity=39.0835579514825, Blast_Score=268, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6321856, Length=365, Percent_Identity=38.9041095890411, Blast_Score=260, Evalue=3e-70, Organism=Saccharomyces cerevisiae, GI6322912, Length=368, Percent_Identity=38.3152173913043, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6322323, Length=368, Percent_Identity=38.3152173913043, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6324217, Length=342, Percent_Identity=40.0584795321637, Blast_Score=246, Evalue=5e-66, Organism=Saccharomyces cerevisiae, GI6320041, Length=365, Percent_Identity=34.7945205479452, Blast_Score=239, Evalue=9e-64, Organism=Saccharomyces cerevisiae, GI6325138, Length=384, Percent_Identity=36.9791666666667, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6324778, Length=357, Percent_Identity=37.2549019607843, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=37.2881355932203, Blast_Score=225, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6321360, Length=340, Percent_Identity=37.3529411764706, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6324620, Length=387, Percent_Identity=31.266149870801, Blast_Score=209, Evalue=9e-55, Organism=Saccharomyces cerevisiae, GI6321963, Length=378, Percent_Identity=34.3915343915344, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6320119, Length=375, Percent_Identity=34.9333333333333, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6320449, Length=374, Percent_Identity=32.8877005347594, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=34.1666666666667, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6319618, Length=400, Percent_Identity=33.25, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=372, Percent_Identity=32.7956989247312, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=453, Percent_Identity=30.242825607064, Blast_Score=170, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=358, Percent_Identity=30.4469273743017, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=338, Percent_Identity=35.207100591716, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=27.536231884058, Blast_Score=156, Evalue=8e-39, Organism=Saccharomyces cerevisiae, GI6320400, Length=424, Percent_Identity=28.7735849056604, Blast_Score=147, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6322876, Length=430, Percent_Identity=26.9767441860465, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6320173, Length=238, Percent_Identity=31.5126050420168, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6321374, Length=403, Percent_Identity=23.3250620347395, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6324366, Length=171, Percent_Identity=32.1637426900585, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6323844, Length=102, Percent_Identity=29.4117647058824, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI24645031, Length=364, Percent_Identity=39.010989010989, Blast_Score=278, Evalue=8e-75, Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=38.4196185286104, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=38.4196185286104, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=38.4196185286104, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=38.4196185286104, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI24642151, Length=356, Percent_Identity=37.6404494382022, Blast_Score=252, Evalue=3e-67, Organism=Drosophila melanogaster, GI24585582, Length=362, Percent_Identity=36.1878453038674, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI24584994, Length=383, Percent_Identity=36.8146214099217, Blast_Score=241, Evalue=7e-64, Organism=Drosophila melanogaster, GI24584399, Length=360, Percent_Identity=35, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI28574962, Length=343, Percent_Identity=36.1516034985423, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24644487, Length=387, Percent_Identity=35.4005167958656, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI45551833, Length=387, Percent_Identity=35.4005167958656, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644485, Length=387, Percent_Identity=35.4005167958656, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644483, Length=387, Percent_Identity=35.4005167958656, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI281361218, Length=387, Percent_Identity=35.4005167958656, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644481, Length=387, Percent_Identity=35.4005167958656, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644479, Length=387, Percent_Identity=35.4005167958656, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI17985987, Length=385, Percent_Identity=36.1038961038961, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI21355075, Length=344, Percent_Identity=36.3372093023256, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=32.4175824175824, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=32.4175824175824, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=34.9862258953168, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24662330, Length=362, Percent_Identity=35.6353591160221, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI18857967, Length=399, Percent_Identity=33.3333333333333, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI17977678, Length=371, Percent_Identity=35.3099730458221, Blast_Score=214, Evalue=9e-56, Organism=Drosophila