Click here to switch to the map view.

The map label for this gene is yrkS

Identifier: 16079693

GI number: 16079693

Start: 2701979

End: 2702143

Strand: Reverse

Name: yrkS

Synonym: BSU26400

Alternate gene names: 16079693

Gene position: 2702143-2701979 (Counterclockwise)

Preceding gene: 255767610

Following gene: 16079690

Centisome position: 64.1

GC content: 41.21

Gene sequence:

>165_bases
ATGAAGGTAATAATCATCGAGGGACTGCAAACTGACAAATGCATGAACGATTGCTATCATTATTTAATAAAACTTTATAG
GCAGGAGATCCAGGGTGATAGCAATATATCGTGGAACAAGCGATCAAGGGATCGAGCATCGACAGCCAGATCGAGGCCTG
TATAA

Upstream 100 bases:

>100_bases
ACAAACCATCGGTTTTTTTATTTGTTTTCATACTCATTGAAAATCACCTCATTAGGACAAACAGGTATTACGCAGCATTA
CCCAAGGGGTGATGTATTTT

Downstream 100 bases:

>100_bases
AGAAAGCAGGGACTAAAGATGTACTGAAGTATACCGATCTAAGGATTTTCTCAGGAGAGCTTTTAGAACGTCCGGCTTTG
AATGCCTGCGGGAGGATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MKVIIIEGLQTDKCMNDCYHYLIKLYRQEIQGDSNISWNKRSRDRASTARSRPV

Sequences:

>Translated_54_residues
MKVIIIEGLQTDKCMNDCYHYLIKLYRQEIQGDSNISWNKRSRDRASTARSRPV
>Mature_54_residues
MKVIIIEGLQTDKCMNDCYHYLIKLYRQEIQGDSNISWNKRSRDRASTARSRPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRKS_BACSU (P54446)

Other databases:

- EMBL:   M19299
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   A69978
- RefSeq:   NP_390517.1
- EnsemblBacteria:   EBBACT00000001111
- GeneID:   937670
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26400
- NMPDR:   fig|224308.1.peg.2642
- GenoList:   BSU26400
- ProtClustDB:   CLSK2752454
- BioCyc:   BSUB:BSU26400-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6402; Mature: 6402

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIIIEGLQTDKCMNDCYHYLIKLYRQEIQGDSNISWNKRSRDRASTARSRPV
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MKVIIIEGLQTDKCMNDCYHYLIKLYRQEIQGDSNISWNKRSRDRASTARSRPV
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3125151; 8969508; 9384377