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The map label for this gene is yqjC

Identifier: 255767522

GI number: 255767522

Start: 2488329

End: 2488751

Strand: Reverse

Name: yqjC

Synonym: BSU23930

Alternate gene names: 255767522

Gene position: 2488751-2488329 (Counterclockwise)

Preceding gene: 16079450

Following gene: 255767521

Centisome position: 59.04

GC content: 43.26

Gene sequence:

>423_bases
ATGAACAGGCTTGACCATATCGGGATAGCCGTTTTTTCGATAAAAGATGCAAGAAGCTTTTATGAAAATGTATTGGGGCT
TGCATTTCTTCATCAAGAAACGGTTGAAGAGCAAAAGGTGAATGTTGCTTTTTTTCAAGCTGGTAGCGTCAAACTTGAGC
TGATAGAGCCGTTGACAGCTGACAGCCCCGTCCATTTATTTTTGGAGAAGAAAGGGCAGGGACTGCATCATATTGCGTTT
TTGTGCAACTGCCTATCTGAACAGCTTCAAGCATTGTCTGATCAGCATGTTCAATTGATTGACAGGTTTCCAAGACAGGG
AGCGAACGGGAAAAAGATCGCGTTTATTTCCCCTCGGGAAACAAACGGTGTTCTTGTAGAGCTTTGTGAACCGAAAGGAG
ACCAACACAATGAGCATGAATGA

Upstream 100 bases:

>100_bases
TTTTGAGACATGATTTTCACTCCTTAAACAATCTGTCTATATTTTAGCGTGTTTTGAATGGGCGGACAAGCGATATCTAT
TAGCGAAAGCAGGGATGAAA

Downstream 100 bases:

>100_bases
GCACATGGATCATTTTTACACGAAACGCAAGCAGGCAGAAGAAGGCGGAGGACGGGAAAAGCTGGCTCAGCAGCGGCAAA
AGGGCAAGCTCACTGCTCGG

Product: lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNRLDHIGIAVFSIKDARSFYENVLGLAFLHQETVEEQKVNVAFFQAGSVKLELIEPLTADSPVHLFLEKKGQGLHHIAF
LCNCLSEQLQALSDQHVQLIDRFPRQGANGKKIAFISPRETNGVLVELCEPKGDQHNEHE

Sequences:

>Translated_140_residues
MNRLDHIGIAVFSIKDARSFYENVLGLAFLHQETVEEQKVNVAFFQAGSVKLELIEPLTADSPVHLFLEKKGQGLHHIAF
LCNCLSEQLQALSDQHVQLIDRFPRQGANGKKIAFISPRETNGVLVELCEPKGDQHNEHE
>Mature_140_residues
MNRLDHIGIAVFSIKDARSFYENVLGLAFLHQETVEEQKVNVAFFQAGSVKLELIEPLTADSPVHLFLEKKGQGLHHIAF
LCNCLSEQLQALSDQHVQLIDRFPRQGANGKKIAFISPRETNGVLVELCEPKGDQHNEHE

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family

Homologues:

Organism=Homo sapiens, GI188035928, Length=129, Percent_Identity=35.6589147286822, Blast_Score=89, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17506387, Length=129, Percent_Identity=31.0077519379845, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQJC_BACSU (P54540)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   C69963
- RefSeq:   NP_390273.2
- ProteinModelPortal:   P54540
- SMR:   P54540
- EnsemblBacteria:   EBBACT00000001836
- GeneID:   938689
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23930
- NMPDR:   fig|224308.1.peg.2397
- GenoList:   BSU23930
- GeneTree:   EBGT00050000001950
- HOGENOM:   HBG704761
- ProtClustDB:   CLSK887540
- BioCyc:   BSUB:BSU23930-MONOMER
- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515
- TIGRFAMs:   TIGR03081

Pfam domain/function: PF00903 Glyoxalase

EC number: NA

Molecular weight: Translated: 15742; Mature: 15742

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00934 GLYOXALASE_I_1; PS00935 GLYOXALASE_I_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLDHIGIAVFSIKDARSFYENVLGLAFLHQETVEEQKVNVAFFQAGSVKLELIEPLTA
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEEECCCCC
DSPVHLFLEKKGQGLHHIAFLCNCLSEQLQALSDQHVQLIDRFPRQGANGKKIAFISPRE
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
TNGVLVELCEPKGDQHNEHE
CCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MNRLDHIGIAVFSIKDARSFYENVLGLAFLHQETVEEQKVNVAFFQAGSVKLELIEPLTA
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEEECCCCC
DSPVHLFLEKKGQGLHHIAFLCNCLSEQLQALSDQHVQLIDRFPRQGANGKKIAFISPRE
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
TNGVLVELCEPKGDQHNEHE
CCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377