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The map label for this gene is sufB

Identifier: 16080319

GI number: 16080319

Start: 3355593

End: 3356990

Strand: Reverse

Name: sufB

Synonym: BSU32670

Alternate gene names: 16080319

Gene position: 3356990-3355593 (Counterclockwise)

Preceding gene: 16080320

Following gene: 255767747

Centisome position: 79.63

GC content: 44.06

Gene sequence:

>1398_bases
ATGGCTAAAAAAATGCCTGATATTGGTGAATACAAGTATGGTTTTCACGACAAGGACGTTTCCATTTTCCGTTCAGAGCG
CGGATTGACAAAAGAAATCGTAGAAGAAATTTCTCGCATGAAAGAAGAGCCTCAATGGATGCTTGACTTCCGCTTGAAAT
CACTTGAGCATTTCTACAATATGCCGATGCCTCAATGGGGCGGAGATTTAAACTCACTGAACTTTGACGAAATTACGTAC
TACGTAAAACCGTCTGAGCGTTCAGAGCGTTCTTGGGATGAAGTTCCTGAAGAAATTAAACAAACATTCGACAAGCTCGG
TATTCCTGAAGCTGAACAAAAATACCTTGCGGGTGTTTCTGCTCAGTACGAATCTGAGGTTGTATACCACAACATGAAAG
AAGATCTTGAAGCACAAGGCATCGTCTTTAAAGACACTGACAGCGCGCTGAAAGAGAATGAAGATATTTTCCGTGAGCAC
TGGGCAAAAGTAATCCCGCCGACTGATAACAAGTTTGCGGCGCTTAACTCAGCTGTTTGGTCCGGCGGTTCTTTCATCTA
CGTGCCTAAAGGCGTGAAGGTTGAAACACCGCTACAAGCTTACTTCCGTATCAACTCTGAGAACATGGGTCAGTTCGAAC
GTACACTGATCATTGTTGACGAAGAAGCAAGCGTTCATTATGTTGAAGGCTGTACTGCGCCTGTTTACACAACAAACTCA
CTTCACAGTGCGGTCGTTGAGATCATCGTGAAAAAAGGCGGCTACTGCCGTTATACAACGATCCAAAACTGGGCGAACAA
CGTTTACAACCTTGTAACAAAGCGTACAGTCTGTGAAGAAAACGCAACAATGGAATGGATCGACGGCAACATCGGTTCTA
AGCTGACAATGAAATATCCGGCTTGTATCCTAAAAGGCGAAGGCGCGCGCGGTATGACGCTTTCTATCGCTCTTGCGGGT
AAAGGCCAGCATCAGGATGCAGGTGCGAAAATGATTCACCTTGCACCAAACACATCATCTACAATCGTATCAAAATCGAT
TTCAAAACAGGGCGGAAAAGTAACGTACCGCGGAATCGTCCACTTCGGACGCAAAGCGGAAGGCGCCCGCTCTAACATCG
AGTGTGATACGCTCATTATGGATAACAAATCAACTTCTGACACAATTCCTTACAATGAAATCTTAAATGATAACATTTCA
TTGGAGCACGAAGCGAAAGTGTCTAAAGTATCTGAAGAGCAGCTCTTCTACTTGATGAGCCGCGGTATTTCTGAAGAAGA
AGCAACTGAAATGATCGTAATGGGCTTTATCGAGCCATTCACAAAAGAGCTTCCGATGGAATACGCAGTTGAAATGAACC
GTTTGATTAAGTTCGAAATGGAAGGTTCTATCGGTTAA

Upstream 100 bases:

>100_bases
TCCCTGCCCGTATCAAATGTGCAACCCTGTCATGGAAAGCACTTGAAAAAGGAGTCGCGAAAGAAGAAGGCGGCAATTAA
AAGGATTGGAGTGAAAATGG

Downstream 100 bases:

>100_bases
TGATGAAAACTCCTTTGTTTATCAAGGGGTTTAGAGATAGTTATCAACTTTAAAATGGCCGGCGTGCCGAATTTGATTGT
AGAAGACGAACTTTTGAAGT

Product: FeS cluster formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MAKKMPDIGEYKYGFHDKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITY
YVKPSERSERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAQGIVFKDTDSALKENEDIFREH
WAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNS
LHSAVVEIIVKKGGYCRYTTIQNWANNVYNLVTKRTVCEENATMEWIDGNIGSKLTMKYPACILKGEGARGMTLSIALAG
KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNIS
LEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG

Sequences:

>Translated_465_residues
MAKKMPDIGEYKYGFHDKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITY
YVKPSERSERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAQGIVFKDTDSALKENEDIFREH
WAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNS
LHSAVVEIIVKKGGYCRYTTIQNWANNVYNLVTKRTVCEENATMEWIDGNIGSKLTMKYPACILKGEGARGMTLSIALAG
KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNIS
LEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
>Mature_464_residues
AKKMPDIGEYKYGFHDKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITYY
VKPSERSERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAQGIVFKDTDSALKENEDIFREHW
AKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNSL
HSAVVEIIVKKGGYCRYTTIQNWANNVYNLVTKRTVCEENATMEWIDGNIGSKLTMKYPACILKGEGARGMTLSIALAGK
GQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISL
EHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family

Homologues:

Organism=Escherichia coli, GI87081955, Length=477, Percent_Identity=40.6708595387841, Blast_Score=372, Evalue=1e-104,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=26.6233766233766, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SUFB_BACSU (O32162)

Other databases:

- EMBL:   AL009126
- PIR:   D70019
- RefSeq:   NP_391146.1
- ProteinModelPortal:   O32162
- EnsemblBacteria:   EBBACT00000000706
- GeneID:   936706
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32670
- NMPDR:   fig|224308.1.peg.3272
- GenoList:   BSU32670
- GeneTree:   EBGT00050000000587
- HOGENOM:   HBG711081
- OMA:   SQCDSML
- PhylomeDB:   O32162
- ProtClustDB:   CLSK2752508
- BioCyc:   BSUB:BSU32670-MONOMER
- InterPro:   IPR010231
- InterPro:   IPR000825
- TIGRFAMs:   TIGR01980

Pfam domain/function: PF01458 UPF0051

EC number: NA

Molecular weight: Translated: 52730; Mature: 52599

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKMPDIGEYKYGFHDKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYN
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
MPMPQWGGDLNSLNFDEITYYVKPSERSERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHNMKEDLEAQGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVW
CHHHHHHHHHHHHHHHHHCCEEEECCCHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHC
SGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNS
CCCCEEEECCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCEEECCH
LHSAVVEIIVKKGGYCRYTTIQNWANNVYNLVTKRTVCEENATMEWIDGNIGSKLTMKYP
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECC
ACILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIV
EEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHH
HFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMS
HCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure 
AKKMPDIGEYKYGFHDKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYN
CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
MPMPQWGGDLNSLNFDEITYYVKPSERSERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHNMKEDLEAQGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVW
CHHHHHHHHHHHHHHHHHCCEEEECCCHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHC
SGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNS
CCCCEEEECCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCEEECCH
LHSAVVEIIVKKGGYCRYTTIQNWANNVYNLVTKRTVCEENATMEWIDGNIGSKLTMKYP
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECC
ACILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIV
EEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHH
HFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMS
HCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377