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The map label for this gene is ytcQ

Identifier: 255767692

GI number: 255767692

Start: 3085800

End: 3087296

Strand: Reverse

Name: ytcQ

Synonym: BSU30160

Alternate gene names: 255767692

Gene position: 3087296-3085800 (Counterclockwise)

Preceding gene: 16080069

Following gene: 255767691

Centisome position: 73.23

GC content: 45.96

Gene sequence:

>1497_bases
ATGGGAAACAAATGGAGGGTGCTTTTGATTGTGCTTGTACTGGCACTCGGCGGAGTGCTGGCGGGCTGTAAAGGAACTGA
TCAGTCTTCGGCTGAAGGCAAAGCTGGCCCAGATTCAAAGGTAAAGCTGTCTTGGATGGCGATTTTGTATCACCAGCAGC
CGCCGAAAGACAGGGCGATTAAAGAAATTGAAAAGCTGACAAATACAGAACTCGACATCACCTGGGTTCCAGACGCGGTG
AAAGAAGACAGGCTGAATGCAGCGCTTGCAGCCGGCAATCTTCCGCAAATCGTGACCATCCAGGATATTAAAAATTCGTC
AGTCATGAATGCCTTTCGGTCAGGAATGTTTTGGGAAATCGGCGATTATATCAAGGATTATCCCAACTTAAACAAAATGA
ACAAACTCATTAATAAAAATGTGACAATTGACGGCAAGCTCTACGGGATATACAGAGAGCGCCCGCTTTCCAGACAGGGG
ATCGTCATTCGGAAGGACTGGCTGGACAATTTAAATTTGAAAACCCCGAAAACGTTGGATGAGCTTTATGAAGTGGCCAA
AGCATTTACGGAGGACGACCCGGACAAGGATGGGAAAGATGATACATTCGGGCTGGCAGACCGTAATGACTTGATTTACG
GCGCGTTTAAAACGATTGGCTCGTATGAAGGCATGCCGACAGATTGGAAGGAATCGGGCGGCAAATTCACGCCTGATTTC
ATGACACAGGAATACAAAGACACGATGAACTATATGAAAAAGCTGCGTGATAACGGGTATATGAATAAGGATTTTCCCGT
CACAAGCAAAACCCAGCAGCAAGAGCTGTTTTCTCAAGGAAAAGCCGGAATTTATATTGGCAATATGGTAGATGCGGTCA
ATCTGCGCGACCATGCCTCTGATAAATCGATGAAGCTCGAGATCATCAACCGCATAAAAGGCCCAGATGGGAAAGAGCGG
GTATGGGCATCAGGAGGCCATAACGGCGTGTTTGCTTTCCCGAAAACGAGTGTGAAAACGGAAGCTGAGCTTAAACGGAT
CTTGGCGTTTTTTGACCGAATTGCCGAAGAAGATGTCTATAGCCTGATGACTTATGGCATTGACGGCGTTCATTACAACA
AAGGTGAGGACAAAACGTTTACACGCAAAGAAAGCCAGGTAAAAGACTGGCAGACTGATATTCAGCCGCTGTCCGCTTTA
ATTGCCATTGATAAAGCCTACTTAAAAAACACTGGAGATCCGCTTCGGACGGCGTACGAGGAGCTGACCGAGGACAATGA
AAAGATTATCGTCTCAAACCCGGCTGAAAGCCTGTATTCCGCATCGGAGTCGGAACGGGGTGACGAACTGAAGAAAATCA
TTGATGACGCGACCTACAAATATATGATTGGAGACATCACAGAAAGCCAGTTCGATAAAGAAGTGGAAAAATGGGAGTCA
AGCGGAGGAAAACAAATTATTCAGGAATACGAAGAAGCGTTTAAACAAGCAAAATAA

Upstream 100 bases:

