Click here to switch to the map view.

The map label for this gene is yrkR

Identifier: 255767610

GI number: 255767610

Start: 2702688

End: 2703104

Strand: Reverse

Name: yrkR

Synonym: BSU26410

Alternate gene names: 255767610

Gene position: 2703104-2702688 (Counterclockwise)

Preceding gene: 16079695

Following gene: 16079693

Centisome position: 64.12

GC content: 38.85

Gene sequence:

>417_bases
ATGAGATTTTCTAACAAATTCAAAAAGGTGCCTTACCTGTTACAAGCGCTTCTCAACGTCTGTCTGTTCTTTCTGGCGTT
AGCCTTAAGCGCACTTCTGATCAGCGAGACTTGGTACATTGTGCTATTCGTATACAAGTCACTGTTCAACAAAGTGGACA
GCTATTATGAGATGCTTGGAGAACTGCTTATATTCTTCATGTACTTTGAGTTCATTGCTTTGATTATCAAATACTTCAAA
TCAGACTTTCATTTTCCGCTTCGCTACTTCATTTATATTGGCATCACAGCTGTCATTCGTTTGATTATCATCGATCATGA
TCAGGCGATCTCAACGTTCTGGTGGGCGATGGCCATTCTTGCAATGATTTGTGGATTCTTTATTGCCAATAGACGAAATT
CTGTTGTTGAACATTAA

Upstream 100 bases:

>100_bases
ACAAAAGAATTCTAAGTACTACATTGTGCTACGATTTTGGAACACCAAGATGTAGGCTGAGAATAAAAACCACGAATATA
TTGAAATAGGAGACAACATG

Downstream 100 bases:

>100_bases
TAAATTAGTTCGCATTATGCCGAAACGCCGCCGAAATGTCCTAATTGTGAAAGGGAACTGGTACAGATTTTTATAACTCT
ATCTGTTTAATGTCAGCTCA

Product: phosphate-starvation-inducible protein PsiE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRFSNKFKKVPYLLQALLNVCLFFLALALSALLISETWYIVLFVYKSLFNKVDSYYEMLGELLIFFMYFEFIALIIKYFK
SDFHFPLRYFIYIGITAVIRLIIIDHDQAISTFWWAMAILAMICGFFIANRRNSVVEH

Sequences:

>Translated_138_residues
MRFSNKFKKVPYLLQALLNVCLFFLALALSALLISETWYIVLFVYKSLFNKVDSYYEMLGELLIFFMYFEFIALIIKYFK
SDFHFPLRYFIYIGITAVIRLIIIDHDQAISTFWWAMAILAMICGFFIANRRNSVVEH
>Mature_138_residues
MRFSNKFKKVPYLLQALLNVCLFFLALALSALLISETWYIVLFVYKSLFNKVDSYYEMLGELLIFFMYFEFIALIIKYFK
SDFHFPLRYFIYIGITAVIRLIIIDHDQAISTFWWAMAILAMICGFFIANRRNSVVEH

Specific function: Unknown

COG id: COG3223

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psiE family [H]

Homologues:

Organism=Escherichia coli, GI1790462, Length=80, Percent_Identity=51.25, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009315
- InterPro:   IPR020948 [H]

Pfam domain/function: PF06146 PsiE [H]

EC number: NA

Molecular weight: Translated: 16446; Mature: 16446

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSNKFKKVPYLLQALLNVCLFFLALALSALLISETWYIVLFVYKSLFNKVDSYYEMLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLIFFMYFEFIALIIKYFKSDFHFPLRYFIYIGITAVIRLIIIDHDQAISTFWWAMAIL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AMICGFFIANRRNSVVEH
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRFSNKFKKVPYLLQALLNVCLFFLALALSALLISETWYIVLFVYKSLFNKVDSYYEMLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLIFFMYFEFIALIIKYFKSDFHFPLRYFIYIGITAVIRLIIIDHDQAISTFWWAMAIL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AMICGFFIANRRNSVVEH
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA