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The map label for this gene is yscB

Identifier: 255767666

GI number: 255767666

Start: 2953795

End: 2954460

Strand: Direct

Name: yscB

Synonym: BSU28890

Alternate gene names: 255767666

Gene position: 2953795-2954460 (Clockwise)

Preceding gene: 16079935

Following gene: 255767667

Centisome position: 70.07

GC content: 46.25

Gene sequence:

>666_bases
ATGAACAAACTGATACAGCTTGCTTTATTTTTCACATTGATGTTAACCGGTTGCTCGAATAGCAGCACATCTTCCGAATC
AAAAGTCGAAACCACTGTTAAGACAACGGCAGCATTTCCTCAAAAGGAGCTGGAGAAAGAGCTAAAAAAACTAAAACCCG
TTTCATTGGACATGAAGTTCGAGAGTCCACTCGCTACCGAGTTAGGAAAGCGGAAGGCAAAAGAGGAAGCTGAAAAGCAA
AGACAAATCGCCGCTGAGAAAAAGCTTGAAAAAGAGCGGGAGGCGAAACGAAAGAAACAGCAGGAGGAAAAAGCGGAGAG
ACAGCGATTAGCAGAGCAGCAGGCTGCAGAGAGACAGCGATTAGCCGAAGCGGAAAGACAAGCTGAACTTGAAAGACAGC
GGCAGGCAGCAATCCAAAAAGAGCAGAAAGCGAACGCTGAGAAAAAGCGGCAATCGCAGGCACAACGGCAGCAGACTGAG
GCACCCTCATCTAATAGTCAAGATCCACCATCTTCCTCGAGTCAGACAGATAAAACCATTCAACAGCCAGCTTCAGAGCT
TCCTGATGACGATGGTTATGGTTATGAAGAACGAAAAAAGTGGCATGACGATCAAGTAGAATGGGGCATTAAACAAGGGT
ATATCGATCCCGAAGACGCACCATAA

Upstream 100 bases:

>100_bases
TCCCCCTTATTACGCAATTTACAACAAAACCACCGACAGGAAGAAATGTAAAACAAAGTTAATCTCTGACCGATATAAGG
AGCAGAAGGGAGCCTGACAC

Downstream 100 bases:

>100_bases
AATAAAAAAAGCCAAGGCATTCAGCCTTGGCTTATCCTCCGATCAGCTGCACGAACACAGGGATGACCAGAACCGTTACC
ACTCCTACTACGACAACAGC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNKLIQLALFFTLMLTGCSNSSTSSESKVETTVKTTAAFPQKELEKELKKLKPVSLDMKFESPLATELGKRKAKEEAEKQ
RQIAAEKKLEKEREAKRKKQQEEKAERQRLAEQQAAERQRLAEAERQAELERQRQAAIQKEQKANAEKKRQSQAQRQQTE
APSSNSQDPPSSSSQTDKTIQQPASELPDDDGYGYEERKKWHDDQVEWGIKQGYIDPEDAP

Sequences:

>Translated_221_residues
MNKLIQLALFFTLMLTGCSNSSTSSESKVETTVKTTAAFPQKELEKELKKLKPVSLDMKFESPLATELGKRKAKEEAEKQ
RQIAAEKKLEKEREAKRKKQQEEKAERQRLAEQQAAERQRLAEAERQAELERQRQAAIQKEQKANAEKKRQSQAQRQQTE
APSSNSQDPPSSSSQTDKTIQQPASELPDDDGYGYEERKKWHDDQVEWGIKQGYIDPEDAP
>Mature_221_residues
MNKLIQLALFFTLMLTGCSNSSTSSESKVETTVKTTAAFPQKELEKELKKLKPVSLDMKFESPLATELGKRKAKEEAEKQ
RQIAAEKKLEKEREAKRKKQQEEKAERQRLAEQQAAERQRLAEAERQAELERQRQAAIQKEQKANAEKKRQSQAQRQQTE
APSSNSQDPPSSSSQTDKTIQQPASELPDDDGYGYEERKKWHDDQVEWGIKQGYIDPEDAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YSCB_BACSU (P94517)

Other databases:

- EMBL:   Z75208
- EMBL:   AL009126
- PIR:   F69983
- RefSeq:   NP_390767.2
- EnsemblBacteria:   EBBACT00000003595
- GeneID:   936599
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU28890
- NMPDR:   fig|224308.1.peg.2892
- GenoList:   BSU28890
- GeneTree:   EBGT00070000032803
- ProtClustDB:   CLSK2540198
- BioCyc:   BSUB:BSU28890-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25317; Mature: 25317

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLIQLALFFTLMLTGCSNSSTSSESKVETTVKTTAAFPQKELEKELKKLKPVSLDMKF
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
ESPLATELGKRKAKEEAEKQRQIAAEKKLEKEREAKRKKQQEEKAERQRLAEQQAAERQR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEAERQAELERQRQAAIQKEQKANAEKKRQSQAQRQQTEAPSSNSQDPPSSSSQTDKTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
QQPASELPDDDGYGYEERKKWHDDQVEWGIKQGYIDPEDAP
HHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNKLIQLALFFTLMLTGCSNSSTSSESKVETTVKTTAAFPQKELEKELKKLKPVSLDMKF
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
ESPLATELGKRKAKEEAEKQRQIAAEKKLEKEREAKRKKQQEEKAERQRLAEQQAAERQR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEAERQAELERQRQAAIQKEQKANAEKKRQSQAQRQQTEAPSSNSQDPPSSSSQTDKTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
QQPASELPDDDGYGYEERKKWHDDQVEWGIKQGYIDPEDAP
HHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377