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The map label for this gene is yhaJ

Identifier: 255767232

GI number: 255767232

Start: 1072042

End: 1072560

Strand: Reverse

Name: yhaJ

Synonym: BSU09965

Alternate gene names: 255767232

Gene position: 1072560-1072042 (Counterclockwise)

Preceding gene: 16078063

Following gene: 16078059

Centisome position: 25.44

GC content: 40.66

Gene sequence:

>519_bases
ATGAATTGCTGGAAGACCATAAATCTCATGAAGGATTATGGCGCCGTTCGCATAATATTAACTGCTGTATGTTTTATGAT
TTTGGTTTTTATATCTACCTTTTTAGCTTTTGAGCTGCTGCGGCCTGGCACAAGCTTAAGCGATGAATATGTATCTTTAT
TCGGCGGTTTGCTCGTCGTTATTTTATTTGTACATAAAGTCATCCATGTCCTGCCAATCATCTGCAAAAAAAGAAAAATA
GAAAAAAAGTTTTACATATTGCGCATGCGCACATGGAAACGTATACCAAAAACAACAATGCTGATTTCACTCGTCAGCCC
GTTCTTGCTGATTACACCGGTATTGTTTTACGCAGCACTGGCATTTCCGAATCACGCTCATTATTTTTGCATGATCTCGG
GCATTCACGCCGGCTACTGTCTGCCTGATTTCCTGCTGGCTCTCAAGCTGATAAAAGCACCGAAAACCGCTTTTATTGAT
CAGGAAGCTGACGGCTTGGATATTCTTGTTGAAAAGTAG

Upstream 100 bases:

>100_bases
TGCCGGATGATATTTTTTCTTAAAAAAGCATTGATTTTTTCTCTTGGGAGGAGTAAATTATTTTGAGATTCTATTCAAGA
TGTATGGAAGGATGACTTTG

Downstream 100 bases:

>100_bases
TCAAACCCTGGTGCTGGTGGCGATTTTTCAATTTGCATTCTATCTTTTTTAATAAATATTTGGTAATGTAATATGGGACA
GTTCAGAGAGAGGGGGAATC

Product: bacteriocin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MNCWKTINLMKDYGAVRIILTAVCFMILVFISTFLAFELLRPGTSLSDEYVSLFGGLLVVILFVHKVIHVLPIICKKRKI
EKKFYILRMRTWKRIPKTTMLISLVSPFLLITPVLFYAALAFPNHAHYFCMISGIHAGYCLPDFLLALKLIKAPKTAFID
QEADGLDILVEK

Sequences:

>Translated_172_residues
MNCWKTINLMKDYGAVRIILTAVCFMILVFISTFLAFELLRPGTSLSDEYVSLFGGLLVVILFVHKVIHVLPIICKKRKI
EKKFYILRMRTWKRIPKTTMLISLVSPFLLITPVLFYAALAFPNHAHYFCMISGIHAGYCLPDFLLALKLIKAPKTAFID
QEADGLDILVEK
>Mature_172_residues
MNCWKTINLMKDYGAVRIILTAVCFMILVFISTFLAFELLRPGTSLSDEYVSLFGGLLVVILFVHKVIHVLPIICKKRKI
EKKFYILRMRTWKRIPKTTMLISLVSPFLLITPVLFYAALAFPNHAHYFCMISGIHAGYCLPDFLLALKLIKAPKTAFID
QEADGLDILVEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHAJ_BACSU (O07518)

Other databases:

- EMBL:   Y14077
- EMBL:   Y14077
- EMBL:   AL009126
- PIR:   D69818
- PIR:   E69818
- RefSeq:   NP_388878.2
- EnsemblBacteria:   EBBACT00000002471
- GeneID:   936292
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09965
- NMPDR:   fig|224308.1.peg.997
- GenoList:   BSU09965
- GeneTree:   EBGT00050000002237
- ProtClustDB:   CLSK928981
- BioCyc:   BSUB:BSU09965-MONOMER
- InterPro:   IPR021683

Pfam domain/function: PF11667 DUF3267

EC number: NA

Molecular weight: Translated: 19640; Mature: 19640

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcd10dcc)-; HASH(0xd4129a8)-; HASH(0xe11d7ac)-; HASH(0xdb31738)-;

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCWKTINLMKDYGAVRIILTAVCFMILVFISTFLAFELLRPGTSLSDEYVSLFGGLLVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ILFVHKVIHVLPIICKKRKIEKKFYILRMRTWKRIPKTTMLISLVSPFLLITPVLFYAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AFPNHAHYFCMISGIHAGYCLPDFLLALKLIKAPKTAFIDQEADGLDILVEK
HCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEECH
>Mature Secondary Structure
MNCWKTINLMKDYGAVRIILTAVCFMILVFISTFLAFELLRPGTSLSDEYVSLFGGLLVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ILFVHKVIHVLPIICKKRKIEKKFYILRMRTWKRIPKTTMLISLVSPFLLITPVLFYAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AFPNHAHYFCMISGIHAGYCLPDFLLALKLIKAPKTAFIDQEADGLDILVEK
HCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377