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The map label for this gene is yqxD

Identifier: 255767575

GI number: 255767575

Start: 2603373

End: 2603867

Strand: Reverse

Name: yqxD

Synonym: BSU25230

Alternate gene names: 255767575

Gene position: 2603867-2603373 (Counterclockwise)

Preceding gene: 16079578

Following gene: 255767574

Centisome position: 61.77

GC content: 38.99

Gene sequence:

>495_bases
ATGGAGGGATGGAGAATTACTCTTCTTAATGAACAAGAAAAGACGATTTTTGTCGATGCTGATGCTTGTCCGGTAAAAGA
TGAAATTTTACAAACAGCATCCGAGTATGAAGTTCAAGTTCTTTTTGTCGCTTCATTTGAACATTATCAGCTTTCCAGAA
GCAATGAAGAAAAATGGAAGTATGTTGATCCTCATAAAGAAGCTGCTGATTTATATATCGCAAATCACGTGAAACCGGGA
GATATTGTTGTGACGCAGGACATCGGATTAGCATCTCTGCTGTTGAACAGAAATGTCTCTGTTATGTCGGAAAGAGGTCG
TCTTTACAAGGAAGACACGATTGATTTTGCCCTAGAGGGCCGTCATTTTTCCGGCAAACAAAGAAGAAAAGGCGTATATG
CCAAAGGGCCTAAAAAATTGAATAAAGAAGATCGAGAACGATTTATTACACTGCTGCAAAAAATCCTGTCGAACGATGAA
GGGATTTTGCACTAA

Upstream 100 bases:

>100_bases
TAAGATGTCAAGAATTTCTCCCGGAAATTTTTCGACAAATTCATATACATCCACAATAATAAAGGATGTGCGATTTTGCT
TGCTTTTATGCAGGAGTTTA

Downstream 100 bases:

>100_bases
AGCATCGAATAATGTACGACGGAGTGTTATAAGATGGGAAATCGGATACCAGATGAAATTGTGGATCAGGTGCAAAAGTC
GGCAGATATCGTTGAAGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: p23

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MEGWRITLLNEQEKTIFVDADACPVKDEILQTASEYEVQVLFVASFEHYQLSRSNEEKWKYVDPHKEAADLYIANHVKPG
DIVVTQDIGLASLLLNRNVSVMSERGRLYKEDTIDFALEGRHFSGKQRRKGVYAKGPKKLNKEDRERFITLLQKILSNDE
GILH

Sequences:

>Translated_164_residues
MEGWRITLLNEQEKTIFVDADACPVKDEILQTASEYEVQVLFVASFEHYQLSRSNEEKWKYVDPHKEAADLYIANHVKPG
DIVVTQDIGLASLLLNRNVSVMSERGRLYKEDTIDFALEGRHFSGKQRRKGVYAKGPKKLNKEDRERFITLLQKILSNDE
GILH
>Mature_164_residues
MEGWRITLLNEQEKTIFVDADACPVKDEILQTASEYEVQVLFVASFEHYQLSRSNEEKWKYVDPHKEAADLYIANHVKPG
DIVVTQDIGLASLLLNRNVSVMSERGRLYKEDTIDFALEGRHFSGKQRRKGVYAKGPKKLNKEDRERFITLLQKILSNDE
GILH

Specific function: Unknown

COG id: COG1671

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0178 family

Homologues:

Organism=Escherichia coli, GI87081732, Length=141, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQXD_BACSU (P17868)

Other databases:

- EMBL:   X03897
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   A29279
- RefSeq:   NP_390401.2
- EnsemblBacteria:   EBBACT00000001028
- GeneID:   937896
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25230
- NMPDR:   fig|224308.1.peg.2526
- GenoList:   BSU25230
- GeneTree:   EBGT00050000002200
- HOGENOM:   HBG363074
- PhylomeDB:   P17868
- ProtClustDB:   CLSK887593
- BioCyc:   BSUB:BSU25230-MONOMER
- HAMAP:   MF_00489
- InterPro:   IPR003791

Pfam domain/function: PF02639 DUF188

EC number: NA

Molecular weight: Translated: 18936; Mature: 18936

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGWRITLLNEQEKTIFVDADACPVKDEILQTASEYEVQVLFVASFEHYQLSRSNEEKWK
CCCEEEEEECCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEEECCCCEECCCCCCCCCC
YVDPHKEAADLYIANHVKPGDIVVTQDIGLASLLLNRNVSVMSERGRLYKEDTIDFALEG
EECCCCCHHHEEEECCCCCCCEEEECCCCHHHHHHCCCHHHHHHCCCEECCCCEEEEECC
RHFSGKQRRKGVYAKGPKKLNKEDRERFITLLQKILSNDEGILH
CCCCCHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEGWRITLLNEQEKTIFVDADACPVKDEILQTASEYEVQVLFVASFEHYQLSRSNEEKWK
CCCEEEEEECCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEEECCCCEECCCCCCCCCC
YVDPHKEAADLYIANHVKPGDIVVTQDIGLASLLLNRNVSVMSERGRLYKEDTIDFALEG
EECCCCCHHHEEEECCCCCCCEEEECCCCHHHHHHCCCHHHHHHCCCEECCCCEEEEECC
RHFSGKQRRKGVYAKGPKKLNKEDRERFITLLQKILSNDEGILH
CCCCCHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3086839; 8969508; 9384377