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The map label for this gene is slrA

Identifier: 255767811

GI number: 255767811

Start: 3923319

End: 3923477

Strand: Direct

Name: slrA

Synonym: BSU38229

Alternate gene names: 255767811

Gene position: 3923319-3923477 (Clockwise)

Preceding gene: 255767808

Following gene: 16080874

Centisome position: 93.07

GC content: 36.48

Gene sequence:

>159_bases
ATGAAAACTCATGTTAAAAAAGATTTGGACAAAGGTTGGCATATGTTAATTCAAGAAGCTAGATCCATTGGATTAGGCAT
TCATGATGTGAGGCAGTTTTTAGAATCTGAGACAGCATCAAGAAAGAAAAACCACAAAAAAACCGTCCGGCAAGACTAG

Upstream 100 bases:

>100_bases
CTATGTGTGAAATTTGTTGTACTCGCCTCCATCATCGCGCTGGCTTGTCTTTTATTGCCCGCATGTTGCAGGAAAACATT
TTATACAATTGGAGGTTACT

Downstream 100 bases:

>100_bases
TCCGAACAGGCGGATCTATTTACCTCTGGCTTTTCTATCACCTGATCTGAGTTTTCACCATATCCTCTATTCAAAAGCAA
ATCGCTGCGCTGAGCTTGAG

Product: anti-repressor of SlrR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MKTHVKKDLDKGWHMLIQEARSIGLGIHDVRQFLESETASRKKNHKKTVRQD

Sequences:

>Translated_52_residues
MKTHVKKDLDKGWHMLIQEARSIGLGIHDVRQFLESETASRKKNHKKTVRQD
>Mature_52_residues
MKTHVKKDLDKGWHMLIQEARSIGLGIHDVRQFLESETASRKKNHKKTVRQD

Specific function: Required specifically for induction of eps and yqxM operons by antagonizing sinR. Regulates slrR activity. Controls the initiation of biofilm formation

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Sin domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SLRA_BACSU (P0C8M5)

Other databases:

- EMBL:   AL009126
- RefSeq:   YP_003097794.1
- EnsemblBacteria:   EBBACT00000082739
- GeneID:   8303165
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38229
- GenoList:   BSU38229
- GeneTree:   EBGT00050000001805
- HOGENOM:   HBG338454
- ProtClustDB:   CLSK2539637
- GO:   GO:0005488
- GO:   GO:0006350
- InterPro:   IPR012288
- InterPro:   IPR010981
- Gene3D:   G3DSA:1.10.287.270

Pfam domain/function: PF08671 SinI

EC number: NA

Molecular weight: Translated: 6126; Mature: 6126

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS51500 SIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTHVKKDLDKGWHMLIQEARSIGLGIHDVRQFLESETASRKKNHKKTVRQD
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTHVKKDLDKGWHMLIQEARSIGLGIHDVRQFLESETASRKKNHKKTVRQD
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377