| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
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The map label for this gene is dnaE
Identifier: 24373212
GI number:
Start: 1726307
End: 1729783
Strand: Direct
Name: dnaE
Synonym: SO_1644
Alternate gene names: NA
Gene position: NA
Preceding gene: 24373211
Following gene: 24373213
Centisome position: NA
GC content: NA
Gene sequence:
>3477_bases ATGTCCGATCCTCGTTTTGTGCATCTGCGTGTCCACAGTGACTTTTCCATGTCTGATGGTGTGGCTAAGGTCAAGCCGAT CCTCGCTCAAGTTGAAGCGAAAGGAATGGCGGCGGTGGCTTTGACGGATCAAAACAACCTCTGTGGTTTAGTCAAGTTTT ACGGCGGTTGCCACGGTGCGGGGATCAAGCCGATTATTGGCGCGGACTTTTGGATGCAAGTGCCAGGCTTTGAGGATGAA TTTTGTGCTGTCACCATTATCGCAATGGATAATGAAGGCTATCAAAATCTCACTCAAATCATCAGCCAAGCCTATTTACG TGGTCAAGTTCAAGGGCGTGTAGTGATTGACCAAGAGTGGTTGATCACTTACAACCCTGGCATTTTGCTACTGTCTGGCG GCAAAGAAGGGGACATAGGTAAAGCGCTGCTAAAAGGCAACAATACCCAAGTCGAGTCGTTATGCGAGTTTTATCAGCAG CATTTTGAGGGGCGTTATTTCCTCGAATTATTGCGTACAGGGCGCCCCGATGAGGAACGTTACCTGCATATGGCGGTGGG AGTAGCGCAGGAAAAGGGCATTCCGGTGGTAGCCACCAATCAGGTGGTGTTTTTAAAGCCTGAGGACTTTGAGGCACATG AAATCCGGGTCGCGATTCATGATGGTTTTACGCTTGCCGATCCGCGCCGTCCTAAAAAGTACAGTGAGCAGCAGTACCTT CGCAGTGAAGATGAAATGTGCGAACTGTTTGCCGATATTCCCGCAGCCCTTGCCAATACGGTTGAAATTGCTAAACGCTG TAACGTCACCATCCGTTTAAACGAATACTTTTTACCCAATTTTCCTACCGGCGACATGTCAATTGAAGATTTTCTGGTTG ATTGCTCGAAAAAAGGGCTTGAAGAACGTTTAGCATTTTTATTCCCCGATCCACAAGTGCGCGCCGAGCGCCGCGGTGAG TACGATGAGCGTCTCGATGTGGAGCTCAAGGTGATTAACCAGATGGGCTTTCCTGGTTACTTCTTGATCGTGATGGAGTT TATCCAGTGGGGCAAGGATAATGGTATTCCTGTCGGCCCGGGCCGTGGTTCGGGCGCCGGATCACTTGTGGCCTACGCTC TTAAGATTACCGACTTAGACCCACTCGAATTCGACCTGCTGTTCGAACGTTTCTTGAACCCAGAGCGGGTGTCGATGCCC GACTTCGACGTCGACTTCTGTATGGATAGACGCGACGAGGTGATTGATCACGTGGCCGAACTCTACGGCCGTGAAGCGGT ATCGCAAATTATCACCTTCGGTACTATGGCGGCAAAAGCGGTTATCCGTGACGTGGGCCGGGTGCTCGGTCATCCCTACG GCTTTGTGGATCGTATTTCAAAGCTTATCCCACCAGAGCCTGGGATGACACTGGCCAAAGCTTTTGAAGTGGAGCCAGCA CTGCAGGAATCTTACGATGCCGATGAGGATGTCAAAGATCTTATCGACATGTGTCGTAAACTTGAGGGCGTCACCCGAAA CGCGGGTAAACACGCGGGGGGCGTGGTCATCGCGCCCACCAAGATCACCGACTTTTCGCCGCTATACTGCGACGCCGAAG GTAAAAACCCCGTCACTCAGTTTGATAAAAACGATGTTGAAACCGCAGGGTTAGTGAAGTTCGACTTCCTTGGGCTTAGA ACGCTCACCATCGTCGATTGGGCGCTGGAAATGATCAACAAGGTGGAGGTCAAAAATGGCCGTTCACCAATACGCATTGA AGCCATTCCGCTAGACGATCCTGCTTCGTTCCGATTACTGCAACGTTATGAAACCACCGCGGTATTCCAGCTCGAATCCC GCGGTATGAAGGACTTGATTAAACGCCTGCAGCCCGACTGCTTCGAAGATATGATCGCTCTGGTGGCACTTTTCCGCCCA GGGCCTCTGCAATCGGGCATGGTGGATAACTTTATCGAGCGTAAGCATGGCCGTGAAGAGGTGTCTTACCCCGATTCCCA ATACCAGCATGAATCCTTAAAGGAACTACTCTCGCCCACCTACGGCATTATTTTGTACCAAGAGCAGGTGATGCAGATTG CACAGGTATTGTCGGGTTATACCTTAGGCGGCGCCGACATGCTGCGCCGTGCTATGGGTAAGAAAAAACCTGAGGAGATG GCCAAGCAGCGGAGTATTTTTAAAGAGGGCGCGATTAAAAACGGTGTCGATGGTGAGCTGTCGATGAAAATCTTCGACCT CGTGGAAAAGTTCGCCGGTTACGGTTTTAACAAATCTCACTCCGCGGCTTATGCGTTAGTTTCCTATCAAACCCTGTGGC TGAAGACCCATTTTCCACCGCAATTTATGGCAGCGGTGATGTCTGCCGATATGGATAACACCGATAAAATTGTGACCTTA