Click here to switch to the map view.

The map label for this gene is xkdB

Identifier: 255767283

GI number: 255767283

Start: 1322014

End: 1322850

Strand: Direct

Name: xkdB

Synonym: BSU12520

Alternate gene names: 255767283

Gene position: 1322014-1322850 (Clockwise)

Preceding gene: 255767282

Following gene: 255767284

Centisome position: 31.36

GC content: 46.12

Gene sequence:

>837_bases
ATGAAAAACGATAAAAGCTATCCTTTTCCGACGTATTCAGGGTTGTTGAATTCAGAACATTATGACAAAATTGGCCCGGC
GTTATGGCTGTTTCTCTGGTTTATCAGCTCAACAACAAAAGAAATCGAAAAAGACGGCGTAAGCTGGGGCATCGTACTCG
GCCATAAGCCGTTAAAAGCGAGAGAAATGGCGGCAGTCTTCGGCGTAAGTGAAAAAACCGTCAGAAGATGGCTGGAGCTT
CTCGAAAACCATGATTACATAAAGGCCGTCCGTGCGCCATACGGACTGATGATTTCGGTCAAGCATTCAAAAAAATTCAG
CTTCAGATCGGACAATACTGTACACGGGAGTCTAAAAGAACGGCCATTTTCGCCGCAGACACCGGACACAAACGACCGTA
CAGATATAGATAAAACAAACAAATATACTGCTGCTGATGATGCAGTGGATCACATTGCGAAGCGGTTTACACAATTACGG
TCGGCTCAAGAAGGACGCACCGTGTATCCTTCCTCAAGAGATTATCAAGCCATCGCCCGCATTGTTGCCATCGGCGTTCC
TGTCACGCAAACAATCAAATGGCTTGAAGAATGCTTTCAGGCTTTTGAAAACCGGCGGACCGCCGCTTCTGAAACAATCA
AGGCTTTTCGCTACTGCTCGAAATTCATTGAAGATCGATTTTTCGCGCAGCAAGCCAAAAAGAATGCCGCAATTCAGCAT
GAGAGGATGAAAAAACATGACAAAACGAACAATCGAACAGATTTTGGACGAGCTGAGAAGAGGGAGACGTCCATTACTGG
CGGACAAACCGGCCGAATCAGACGCAAGCAGGTATGA

Upstream 100 bases:

>100_bases
GGCACCATTTCGTTTACCGCATGCGGCCTTCCGGTGTTTCACTTTGAAACGCAGGAACAGTTTCAAGCATACATGATGTT
AAAAGGAGAAGCGGCGTACA

Downstream 100 bases:

>100_bases
TTGCCTGCGCTGCAAGGATCAGGGAGGTTATCTCGTCAGGCAGAATGGCCTGGAAGTCTGGACGATGTGCAGCTGCATGG
CAGAACGAAAAGTGAAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKNDKSYPFPTYSGLLNSEHYDKIGPALWLFLWFISSTTKEIEKDGVSWGIVLGHKPLKAREMAAVFGVSEKTVRRWLEL
LENHDYIKAVRAPYGLMISVKHSKKFSFRSDNTVHGSLKERPFSPQTPDTNDRTDIDKTNKYTAADDAVDHIAKRFTQLR
SAQEGRTVYPSSRDYQAIARIVAIGVPVTQTIKWLEECFQAFENRRTAASETIKAFRYCSKFIEDRFFAQQAKKNAAIQH
ERMKKHDKTNNRTDFGRAEKRETSITGGQTGRIRRKQV

Sequences:

>Translated_278_residues
MKNDKSYPFPTYSGLLNSEHYDKIGPALWLFLWFISSTTKEIEKDGVSWGIVLGHKPLKAREMAAVFGVSEKTVRRWLEL
LENHDYIKAVRAPYGLMISVKHSKKFSFRSDNTVHGSLKERPFSPQTPDTNDRTDIDKTNKYTAADDAVDHIAKRFTQLR
SAQEGRTVYPSSRDYQAIARIVAIGVPVTQTIKWLEECFQAFENRRTAASETIKAFRYCSKFIEDRFFAQQAKKNAAIQH
ERMKKHDKTNNRTDFGRAEKRETSITGGQTGRIRRKQV
>Mature_278_residues
MKNDKSYPFPTYSGLLNSEHYDKIGPALWLFLWFISSTTKEIEKDGVSWGIVLGHKPLKAREMAAVFGVSEKTVRRWLEL
LENHDYIKAVRAPYGLMISVKHSKKFSFRSDNTVHGSLKERPFSPQTPDTNDRTDIDKTNKYTAADDAVDHIAKRFTQLR
SAQEGRTVYPSSRDYQAIARIVAIGVPVTQTIKWLEECFQAFENRRTAASETIKAFRYCSKFIEDRFFAQQAKKNAAIQH
ERMKKHDKTNNRTDFGRAEKRETSITGGQTGRIRRKQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaL

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XKDB_BACSU (P39781)

Other databases:

- EMBL:   Z34287
- EMBL:   Z70177
- EMBL:   AL009126
- PIR:   I40410
- RefSeq:   NP_389134.2
- EnsemblBacteria:   EBBACT00000000615
- GeneID:   939420
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12520
- NMPDR:   fig|224308.1.peg.1253
- GenoList:   BSU12520
- GeneTree:   EBGT00050000002370
- HOGENOM:   HBG337929
- ProtClustDB:   CLSK887118
- BioCyc:   BSUB:BSU12520-MONOMER
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32044; Mature: 32044

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNDKSYPFPTYSGLLNSEHYDKIGPALWLFLWFISSTTKEIEKDGVSWGIVLGHKPLKA
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
REMAAVFGVSEKTVRRWLELLENHDYIKAVRAPYGLMISVKHSKKFSFRSDNTVHGSLKE
HHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCHHC
RPFSPQTPDTNDRTDIDKTNKYTAADDAVDHIAKRFTQLRSAQEGRTVYPSSRDYQAIAR
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHH
IVAIGVPVTQTIKWLEECFQAFENRRTAASETIKAFRYCSKFIEDRFFAQQAKKNAAIQH
HHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERMKKHDKTNNRTDFGRAEKRETSITGGQTGRIRRKQV
HHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNDKSYPFPTYSGLLNSEHYDKIGPALWLFLWFISSTTKEIEKDGVSWGIVLGHKPLKA
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
REMAAVFGVSEKTVRRWLELLENHDYIKAVRAPYGLMISVKHSKKFSFRSDNTVHGSLKE
HHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCHHC
RPFSPQTPDTNDRTDIDKTNKYTAADDAVDHIAKRFTQLRSAQEGRTVYPSSRDYQAIAR
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHH
IVAIGVPVTQTIKWLEECFQAFENRRTAASETIKAFRYCSKFIEDRFFAQQAKKNAAIQH
HHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERMKKHDKTNNRTDFGRAEKRETSITGGQTGRIRRKQV
HHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083174; 9384377