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The map label for this gene is xkdC

Identifier: 255767284

GI number: 255767284

Start: 1322750

End: 1323550

Strand: Direct

Name: xkdC

Synonym: BSU12530

Alternate gene names: 255767284

Gene position: 1322750-1323550 (Clockwise)

Preceding gene: 255767283

Following gene: 255767285

Centisome position: 31.38

GC content: 47.57

Gene sequence:

>801_bases
ATGACAAAACGAACAATCGAACAGATTTTGGACGAGCTGAGAAGAGGGAGACGTCCATTACTGGCGGACAAACCGGCCGA
ATCAGACGCAAGCAGGTATGATTGCCTGCGCTGCAAGGATCAGGGAGGTTATCTCGTCAGGCAGAATGGCCTGGAAGTCT
GGACGATGTGCAGCTGCATGGCAGAACGAAAAGTGAAGCGGCTGCTGGGTGCAAGTGAGATTACCCACGCTTTCAGACAG
CTCGGCTTCAAGGAATTCCGCACGGAGGGAAAGCCGCAGGCCATAAAAGACGCATTTGAGTGTACAAAAGAGTATGTTGC
CGATTATGAACAAATCAAGGATTGCCGAAAAAACAGCATTGCCCTTTTAGGACAGCCCGGATCAGGGAAAACACACCTTT
TGACCGCCGCAGCCAACGAATTAATGAGAACATGCTATGTGCCTGTCATTTATTTTCCGTTCGTGGAAGGCTTTACTGAT
CTGAAAAATGATTTTGCCCTATTAGAAGCGAAGCTGAACCGGATGAAGCAGGCGGATGTGCTGTTCATTGATGATCTGTT
TAAACCGGTTAACGGCAAACCCCGCGCTACAGATTGGCAATTAGAGCAAATGTATTCGGTACTCAACTATCGCTACTTAA
ATCATAAACCGATTTTGCTTTCGAGCGAGCTGACAATTGAAGGACTTGTACGGGTCGATGAAGCGCTCGGCACGAGAATC
TATGAGATGTGCAGTGACTATTTAGTGATTATCAAAGGAGCAGCCTACGAGCTTAACCATAGATTGGAGGGCGTCAGATA
A

Upstream 100 bases:

>100_bases
ATCAAGGCTTTTCGCTACTGCTCGAAATTCATTGAAGATCGATTTTTCGCGCAGCAAGCCAAAAAGAATGCCGCAATTCA
GCATGAGAGGATGAAAAAAC

Downstream 100 bases:

>100_bases
TGTGTAAGCTTTGTCAAACAAAGAAAGTCATTGTGGAACATACCGGTATTGGAGTTGTTTTTCATCCATGTCCGAACTGC
CGGTCCGGCACTGACTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTKRTIEQILDELRRGRRPLLADKPAESDASRYDCLRCKDQGGYLVRQNGLEVWTMCSCMAERKVKRLLGASEITHAFRQ
LGFKEFRTEGKPQAIKDAFECTKEYVADYEQIKDCRKNSIALLGQPGSGKTHLLTAAANELMRTCYVPVIYFPFVEGFTD
LKNDFALLEAKLNRMKQADVLFIDDLFKPVNGKPRATDWQLEQMYSVLNYRYLNHKPILLSSELTIEGLVRVDEALGTRI
YEMCSDYLVIIKGAAYELNHRLEGVR

Sequences:

>Translated_266_residues
MTKRTIEQILDELRRGRRPLLADKPAESDASRYDCLRCKDQGGYLVRQNGLEVWTMCSCMAERKVKRLLGASEITHAFRQ
LGFKEFRTEGKPQAIKDAFECTKEYVADYEQIKDCRKNSIALLGQPGSGKTHLLTAAANELMRTCYVPVIYFPFVEGFTD
LKNDFALLEAKLNRMKQADVLFIDDLFKPVNGKPRATDWQLEQMYSVLNYRYLNHKPILLSSELTIEGLVRVDEALGTRI
YEMCSDYLVIIKGAAYELNHRLEGVR
>Mature_265_residues
TKRTIEQILDELRRGRRPLLADKPAESDASRYDCLRCKDQGGYLVRQNGLEVWTMCSCMAERKVKRLLGASEITHAFRQL
GFKEFRTEGKPQAIKDAFECTKEYVADYEQIKDCRKNSIALLGQPGSGKTHLLTAAANELMRTCYVPVIYFPFVEGFTDL
KNDFALLEAKLNRMKQADVLFIDDLFKPVNGKPRATDWQLEQMYSVLNYRYLNHKPILLSSELTIEGLVRVDEALGTRIY
EMCSDYLVIIKGAAYELNHRLEGVR

Specific function: May function as a transcriptional antiterminator

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaM

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XKDC_BACSU (P39782)

Other databases:

- EMBL:   Z34287
- EMBL:   Z70177
- EMBL:   AL009126
- PIR:   I40411
- RefSeq:   NP_389135.2
- ProteinModelPortal:   P39782
- SMR:   P39782
- EnsemblBacteria:   EBBACT00000001809
- GeneID:   939841
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12530
- NMPDR:   fig|224308.1.peg.1254
- GenoList:   BSU12530
- GeneTree:   EBGT00070000032317
- HOGENOM:   HBG420355
- ProtClustDB:   PRK06921
- BioCyc:   BSUB:BSU12530-MONOMER
- InterPro:   IPR003593
- InterPro:   IPR002611
- SMART:   SM00382

Pfam domain/function: PF01695 IstB

EC number: NA

Molecular weight: Translated: 30563; Mature: 30432

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRTIEQILDELRRGRRPLLADKPAESDASRYDCLRCKDQGGYLVRQNGLEVWTMCSCM
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEECCCCHHHHHHHHH
AERKVKRLLGASEITHAFRQLGFKEFRTEGKPQAIKDAFECTKEYVADYEQIKDCRKNSI
HHHHHHHHHCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
ALLGQPGSGKTHLLTAAANELMRTCYVPVIYFPFVEGFTDLKNDFALLEAKLNRMKQADV
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LFIDDLFKPVNGKPRATDWQLEQMYSVLNYRYLNHKPILLSSELTIEGLVRVDEALGTRI
EEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH
YEMCSDYLVIIKGAAYELNHRLEGVR
HHHHHHHEEEECCCHHHHHHHCCCCC
>Mature Secondary Structure 
TKRTIEQILDELRRGRRPLLADKPAESDASRYDCLRCKDQGGYLVRQNGLEVWTMCSCM
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEECCCCHHHHHHHHH
AERKVKRLLGASEITHAFRQLGFKEFRTEGKPQAIKDAFECTKEYVADYEQIKDCRKNSI
HHHHHHHHHCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
ALLGQPGSGKTHLLTAAANELMRTCYVPVIYFPFVEGFTDLKNDFALLEAKLNRMKQADV
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LFIDDLFKPVNGKPRATDWQLEQMYSVLNYRYLNHKPILLSSELTIEGLVRVDEALGTRI
EEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH
YEMCSDYLVIIKGAAYELNHRLEGVR
HHHHHHHEEEECCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083174; 9384377