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The map label for this gene is ytvI

Identifier: 16079968

GI number: 16079968

Start: 2983164

End: 2984279

Strand: Direct

Name: ytvI

Synonym: BSU29160

Alternate gene names: 16079968

Gene position: 2983164-2984279 (Clockwise)

Preceding gene: 16079957

Following gene: 255767674

Centisome position: 70.76

GC content: 44.62

Gene sequence:

>1116_bases
GTGAATCAATCTTATATCACTATTTTTTTCAGAACCCTCTTTGTCATATCAATGACCGCAGGGTCGATAGCTGCGGCCTA
TTATTCGTTTCCGTTAACTTATCCGTTCCTGATCGCCCTTATTCTATCTTCAGTGATTCATCCTGTTGTCGATTATTTGG
ACAAAGTGACAGGATTCCCCCGAACGATAAATGTTCTGGGCGTTCTTGCTTTTTTTCTGCTCGCAGCCTTCGGCGTGCTC
ACCATTCTGGTAGCCGAAATCGTAACGGGAACAGCCTATCTAGCAAAAACGCTGCCTCCGCATATCAGCACGTTTATTTC
ATATTGCGAAAAATTGTTTACCACTCATATTCAGCCGCTCTATAACGAGTTAACTCTTTTGTTTCAAGAATTGGAAACGA
ACCAGCAGGCTTCCATCGTCACTCATATCCAGACACTCGGTGATTCTGCCGCTAAAAATGCCGGGCTCCTGCTGTCCCAC
ATTCTAGAGATGATCCCGAGATTTTTCGCTCTTCTTCCCAATACGGCGGCGGTTCTGATTTTTTCTCTTCTGGCAACCTT
TTTTATGACAAAGGATTGGCATAAGCTGAAAGCCATGCTTGTTTTAATTCTGCCGGATCGTGTGACAGCTAACAGCAAAG
CAATCAGCAGCGAATTAAAAAAAGCAATGACTGGTTTTATCAAAGCACAAGCCGTCCTCGTTTTCATCACGATGGTGATT
GTATTTATCGGCCTTTCTCTCTTAAAGGTTGAACACGCCGCAACAATTGCTTTTTTAATCGGGCTTGTAGATCTTCTCCC
TTACTTAGGTGCCGGCTCCGTATTTGTGCCCTGGATTTTGTATTTATCGATTACGGGCCAGCTGCCCCAAGCAATCGGAA
TTGGTATCCTGTACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGAT
CCGCTGGCAACACTCATCGCCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACT
CGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATGGTCCTATATCACCGTTCAGCAAAAATAA

Upstream 100 bases:

>100_bases
ACACATGCCATCCCTCCTTTAAGATGAATGTATTCATATTCAGCCGCAGCGTGAATACATATAAAAAATAGGACATGCTG
ACGAGAGGAGGACCGTTTTT

Downstream 100 bases:

>100_bases
AACGGCAGCCGTTTTTTCATGGCTGCCGTTTTTTATTTGATGATGATCCGCTTATTCTTCGACATTCCTCTCAGCCATTT
GAACAGAATCGGCTTACACC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MNQSYITIFFRTLFVISMTAGSIAAAYYSFPLTYPFLIALILSSVIHPVVDYLDKVTGFPRTINVLGVLAFFLLAAFGVL
TILVAEIVTGTAYLAKTLPPHISTFISYCEKLFTTHIQPLYNELTLLFQELETNQQASIVTHIQTLGDSAAKNAGLLLSH
ILEMIPRFFALLPNTAAVLIFSLLATFFMTKDWHKLKAMLVLILPDRVTANSKAISSELKKAMTGFIKAQAVLVFITMVI
VFIGLSLLKVEHAATIAFLIGLVDLLPYLGAGSVFVPWILYLSITGQLPQAIGIGILYLVVLIQRQLTEPKILSKSIGID
PLATLIALFAGFKLFGFLGLIAGPAVLVIIQAFITTGALKEIWSYITVQQK

Sequences:

