Click here to switch to the map view.

The map label for this gene is yuzN

Identifier: 255767747

GI number: 255767747

Start: 3355045

End: 3355323

Strand: Reverse

Name: yuzN

Synonym: BSU32669

Alternate gene names: 255767747

Gene position: 3355323-3355045 (Counterclockwise)

Preceding gene: 16080319

Following gene: 16080318

Centisome position: 79.59

GC content: 40.5

Gene sequence:

>279_bases
ATGAATGGGAACAAAGACGCTATATTCAAAGCACTCGGCGATTCGACTCGGCGGCTTATATTAGACGAATTATCTGAACG
CAACGAGCTGACGTTGTATGAACTTACGATACGTCTTATTACAAAGTACGACCTTTCTATTACGCGACAGGCGATAGCTA
AACACCTTTCTGTACTGGAGGATGCAGGACTCGTAACATCAAAACGAAAGGGAAAATATCGAGTACTTATATTCAACAAC
GAACCGCTTAAAAATTTGCTGAAAGGATGGATAGAATAA

Upstream 100 bases:

>100_bases
ATATTTCAGACCTGCGCCGGATAGGTTCAGTTTCTATATCACGCAACCATACAGTTGCTTATACTTGACATGCAACTAAT
GGGTTGCTTATACTCAATAT

Downstream 100 bases:

>100_bases
TTTTATAAAATCAGAACAGGGCCTCTGATAAATGTGTGGGTTGTTTTGCTTGTAGCCAGATTGTTAGCATAGTACCATGC
TTCATTCATATCGAAGGAGG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MNGNKDAIFKALGDSTRRLILDELSERNELTLYELTIRLITKYDLSITRQAIAKHLSVLEDAGLVTSKRKGKYRVLIFNN
EPLKNLLKGWIE

Sequences:

>Translated_92_residues
MNGNKDAIFKALGDSTRRLILDELSERNELTLYELTIRLITKYDLSITRQAIAKHLSVLEDAGLVTSKRKGKYRVLIFNN
EPLKNLLKGWIE
>Mature_92_residues
MNGNKDAIFKALGDSTRRLILDELSERNELTLYELTIRLITKYDLSITRQAIAKHLSVLEDAGLVTSKRKGKYRVLIFNN
EPLKNLLKGWIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUZN_BACSU (C0H3Q8)

Other databases:

- EMBL:   AL009126
- RefSeq:   YP_003097781.1
- ProteinModelPortal:   C0H3Q8
- SMR:   C0H3Q8
- EnsemblBacteria:   EBBACT00000082681
- GeneID:   8303129
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32669
- GenoList:   BSU32669
- ProtClustDB:   CLSK2542211
- BioCyc:   BSUB:BSU32669-MONOMER
- GO:   GO:0005622
- InterPro:   IPR001845
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00418

Pfam domain/function: PF01022 HTH_5

EC number: NA

Molecular weight: Translated: 10589; Mature: 10589

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00846 HTH_ARSR_1; PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGNKDAIFKALGDSTRRLILDELSERNELTLYELTIRLITKYDLSITRQAIAKHLSVLE
CCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
DAGLVTSKRKGKYRVLIFNNEPLKNLLKGWIE
HCCCCCCCCCCCEEEEEECCCCHHHHHHHHCC
>Mature Secondary Structure
MNGNKDAIFKALGDSTRRLILDELSERNELTLYELTIRLITKYDLSITRQAIAKHLSVLE
CCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
DAGLVTSKRKGKYRVLIFNNEPLKNLLKGWIE
HCCCCCCCCCCCEEEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377