Click here to switch to the map view.

The map label for this gene is ytrH

Identifier: 255767674

GI number: 255767674

Start: 2994756

End: 2995097

Strand: Direct

Name: ytrH

Synonym: BSU29239

Alternate gene names: 255767674

Gene position: 2994756-2995097 (Clockwise)

Preceding gene: 16079968

Following gene: 255767675

Centisome position: 71.04

GC content: 49.42

Gene sequence:

>342_bases
ATGGATCAGGAAGCAGGATTTATGGTGAATTTTATCAATAGCTACTTCATTGCGTTAGGGGTGCTGATCGGGGGCGCACT
CATCGGAGGGCTCGGAGCATACTTGGCAGGCGAACCCCCGCTTACAGCCATTACAAAGCTTGCCAACCGGTTAAAAATAT
GGGCGCTTGTCGCAGCTATCGGAGGCACCTTTGATGCGGTATACAGCTTTGAACGCGGCATACTCGAAGGCAATACGAGA
GATATCTTTAAACAGCTTCTTTTAATTATTTCGGCCATGGGGGGCGCGCAAAGCGGCTGGCTTATTATATCATGGCTGAC
CCAGGAGCATCTTTCTTCATGA

Upstream 100 bases:

>100_bases
ATTATAAGGCCGGTTTCCAAAAGAAACAAATGTTCTTTTTTGACTCATCATCATACTTGTCCTGAAAGCTCAATATGATA
TAAAAGGTGAGGTGATAAAG

Downstream 100 bases:

>100_bases
GGGTCCCCCAGCATTACAAAAAACCGGGATGGCAGCGTTTTTTCGCGGGAATGATGTGCGGAGCCGTAATCAGCTGGTTC
TTTTTCCTGTTTACTTACGG

Product: membrane protein involved in a sporulation process

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MDQEAGFMVNFINSYFIALGVLIGGALIGGLGAYLAGEPPLTAITKLANRLKIWALVAAIGGTFDAVYSFERGILEGNTR
DIFKQLLLIISAMGGAQSGWLIISWLTQEHLSS

Sequences:

>Translated_113_residues
MDQEAGFMVNFINSYFIALGVLIGGALIGGLGAYLAGEPPLTAITKLANRLKIWALVAAIGGTFDAVYSFERGILEGNTR
DIFKQLLLIISAMGGAQSGWLIISWLTQEHLSS
>Mature_113_residues
MDQEAGFMVNFINSYFIALGVLIGGALIGGLGAYLAGEPPLTAITKLANRLKIWALVAAIGGTFDAVYSFERGILEGNTR
DIFKQLLLIISAMGGAQSGWLIISWLTQEHLSS

Specific function: Involved in sporulation. May contribute to cortex formation or stability

COG id: NA

COG function: NA

Gene ontology:

Cell location: Forespore outer membrane; Multi-pass membrane protein (Potential). Note=Shortly after the initiation of the engulfment, is localized to the sporulation septum. During later stages of sporulation, remains associated with the forespore outer membrane

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTRH_BACSU (C0H3P8)

Other databases:

- EMBL:   AL009126
- RefSeq:   YP_003097771.1
- EnsemblBacteria:   EBBACT00000082656
- GeneID:   8303067
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29239
- GenoList:   BSU29239
- GeneTree:   EBGT00050000002195
- ProtClustDB:   CLSK873525
- BioCyc:   BSUB:BSU29239-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12060; Mature: 12060

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11a39548)-; HASH(0xee78160)-; HASH(0x1189f3e4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQEAGFMVNFINSYFIALGVLIGGALIGGLGAYLAGEPPLTAITKLANRLKIWALVAAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
GGTFDAVYSFERGILEGNTRDIFKQLLLIISAMGGAQSGWLIISWLTQEHLSS
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCCH
>Mature Secondary Structure
MDQEAGFMVNFINSYFIALGVLIGGALIGGLGAYLAGEPPLTAITKLANRLKIWALVAAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
GGTFDAVYSFERGILEGNTRDIFKQLLLIISAMGGAQSGWLIISWLTQEHLSS
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 12662922