melanogaster, GI24581954, Length=349, Percent_Identity=34.6704871060172, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24581952, Length=349, Percent_Identity=34.6704871060172, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24581956, Length=349, Percent_Identity=34.6704871060172, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI28575014, Length=362, Percent_Identity=33.4254143646409, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI17136814, Length=355, Percent_Identity=35.7746478873239, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI281365720, Length=297, Percent_Identity=35.016835016835, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI17647335, Length=353, Percent_Identity=30.8781869688385, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI18859659, Length=426, Percent_Identity=30.0469483568075, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI28571338, Length=426, Percent_Identity=30.0469483568075, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI28571808, Length=356, Percent_Identity=33.7078651685393, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI28571809, Length=356, Percent_Identity=33.7078651685393, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI24642822, Length=391, Percent_Identity=28.1329923273657, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI21355559, Length=403, Percent_Identity=31.0173697270471, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24666101, Length=335, Percent_Identity=34.3283582089552, Blast_Score=171, Evalue=8e-43, Organism=Drosophila melanogaster, GI24643725, Length=397, Percent_Identity=29.7229219143577, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24668515, Length=337, Percent_Identity=31.4540059347181, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI20130173, Length=312, Percent_Identity=31.0897435897436, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI24640164, Length=393, Percent_Identity=25.1908396946565, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI19920478, Length=344, Percent_Identity=25.8720930232558, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI17136666, Length=419, Percent_Identity=27.2076372315036, Blast_Score=119, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DBPA_BACSU (P42305)
Other databases:
- EMBL: D83026 - EMBL: AL009126 - PIR: E69613 - RefSeq: NP_391790.2 - PDB: 2G0C - PDB: 2HJV - PDB: 3MOJ - PDBsum: 2G0C - PDBsum: 2HJV - PDBsum: 3MOJ - ProteinModelPortal: P42305 - SMR: P42305 - EnsemblBacteria: EBBACT00000001637 - GeneID: 937492 - GenomeReviews: AL009126_GR - KEGG: bsu:BSU39110 - NMPDR: fig|224308.1.peg.3916 - GenoList: BSU39110 - GeneTree: EBGT00070000031896 - HOGENOM: HBG737336 - PhylomeDB: P42305 - ProtClustDB: CLSK883265 - BioCyc: BSUB:BSU39110-MONOMER - GO: GO:0005737 - InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 - SMART: SM00487 - SMART: SM00490
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C
EC number: =3.6.4.13
Molecular weight: Translated: 54049; Mature: 53918
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS00039 DEAD_ATP_HELICASE; PS51192 HELICASE_ATP_BIND_1; PS51194 HELICASE_CTER; PS51195 Q_MOTIF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPL CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCH CELANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQK HHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHH SHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTML CEEEEECCHHHHHHHHCCCCCHHHHHEEEEECHHHHHHCHHHHHHHHHHHHCCCCHHEEE FSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDVLMTENP EECCCHHHHHHHHHHHHCCCCEEEEEECCCEECCCCEEEEEEECCCHHHHHHHHHHCCCC DSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVA CCEEEEEECHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECHH ARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAFEKRFLADIEEYIG HCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHC FEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKSEELNKDIMKLYFNGGKKKKIRAVD CEEEEECCCCHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEH FVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLKVMKNTTVKGKQLKVNKANK HHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCEEEECCCCC >Mature Secondary Structure SHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPL CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCH CELANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQK HHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHH SHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTML CEEEEECCHHHHHHHHCCCCCHHHHHEEEEECHHHHHHCHHHHHHHHHHHHCCCCHHEEE FSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDVLMTENP EECCCHHHHHHHHHHHHCCCCEEEEEECCCEECCCCEEEEEEECCCHHHHHHHHHHCCCC DSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVA CCEEEEEECHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECHH ARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAFEKRFLADIEEYIG HCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHC FEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKSEELNKDIMKLYFNGGKKKKIRAVD CEEEEECCCCHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEH FVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLKVMKNTTVKGKQLKVNKANK HHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10481020