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The map label for this gene is araN

Identifier: 255767663

GI number: 255767663

Start: 2941674

End: 2942975

Strand: Reverse

Name: araN

Synonym: BSU28750

Alternate gene names: 255767663

Gene position: 2942975-2941674 (Counterclockwise)

Preceding gene: 16079928

Following gene: 16079926

Centisome position: 69.81

GC content: 44.24

Gene sequence:

>1302_bases
ATGAAAAAAATGACTGTCTGTTTTCTTGTGCTCATGATGTTGCTGACATTAGTCATTGCCGGGTGTTCAGCAGAAAAATC
ATCCGGCAAATCGGGTGAAACTGAGCTGACCTTTTGGACATTTAACGGGCTTCATGAGCAGTTCTATGTGGAAATGGTGA
AGGAATGGAACAAAAAATATCCTGACCGCAAAATTAAGCTGAATACGGTCGTTTATCCATATGGACAAATGCACGATAAC
TTATCTATCTCCCTAATAGCGGGAGAAGGCGTTCCTGATATTGCAGATGTCGAATTGGCCCGTTTTTCAAACTTTTTGAA
GGGCTCTGACATACCGCTTGCCGACTTGACTCCGCTGATTGAAAAGGATCGCGATAAATTCGTTGAGGCGCGGCTGACAT
TGTACAGCAAAAACGGAAAGCTTTACGGACTCGATACACATGTAGGGACAACGGTCATGTTTTATAACATGGATGTGATG
AAAAAAGCCGGCGTCAATCCTGACGATATTAAAACATGGGATGATTACCATAAAGCCGGACAGAAAGTGCGCAAAGTGAC
CGGGAAGCCGATGGGAACGGTGGAAACAAATGATTCCGCAACGTTCTTATCTATGATTTCACAGCAAAACTCAGGCTATT
TTGATAAAAACGGCAAGCTGATCCTCAATAATGACACCAACGTAAAAACACTTCAATATTTAAAAGACATGATCAATGAT
AAAACGATGATTCCTGCGCCGGGCGGCGGGCATCACAGTGAAGAATACTACGGCTTTATGAACCAAGGAGGAGCTGCTTC
AGTTCTCATGCCGATTTGGTATATGGGAAGATTTATCGATTATATGCCTGATCTGAAAGGGAAGATTGCCATCAGACCGC
TCCCGGCATGGAAAGAGGGGGGCGACCGCTCGGCAGGTTTGGGCGGTACGGCAACTGTTGTACCGAAGCAATCCAAGCAT
GTTGAGTTAGCAAAAGAGTTTTTGGCCTTTGCGAAGGGCTCTGAAGAAGGAAATAAAAAACTCTGGAGCGTACTCGGCTT
TGACCCGCTTCGCTGGGATGTTTGGAGCTCCAAGGAATTGAAAGAGAAAAACAAATACACGGATTACTTCCAAAACGGAA
CAGGCATTTTTTCTGTGCTGCTCGATATCAAGGATGAAATCAATCCAATTTATTTACATGAGGATTTTGCCAAGGCTTCA
GACCTTGTCAACAGAAGCGTATTGTTCGACGCGCTTAAATCTCAGCAAAAAACGCCTAAACAAGCCTTGGACAGAGCGGC
AGGTGAACTGAAACAGAAATAG

Upstream 100 bases:

>100_bases
AGACCGATGCACCGGATTAAGAATCATCAATGAAAACAAAACGCTGATCAACCATGGTCTATATGAATAGCCCGCACCTC
GAATGGAAGGGGTAACGCAG

Downstream 100 bases:

>100_bases
AATCCCATTCAAAAAGTGAAAGCGGGGAGGTTCTCATGAAACCTGTGAAAACGGGAACGGTTCATCCCGTTCCTTCAGCT
GCGAAACAATCAGGCTGGCG

Product: sugar-binding lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MKKMTVCFLVLMMLLTLVIAGCSAEKSSGKSGETELTFWTFNGLHEQFYVEMVKEWNKKYPDRKIKLNTVVYPYGQMHDN
LSISLIAGEGVPDIADVELARFSNFLKGSDIPLADLTPLIEKDRDKFVEARLTLYSKNGKLYGLDTHVGTTVMFYNMDVM
KKAGVNPDDIKTWDDYHKAGQKVRKVTGKPMGTVETNDSATFLSMISQQNSGYFDKNGKLILNNDTNVKTLQYLKDMIND
KTMIPAPGGGHHSEEYYGFMNQGGAASVLMPIWYMGRFIDYMPDLKGKIAIRPLPAWKEGGDRSAGLGGTATVVPKQSKH
VELAKEFLAFAKGSEEGNKKLWSVLGFDPLRWDVWSSKELKEKNKYTDYFQNGTGIFSVLLDIKDEINPIYLHEDFAKAS
DLVNRSVLFDALKSQQKTPKQALDRAAGELKQK

Sequences:

>Translated_433_residues
MKKMTVCFLVLMMLLTLVIAGCSAEKSSGKSGETELTFWTFNGLHEQFYVEMVKEWNKKYPDRKIKLNTVVYPYGQMHDN
LSISLIAGEGVPDIADVELARFSNFLKGSDIPLADLTPLIEKDRDKFVEARLTLYSKNGKLYGLDTHVGTTVMFYNMDVM
KKAGVNPDDIKTWDDYHKAGQKVRKVTGKPMGTVETNDSATFLSMISQQNSGYFDKNGKLILNNDTNVKTLQYLKDMIND
KTMIPAPGGGHHSEEYYGFMNQGGAASVLMPIWYMGRFIDYMPDLKGKIAIRPLPAWKEGGDRSAGLGGTATVVPKQSKH
VELAKEFLAFAKGSEEGNKKLWSVLGFDPLRWDVWSSKELKEKNKYTDYFQNGTGIFSVLLDIKDEINPIYLHEDFAKAS
DLVNRSVLFDALKSQQKTPKQALDRAAGELKQK
>Mature_433_residues
MKKMTVCFLVLMMLLTLVIAGCSAEKSSGKSGETELTFWTFNGLHEQFYVEMVKEWNKKYPDRKIKLNTVVYPYGQMHDN
LSISLIAGEGVPDIADVELARFSNFLKGSDIPLADLTPLIEKDRDKFVEARLTLYSKNGKLYGLDTHVGTTVMFYNMDVM
KKAGVNPDDIKTWDDYHKAGQKVRKVTGKPMGTVETNDSATFLSMISQQNSGYFDKNGKLILNNDTNVKTLQYLKDMIND
KTMIPAPGGGHHSEEYYGFMNQGGAASVLMPIWYMGRFIDYMPDLKGKIAIRPLPAWKEGGDRSAGLGGTATVVPKQSKH
VELAKEFLAFAKGSEEGNKKLWSVLGFDPLRWDVWSSKELKEKNKYTDYFQNGTGIFSVLLDIKDEINPIYLHEDFAKAS
DLVNRSVLFDALKSQQKTPKQALDRAAGELKQK

Specific function: Part of the binding-protein-dependent transport system for L-arabinose

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARAN_BACSU (P94528)

Other databases:

- EMBL:   X89810
- EMBL:   Z75208
- EMBL:   AL009126
- PIR:   A69588
- RefSeq:   NP_390753.2
- ProteinModelPortal:   P94528
- SMR:   P94528
- EnsemblBacteria:   EBBACT00000003388
- GeneID:   937433
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU28750
- NMPDR:   fig|224308.1.peg.2878
- GenoList:   BSU28750
- GeneTree:   EBGT00050000001717
- HOGENOM:   HBG338215
- ProtClustDB:   CLSK872867
- BioCyc:   BSUB:BSU28750-MONOMER
- InterPro:   IPR006059

Pfam domain/function: PF01547 SBP_bac_1

EC number: NA

Molecular weight: Translated: 48674; Mature: 48674

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS01037 SBP_BACTERIAL_1; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMTVCFLVLMMLLTLVIAGCSAEKSSGKSGETELTFWTFNGLHEQFYVEMVKEWNKKY
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHC
PDRKIKLNTVVYPYGQMHDNLSISLIAGEGVPDIADVELARFSNFLKGSDIPLADLTPLI
CCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
EKDRDKFVEARLTLYSKNGKLYGLDTHVGTTVMFYNMDVMKKAGVNPDDIKTWDDYHKAG
HHHHHHHHHHHEEEEECCCEEEEEECCCCCEEEEEEHHHHHHCCCCHHHCCCHHHHHHHH
QKVRKVTGKPMGTVETNDSATFLSMISQQNSGYFDKNGKLILNNDTNVKTLQYLKDMIND
HHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCC
KTMIPAPGGGHHSEEYYGFMNQGGAASVLMPIWYMGRFIDYMPDLKGKIAIRPLPAWKEG
CEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
GDRSAGLGGTATVVPKQSKHVELAKEFLAFAKGSEEGNKKLWSVLGFDPLRWDVWSSKEL
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCHHH
KEKNKYTDYFQNGTGIFSVLLDIKDEINPIYLHEDFAKASDLVNRSVLFDALKSQQKTPK
HHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHH
QALDRAAGELKQK
HHHHHHHHHHCCC
>Mature Secondary Structure
MKKMTVCFLVLMMLLTLVIAGCSAEKSSGKSGETELTFWTFNGLHEQFYVEMVKEWNKKY
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHC
PDRKIKLNTVVYPYGQMHDNLSISLIAGEGVPDIADVELARFSNFLKGSDIPLADLTPLI
CCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
EKDRDKFVEARLTLYSKNGKLYGLDTHVGTTVMFYNMDVMKKAGVNPDDIKTWDDYHKAG
HHHHHHHHHHHEEEEECCCEEEEEECCCCCEEEEEEHHHHHHCCCCHHHCCCHHHHHHHH
QKVRKVTGKPMGTVETNDSATFLSMISQQNSGYFDKNGKLILNNDTNVKTLQYLKDMIND
HHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCC
KTMIPAPGGGHHSEEYYGFMNQGGAASVLMPIWYMGRFIDYMPDLKGKIAIRPLPAWKEG
CEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
GDRSAGLGGTATVVPKQSKHVELAKEFLAFAKGSEEGNKKLWSVLGFDPLRWDVWSSKEL
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCHHH
KEKNKYTDYFQNGTGIFSVLLDIKDEINPIYLHEDFAKASDLVNRSVLFDALKSQQKTPK
HHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHH
QALDRAAGELKQK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9084180; 8969504; 9384377; 10417639