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The map label for this gene is ywcB

Identifier: 16080874

GI number: 16080874

Start: 3923920

End: 3924228

Strand: Direct

Name: ywcB

Synonym: BSU38230

Alternate gene names: 16080874

Gene position: 3923920-3924228 (Clockwise)

Preceding gene: 255767811

Following gene: 255767812

Centisome position: 93.08

GC content: 41.75

Gene sequence:

>309_bases
ATGTACAAAGCTGATTATAAACAGATTGCTGCAACGCCGTCTTTTCAAGCTTTTTTAAAGCAGAAACGCGCTTTTATTGT
TCCTTCTGCGATTTTCTTTTTTGTTTTTTATTTTTCACTCCCTGTTTTGACATCTTATTTCACCTTTTTGAATGCACCGG
CCATTGGAGCTGTTTCATGGGCTTGGCTGTTCGCCATCGCCCAATTCGCTATGACCTGGATACTGAGTACTGTGTATTCC
CGGAGAGCCGCCCATTTCGATAAGTATGTAAGCGCTTTAAAAGAGGATCTGAAGGGTGAACAGACATGA

Upstream 100 bases:

>100_bases
TTCATCCTCCAGCTATTGTACAACGCATAAATCGGACTTTCAGTACATACCTATTGGTGTACCTTTTTGCTTACGTTTAG
CGAATAAAAGGAGGAAAGCC

Downstream 100 bases:

>100_bases
ATATGACTGCTTTTTTATTATTTTTGGCGATTGTTGGCCTGACGCTTATTATCACGTATTTTGCCGCGAAGCGGACGAAA
ACGACGAGTGAGTTTTATAC

Product: phage protein (superinfection immunity)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MYKADYKQIAATPSFQAFLKQKRAFIVPSAIFFFVFYFSLPVLTSYFTFLNAPAIGAVSWAWLFAIAQFAMTWILSTVYS
RRAAHFDKYVSALKEDLKGEQT

Sequences:

>Translated_102_residues
MYKADYKQIAATPSFQAFLKQKRAFIVPSAIFFFVFYFSLPVLTSYFTFLNAPAIGAVSWAWLFAIAQFAMTWILSTVYS
RRAAHFDKYVSALKEDLKGEQT
>Mature_102_residues
MYKADYKQIAATPSFQAFLKQKRAFIVPSAIFFFVFYFSLPVLTSYFTFLNAPAIGAVSWAWLFAIAQFAMTWILSTVYS
RRAAHFDKYVSALKEDLKGEQT

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWCB_BACSU (P39600)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39687
- RefSeq:   NP_391702.1
- EnsemblBacteria:   EBBACT00000002027
- GeneID:   937304
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38230
- NMPDR:   fig|224308.1.peg.3828
- GenoList:   BSU38230
- GeneTree:   EBGT00050000004406
- HOGENOM:   HBG534519
- OMA:   SWAWLFA
- ProtClustDB:   CLSK888100
- BioCyc:   BSUB:BSU38230-MONOMER
- InterPro:   IPR007436

Pfam domain/function: PF04341 DUF485

EC number: NA

Molecular weight: Translated: 11715; Mature: 11715

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1308c39c)-; HASH(0x1333e1fc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKADYKQIAATPSFQAFLKQKRAFIVPSAIFFFVFYFSLPVLTSYFTFLNAPAIGAVSW
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AWLFAIAQFAMTWILSTVYSRRAAHFDKYVSALKEDLKGEQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MYKADYKQIAATPSFQAFLKQKRAFIVPSAIFFFVFYFSLPVLTSYFTFLNAPAIGAVSW
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AWLFAIAQFAMTWILSTVYSRRAAHFDKYVSALKEDLKGEQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377