>100_bases
CCCTGTTCTGCTTGTCTATCCGTTTATACAAAAGCATTTTGCAAAAGGAGCTTTGCTGGGATCTGTCAAAGGATAAAGAA
ATATGAAACGGAGGGGTACG

Downstream 100 bases:

>100_bases
CATTGGAAAAACCCAAAACGCGCAAGCGGTTTTGGGTTTTTTACATGCTTCTTTTTTGCTGGCGGTAGTTTCCCGGTGTA
ATCCCTTCCAGCTTCTTAAA

Product: ABC transporter binding lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MGNKWRVLLIVLVLALGGVLAGCKGTDQSSAEGKAGPDSKVKLSWMAILYHQQPPKDRAIKEIEKLTNTELDITWVPDAV
KEDRLNAALAAGNLPQIVTIQDIKNSSVMNAFRSGMFWEIGDYIKDYPNLNKMNKLINKNVTIDGKLYGIYRERPLSRQG
IVIRKDWLDNLNLKTPKTLDELYEVAKAFTEDDPDKDGKDDTFGLADRNDLIYGAFKTIGSYEGMPTDWKESGGKFTPDF
MTQEYKDTMNYMKKLRDNGYMNKDFPVTSKTQQQELFSQGKAGIYIGNMVDAVNLRDHASDKSMKLEIINRIKGPDGKER
VWASGGHNGVFAFPKTSVKTEAELKRILAFFDRIAEEDVYSLMTYGIDGVHYNKGEDKTFTRKESQVKDWQTDIQPLSAL
IAIDKAYLKNTGDPLRTAYEELTEDNEKIIVSNPAESLYSASESERGDELKKIIDDATYKYMIGDITESQFDKEVEKWES
SGGKQIIQEYEEAFKQAK

Sequences:

>Translated_498_residues
MGNKWRVLLIVLVLALGGVLAGCKGTDQSSAEGKAGPDSKVKLSWMAILYHQQPPKDRAIKEIEKLTNTELDITWVPDAV
KEDRLNAALAAGNLPQIVTIQDIKNSSVMNAFRSGMFWEIGDYIKDYPNLNKMNKLINKNVTIDGKLYGIYRERPLSRQG
IVIRKDWLDNLNLKTPKTLDELYEVAKAFTEDDPDKDGKDDTFGLADRNDLIYGAFKTIGSYEGMPTDWKESGGKFTPDF
MTQEYKDTMNYMKKLRDNGYMNKDFPVTSKTQQQELFSQGKAGIYIGNMVDAVNLRDHASDKSMKLEIINRIKGPDGKER
VWASGGHNGVFAFPKTSVKTEAELKRILAFFDRIAEEDVYSLMTYGIDGVHYNKGEDKTFTRKESQVKDWQTDIQPLSAL
IAIDKAYLKNTGDPLRTAYEELTEDNEKIIVSNPAESLYSASESERGDELKKIIDDATYKYMIGDITESQFDKEVEKWES
SGGKQIIQEYEEAFKQAK
>Mature_497_residues
GNKWRVLLIVLVLALGGVLAGCKGTDQSSAEGKAGPDSKVKLSWMAILYHQQPPKDRAIKEIEKLTNTELDITWVPDAVK
EDRLNAALAAGNLPQIVTIQDIKNSSVMNAFRSGMFWEIGDYIKDYPNLNKMNKLINKNVTIDGKLYGIYRERPLSRQGI
VIRKDWLDNLNLKTPKTLDELYEVAKAFTEDDPDKDGKDDTFGLADRNDLIYGAFKTIGSYEGMPTDWKESGGKFTPDFM
TQEYKDTMNYMKKLRDNGYMNKDFPVTSKTQQQELFSQGKAGIYIGNMVDAVNLRDHASDKSMKLEIINRIKGPDGKERV
WASGGHNGVFAFPKTSVKTEAELKRILAFFDRIAEEDVYSLMTYGIDGVHYNKGEDKTFTRKESQVKDWQTDIQPLSALI
AIDKAYLKNTGDPLRTAYEELTEDNEKIIVSNPAESLYSASESERGDELKKIIDDATYKYMIGDITESQFDKEVEKWESS
GGKQIIQEYEEAFKQAK

