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The map label for this gene is ywtF

Identifier: 255767776

GI number: 255767776

Start: 3694239

End: 3695207

Strand: Direct

Name: ywtF

Synonym: BSU35840

Alternate gene names: 255767776

Gene position: 3694239-3695207 (Clockwise)

Preceding gene: 16080635

Following gene: 16080638

Centisome position: 87.63

GC content: 41.18

Gene sequence:

>969_bases
ATGGAAGAACGATCACAGCGCAGAAAGAAAAAAAGAAAACTAAAAAAATGGGTGAAAGTTGTTGCCGGATTAATGGCTTT
TTTAGTCATTGCGGCAGGCTCTGTCGGCGCCTATGCTTTTGTAAAGCTGAACAATGCTTCTAAGGAAGCTCATGTCAGCC
TTGCACGCGGAGAACAATCTGTAAAACGGATCAAAGAATTTGATCCTGGAAAAGATTCTTTTTCTGTATTGCTCTTAGGA
ATTGATGCCAGGGAGAAAAACGGCGAGACCGTCGATCAGGCAAGAAGTGACGCGAATGTGCTGGTTACATTTAATCGGAA
AGAAAAAACAGCTAAAATGCTGAGCATTCCGCGTGACGCCTATGTAAACATCCCAGGCCACGGGTATGATAAATTCACAC
ATGCTCACGCTTACGGCGGCGTTGACTTAACTGTGAAAACAGTTGAAGAAATGCTGGATATTCCAGTCGATTATGTCGTA
GAAAGCAATTTCACGGCTTTTGAAGACGTCGTAAACGAGTTAAATGGCGTCAAAGTAACTGTAAAAAGCGATAAAGTCAT
TCAGCAAATCAAAAAAGATACAAAAGGTAAAGTCGTTCTTCAAAAAGGAACACATACGCTTGATGGGGAAGAAGCGCTCG
CTTACGTAAGAACACGTAAAGCGGACAGTGACCTTTTACGCGGGCAAAGACAAATGGAAGTGCTGAGCGCCATTATAGAT
AAATCAAAATCATTGAGCTCAATTCCGGCTTATGATGATATTGTGGATACGATGGGGCAAAATTTAAAAATGAACTTATC
TCTTAAAGATGCCATCGGCCTGTTCCCGTTCATCACTTCATTGAAATCAGTTGAGTCTATTCAGCTGACGGGTTATGATT
ATGAACCTGCCGGAGTCTATTATTTCAAATTGAATCAGCAAAAGCTGCAGGAAGTTAAAAAAGAGCTGCAAAACGATTTA
GGTGTATAA

Upstream 100 bases:

>100_bases
AAATATAGGAATATTTATCGAAAAATGTCTTTCGAGTAGTTGCCCCATGGCAAATAGAATGGTACGCTTCAAATATTAAA
GAAACGTGAGGTATTGATAT

Downstream 100 bases:

>100_bases
TGAACGGGATGGCGATTACGCCATCCCGTTTTACATATTTCCTTGTTGAAAATTATCAAAGTAACGTTTAGCCTTAATTT
ATATGGATTATGTTTCACAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MEERSQRRKKKRKLKKWVKVVAGLMAFLVIAAGSVGAYAFVKLNNASKEAHVSLARGEQSVKRIKEFDPGKDSFSVLLLG
IDAREKNGETVDQARSDANVLVTFNRKEKTAKMLSIPRDAYVNIPGHGYDKFTHAHAYGGVDLTVKTVEEMLDIPVDYVV
ESNFTAFEDVVNELNGVKVTVKSDKVIQQIKKDTKGKVVLQKGTHTLDGEEALAYVRTRKADSDLLRGQRQMEVLSAIID
KSKSLSSIPAYDDIVDTMGQNLKMNLSLKDAIGLFPFITSLKSVESIQLTGYDYEPAGVYYFKLNQQKLQEVKKELQNDL
GV

Sequences:

>Translated_322_residues
MEERSQRRKKKRKLKKWVKVVAGLMAFLVIAAGSVGAYAFVKLNNASKEAHVSLARGEQSVKRIKEFDPGKDSFSVLLLG
IDAREKNGETVDQARSDANVLVTFNRKEKTAKMLSIPRDAYVNIPGHGYDKFTHAHAYGGVDLTVKTVEEMLDIPVDYVV
ESNFTAFEDVVNELNGVKVTVKSDKVIQQIKKDTKGKVVLQKGTHTLDGEEALAYVRTRKADSDLLRGQRQMEVLSAIID
KSKSLSSIPAYDDIVDTMGQNLKMNLSLKDAIGLFPFITSLKSVESIQLTGYDYEPAGVYYFKLNQQKLQEVKKELQNDL
GV
>Mature_322_residues
MEERSQRRKKKRKLKKWVKVVAGLMAFLVIAAGSVGAYAFVKLNNASKEAHVSLARGEQSVKRIKEFDPGKDSFSVLLLG
IDAREKNGETVDQARSDANVLVTFNRKEKTAKMLSIPRDAYVNIPGHGYDKFTHAHAYGGVDLTVKTVEEMLDIPVDYVV
ESNFTAFEDVVNELNGVKVTVKSDKVIQQIKKDTKGKVVLQKGTHTLDGEEALAYVRTRKADSDLLRGQRQMEVLSAIID
KSKSLSSIPAYDDIVDTMGQNLKMNLSLKDAIGLFPFITSLKSVESIQLTGYDYEPAGVYYFKLNQQKLQEVKKELQNDL
GV

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWTF_BACSU (Q7WY78)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_391465.2
- PDB:   3MEJ
- PDBsum:   3MEJ
- ProteinModelPortal:   Q7WY78
- SMR:   Q7WY78
- EnsemblBacteria:   EBBACT00000003621
- GeneID:   936823
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35840
- NMPDR:   fig|224308.1.peg.3591
- GenoList:   BSU35840
- GeneTree:   EBGT00070000031934
- HOGENOM:   HBG304505
- ProtClustDB:   CLSK887984
- BioCyc:   BSUB:BSU35840-MONOMER
- GO:   GO:0006350
- InterPro:   IPR004474
- TIGRFAMs:   TIGR00350

Pfam domain/function: PF03816 LytR_cpsA_psr

EC number: NA

Molecular weight: Translated: 35922; Mature: 35922

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x125adf0c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEERSQRRKKKRKLKKWVKVVAGLMAFLVIAAGSVGAYAFVKLNNASKEAHVSLARGEQS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH
VKRIKEFDPGKDSFSVLLLGIDAREKNGETVDQARSDANVLVTFNRKEKTAKMLSIPRDA
HHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHCCCCCC
YVNIPGHGYDKFTHAHAYGGVDLTVKTVEEMLDIPVDYVVESNFTAFEDVVNELNGVKVT
EEECCCCCCCHHHHHHCCCCCEEEHHHHHHHHCCCHHEEECCCCHHHHHHHHHCCCEEEE
VKSDKVIQQIKKDTKGKVVLQKGTHTLDGEEALAYVRTRKADSDLLRGQRQMEVLSAIID
ECCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH
KSKSLSSIPAYDDIVDTMGQNLKMNLSLKDAIGLFPFITSLKSVESIQLTGYDYEPAGVY
CCCCCCCCCCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEE
YFKLNQQKLQEVKKELQNDLGV
EEEECHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MEERSQRRKKKRKLKKWVKVVAGLMAFLVIAAGSVGAYAFVKLNNASKEAHVSLARGEQS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH
VKRIKEFDPGKDSFSVLLLGIDAREKNGETVDQARSDANVLVTFNRKEKTAKMLSIPRDA
HHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHCCCCCC
YVNIPGHGYDKFTHAHAYGGVDLTVKTVEEMLDIPVDYVVESNFTAFEDVVNELNGVKVT
EEECCCCCCCHHHHHHCCCCCEEEHHHHHHHHCCCHHEEECCCCHHHHHHHHHCCCEEEE
VKSDKVIQQIKKDTKGKVVLQKGTHTLDGEEALAYVRTRKADSDLLRGQRQMEVLSAIID
ECCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH
KSKSLSSIPAYDDIVDTMGQNLKMNLSLKDAIGLFPFITSLKSVESIQLTGYDYEPAGVY
CCCCCCCCCCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEE
YFKLNQQKLQEVKKELQNDLGV
EEEECHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10568751