>Translated_371_residues
MNQSYITIFFRTLFVISMTAGSIAAAYYSFPLTYPFLIALILSSVIHPVVDYLDKVTGFPRTINVLGVLAFFLLAAFGVL
TILVAEIVTGTAYLAKTLPPHISTFISYCEKLFTTHIQPLYNELTLLFQELETNQQASIVTHIQTLGDSAAKNAGLLLSH
ILEMIPRFFALLPNTAAVLIFSLLATFFMTKDWHKLKAMLVLILPDRVTANSKAISSELKKAMTGFIKAQAVLVFITMVI
VFIGLSLLKVEHAATIAFLIGLVDLLPYLGAGSVFVPWILYLSITGQLPQAIGIGILYLVVLIQRQLTEPKILSKSIGID
PLATLIALFAGFKLFGFLGLIAGPAVLVIIQAFITTGALKEIWSYITVQQK
>Mature_371_residues
MNQSYITIFFRTLFVISMTAGSIAAAYYSFPLTYPFLIALILSSVIHPVVDYLDKVTGFPRTINVLGVLAFFLLAAFGVL
TILVAEIVTGTAYLAKTLPPHISTFISYCEKLFTTHIQPLYNELTLLFQELETNQQASIVTHIQTLGDSAAKNAGLLLSH
ILEMIPRFFALLPNTAAVLIFSLLATFFMTKDWHKLKAMLVLILPDRVTANSKAISSELKKAMTGFIKAQAVLVFITMVI
VFIGLSLLKVEHAATIAFLIGLVDLLPYLGAGSVFVPWILYLSITGQLPQAIGIGILYLVVLIQRQLTEPKILSKSIGID
PLATLIALFAGFKLFGFLGLIAGPAVLVIIQAFITTGALKEIWSYITVQQK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTVI_BACSU (O34991)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   C70002
- RefSeq:   NP_390794.1
- EnsemblBacteria:   EBBACT00000000747
- GeneID:   937380
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29160
- NMPDR:   fig|224308.1.peg.2919
- GenoList:   BSU29160
- GeneTree:   EBGT00070000031867
- HOGENOM:   HBG345611
- OMA:   SIVTHIQ
- ProtClustDB:   CLSK887708
- BioCyc:   BSUB:BSU29160-MONOMER
- InterPro:   IPR014227
- InterPro:   IPR002549
- PANTHER:   PTHR21716
- TIGRFAMs:   TIGR02872

Pfam domain/function: PF01594 UPF0118

EC number: NA

Molecular weight: Translated: 40602; Mature: 40602

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10b030c8)-; HASH(0x10a2130c)-; HASH(0x11b3ae7c)-; HASH(0x11a9652c)-; HASH(0x11d8f7a8)-; HASH(0x1136249c)-; HASH(0x105908a4)-; HASH(0x113b6150)-; HASH(0x10131b68)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSYITIFFRTLFVISMTAGSIAAAYYSFPLTYPFLIALILSSVIHPVVDYLDKVTGFP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RTINVLGVLAFFLLAAFGVLTILVAEIVTGTAYLAKTLPPHISTFISYCEKLFTTHIQPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
YNELTLLFQELETNQQASIVTHIQTLGDSAAKNAGLLLSHILEMIPRFFALLPNTAAVLI
HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FSLLATFFMTKDWHKLKAMLVLILPDRVTANSKAISSELKKAMTGFIKAQAVLVFITMVI
HHHHHHHHHCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFIGLSLLKVEHAATIAFLIGLVDLLPYLGAGSVFVPWILYLSITGQLPQAIGIGILYLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VLIQRQLTEPKILSKSIGIDPLATLIALFAGFKLFGFLGLIAGPAVLVIIQAFITTGALK
HHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIWSYITVQQK
HHHHHHHCCCH
>Mature Secondary Structure
MNQSYITIFFRTLFVISMTAGSIAAAYYSFPLTYPFLIALILSSVIHPVVDYLDKVTGFP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RTINVLGVLAFFLLAAFGVLTILVAEIVTGTAYLAKTLPPHISTFISYCEKLFTTHIQPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
YNELTLLFQELETNQQASIVTHIQTLGDSAAKNAGLLLSHILEMIPRFFALLPNTAAVLI
HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FSLLATFFMTKDWHKLKAMLVLILPDRVTANSKAISSELKKAMTGFIKAQAVLVFITMVI
HHHHHHHHHCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFIGLSLLKVEHAATIAFLIGLVDLLPYLGAGSVFVPWILYLSITGQLPQAIGIGILYLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VLIQRQLTEPKILSKSIGIDPLATLIALFAGFKLFGFLGLIAGPAVLVIIQAFITTGALK
HHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIWSYITVQQK
HHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377