Specific function: Probably part of a binding-protein-dependent transport system

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTCQ_BACSU (Q795R2)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   H69989
- RefSeq:   NP_390894.3
- ProteinModelPortal:   Q795R2
- EnsemblBacteria:   EBBACT00000002565
- GeneID:   938090
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30160
- GenoList:   BSU30160
- GeneTree:   EBGT00050000001721
- HOGENOM:   HBG322670
- ProtClustDB:   CLSK872717
- BioCyc:   BSUB:BSU30160-MONOMER
- InterPro:   IPR006059

Pfam domain/function: PF01547 SBP_bac_1

EC number: NA

Molecular weight: Translated: 56384; Mature: 56253

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS01037 SBP_BACTERIAL_1; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNKWRVLLIVLVLALGGVLAGCKGTDQSSAEGKAGPDSKVKLSWMAILYHQQPPKDRAI
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHH
KEIEKLTNTELDITWVPDAVKEDRLNAALAAGNLPQIVTIQDIKNSSVMNAFRSGMFWEI
HHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCHHH
GDYIKDYPNLNKMNKLINKNVTIDGKLYGIYRERPLSRQGIVIRKDWLDNLNLKTPKTLD
HHHHHCCCCHHHHHHHHHCCCEECCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHH
ELYEVAKAFTEDDPDKDGKDDTFGLADRNDLIYGAFKTIGSYEGMPTDWKESGGKFTPDF
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCHHHCCCCCCHHH
MTQEYKDTMNYMKKLRDNGYMNKDFPVTSKTQQQELFSQGKAGIYIGNMVDAVNLRDHAS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCHHHHCCCHHCCC
DKSMKLEIINRIKGPDGKERVWASGGHNGVFAFPKTSVKTEAELKRILAFFDRIAEEDVY
CCHHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
SLMTYGIDGVHYNKGEDKTFTRKESQVKDWQTDIQPLSALIAIDKAYLKNTGDPLRTAYE
HHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ELTEDNEKIIVSNPAESLYSASESERGDELKKIIDDATYKYMIGDITESQFDKEVEKWES
HHCCCCCEEEEECCHHHHHHCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
SGGKQIIQEYEEAFKQAK
CCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GNKWRVLLIVLVLALGGVLAGCKGTDQSSAEGKAGPDSKVKLSWMAILYHQQPPKDRAI
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHH
KEIEKLTNTELDITWVPDAVKEDRLNAALAAGNLPQIVTIQDIKNSSVMNAFRSGMFWEI
HHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCHHH
GDYIKDYPNLNKMNKLINKNVTIDGKLYGIYRERPLSRQGIVIRKDWLDNLNLKTPKTLD
HHHHHCCCCHHHHHHHHHCCCEECCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHH
ELYEVAKAFTEDDPDKDGKDDTFGLADRNDLIYGAFKTIGSYEGMPTDWKESGGKFTPDF
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCHHHCCCCCCHHH
MTQEYKDTMNYMKKLRDNGYMNKDFPVTSKTQQQELFSQGKAGIYIGNMVDAVNLRDHAS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCHHHHCCCHHCCC
DKSMKLEIINRIKGPDGKERVWASGGHNGVFAFPKTSVKTEAELKRILAFFDRIAEEDVY
CCHHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
SLMTYGIDGVHYNKGEDKTFTRKESQVKDWQTDIQPLSALIAIDKAYLKNTGDPLRTAYE
HHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ELTEDNEKIIVSNPAESLYSASESERGDELKKIIDDATYKYMIGDITESQFDKEVEKWES
HHCCCCCEEEEECCHHHHHHCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
SGGKQIIQEYEEAFKQAK
CCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377