GTGGATGAGTGTGAGCGGATGGGGCTCACCATCATTCCGCCGGATGTGAATAAGGGATTATTTAAGTTTACCGTTGATGA TGATCTGCGGATTGTCTACGGCATCGGCGCCATCAAGGGCGTGGGTGAGGGGCCAGTTGAGTCGATTTTAGAGGCGCGTA AGGACGGTCCCTTTACAGATTTATTCGACTTTTGTGCCCGTATTGATCTTAAAAAGCTTAACAAGCGGGTGATTGAAAAG CTTATTTGCGCCGGCGCCTTAGATGCGCTTGGACCACACCGCGCCTCGATGATGGCAACCTTGCCTGAGGCGATAAGCGC TGCCGATCAGCACGCTAAGGCCGAGGCGATTGGCCAGCATGATATGTTTGGTCTGCTTAATAGCGATCCCGAGGACAGCA AGCAGCAGTTTGTTGAATGTACTCCGTGGCCGGATAAAATTTGGCTCGAAGGTGAGCGCGAAACCTTAGGGTTGTATTTA ACGGGCCATCCCATAAATCAATACCTTAAAGAGCTTAAGCATTATACTTCTGGGCGGCTCAAGGATGTGCATCCCACTGA TCGCGGTAAAACCGTGAAGGCGGCGGGGTTAGTGGTGGCGACCCGCGTGATGCTCACCAAACGCGGCTCGAAAATGGGCT TGTTGACCTTAGATGACAAGAGCGCTCGGCTCGAGGTGATGCTATTTACCGAAGCCTTTGAGAAGTTTAATCACCTGCTT GAAAAGGACCGGATCCTTATCTGCGAAGGTGAGGTGAGTTTCGATGATTTTGCCGGTGGCAACCGGATGACGGCGCGCAA TATTATTGATATTAGTGAGGCGCGTAGCCATTTTGCCAGTGCATTGGAGATTGATTTAGAGGCATCGCAGTTGACTCCGA GTATGCTCGATAGCATCGAGCAGGCGATAAGTCCATGGCGTAATGGCGCTGTGCCAGTACTGATTAACTACAGTCAAGCT CAGGCCAAGGGGCAGTTTAGATTGGCTGAAGCCTGGCGAGTTAACCCAAGTGATGAGTTGGTCTTTGCCTTGGAAAGTTT ACTTGGCCCCCATAAAGTGCGGATTGTATTTCCATAG
Upstream 100 bases:
>100_bases TCATTTCAGCTTGAGAGCAAAGTCACTAGCCCAAGGGCGGTGACTTTGTTAGTCTGCTTTTTAGTGATTGTTAACCTGCT ATTCAAAGATAATTCTAACT
Downstream 100 bases:
>100_bases TGAGTATCAGCCTTAAGCCGAGTTAAGCTTAGGGTTTTCGGTGGGGAAGAGGATGACTGCGCAGGATTTAAGTGTTCATA TAGCGCGATGGTTAGACAGC
Product: DNA polymerase III subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1158_residues MSDPRFVHLRVHSDFSMSDGVAKVKPILAQVEAKGMAAVALTDQNNLCGLVKFYGGCHGAGIKPIIGADFWMQVPGFEDE FCAVTIIAMDNEGYQNLTQIISQAYLRGQVQGRVVIDQEWLITYNPGILLLSGGKEGDIGKALLKGNNTQVESLCEFYQQ HFEGRYFLELLRTGRPDEERYLHMAVGVAQEKGIPVVATNQVVFLKPEDFEAHEIRVAIHDGFTLADPRRPKKYSEQQYL RSEDEMCELFADIPAALANTVEIAKRCNVTIRLNEYFLPNFPTGDMSIEDFLVDCSKKGLEERLAFLFPDPQVRAERRGE YDERLDVELKVINQMGFPGYFLIVMEFIQWGKDNGIPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMP DFDVDFCMDRRDEVIDHVAELYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPEPGMTLAKAFEVEPA LQESYDADEDVKDLIDMCRKLEGVTRNAGKHAGGVVIAPTKITDFSPLYCDAEGKNPVTQFDKNDVETAGLVKFDFLGLR TLTIVDWALEMINKVEVKNGRSPIRIEAIPLDDPASFRLLQRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRP GPLQSGMVDNFIERKHGREEVSYPDSQYQHESLKELLSPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM AKQRSIFKEGAIKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPPQFMAAVMSADMDNTDKIVTL VDECERMGLTIIPPDVNKGLFKFTVDDDLRIVYGIGAIKGVGEGPVESILEARKDGPFTDLFDFCARIDLKKLNKRVIEK LICAGALDALGPHRASMMATLPEAISAADQHAKAEAIGQHDMFGLLNSDPEDSKQQFVECTPWPDKIWLEGERETLGLYL TGHPINQYLKELKHYTSGRLKDVHPTDRGKTVKAAGLVVATRVMLTKRGSKMGLLTLDDKSARLEVMLFTEAFEKFNHLL EKDRILICEGEVSFDDFAGGNRMTARNIIDISEARSHFASALEIDLEASQLTPSMLDSIEQAISPWRNGAVPVLINYSQA QAKGQFRLAEAWRVNPSDELVFALESLLGPHKVRIVFP
Sequences:
NA
Specific function: NA
COG id: COG0587
COG function: function code L; DNA polymerase III, alpha subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA