| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
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Identifier: 24371667
GI number:
Start: 78057
End: 80339
Strand: Direct
Name: Not Available
Synonym: SO_0067
Alternate gene names: NA
Gene position: NA
Preceding gene: 24371666
Following gene: 24371672
Centisome position: NA
GC content: NA
Gene sequence:
>2283_bases ATGAGATCCGTTTACTTAGCCATAGTCGCCCTAGCCGTCATTTTGCTAGGGCTTAGGCTTTGGCCCGCGCAACCATTGAG TCAGCTGATGCCCAGTTCTCGTGAGGTGTTGGCTGCTGATGGGTCGTTATTGCGCTTAACCTTAGCCAGTGATGGCCAAT ATCGACTATGGCAAGATTTAGAGGATATCTCTCCAACCATGATTCAGGTCATGCTGTTGAAGGAGGATCGCTATTTCTAC TATCACCTCGGTGTTAATCCTGTCGCATTAGTACGTGCCACCTTCGCCACTTATGTTGATGGTGATCGTCAAGGTGGCTC GACGCTGACGATGCAGTTAGTTCGACGAGTTTATGAGATTAACAGCCGATCTGTGCTGGGTAAGTTGGAGCAGATCTTGG CGGCGTTTTGGTTAGAGGCTCGCTACAGTAAACGTGAACTATTAGAGGCTTATCTTAACCTCGCGCCCATGGGGGGAAAT ATCGAGGGCGTTGGTGCTGCGAGTCAGATTTACTTTCATAAAGTAGCTGGTGAGCTGTCTTTGAGCGAGGCTTTGAGCCT TGCGGTGATGCCCCAGAGTCCAGCGCGTCGAGCACGATTTCAGGCTGATTTTCAAGCGGCAAGAGATAGACTGGCGCTAT TTTGGCAGCAGACTTATCCGGATGATCCTCGTAATCAAGGTCTGCAGGTATTGACGGCTCTCGGTGCTGAACGTAACGAG CTGCCTTTTAAGGCGCCTCATTTTGCGCGTCGACAGCTACGCCAAGACGCAAGGATTGTTCACACAACAATAGAGCCTAA GTTACAAGCACTGCTAGAACTGCGCATTCGTCAGTATATTACGAGTAAGCGCCATTTAGGGGTGAATAATGCGACCGCGC TGTTGATCGATACCCGTGATCAGGCGATTAAGGCTTGGGTGGGCTCTGCTGATTTTTTTAATCCCATGATTTATGGTCAG GTTGATGGTGTTACCGCCCGCCGCTCCCCAGGTTCGACGCTCAAACCCTTCCTCTATGCTTTAGGTTTAGATCAGGGGAT TATTCATCCCCAGAGCATACTTAAAGATGCCCCAATGGCTTTTGGAAGTTTCGAGCCGGAGAATTTCGACCATCGATTCA CTGGCCCTATTAGTGCTCGAGATGCTTTGATCAAAAGCCGTAATCTCCCTGCCGTGTGGCTTGCGGGGCAGTTGACTGAT CCTAATTTGTACGGTTTTTTACGACAAGCCCAGATATTTGGATTAAGACAGGAAAGCCATTATGGATTGGCGCTTGCCTT AGGGGGAGGCGAGCTAACGATGATGGAACTTGGCAGGCTCTACCTTATGCTGGCAAGCGAAGGTCGTTATTATCCCTTAC GGGAGCGGACGGAGCAGCCCATTAATCCGCCGAGCATGCAGTTATTGAGTCCTGCAGCGAGTTTTCTGGTGTTGGATATG CTAAAAGACAATCCTCGTGCCGATGGGTTGCCAAGGCAGGGCTGGCGTGTGGCTTGGAAGACGGGGACCTCTTGGGGATT CCATGATGCGTGGAGCGCAGGGGTAGCAGGCCCCTATGTGTTGGTGGTCTGGGTGGGCAATTTCGATGCGACACCCAATG CTGCGTTTATCGGGGCAGAAATCGCAGGGCCATTATTCTTTAACATCACTGATGCTTTGCAGGCAAGCCTGCCGAGTACC GCTGATAGAATCTGGGCACCACCGAATACCGTAAAAAAAGTGAACATCTGTGCTGAGTCTGGTGAGTTACCTAACCTGTG GTGCCCTAAAGTGATCGAGGGATGGTTTATTCCGGGCGTCTCACCCGTCAAAGTGTCAACGCTACATCGTCCTGTTTGGG TGGATAACCAAACGGGTATGGCGGTATGTCCACCCTATGACGCCCAAACCCAGCATCAAGAAATCTTTGCCTTCTGGCCT TCGGACATGGCGAGTTTATTTGAGCAGGCGGGGTTACCGCGTAAGTTAGCGCCTCAATTGCCCGAATCGTGTCGTAACGC TATTCAGCTCAGTAACATCGATCCTGTGATTCGTTCCCCTTTGAAAAATGTCACCTATAGCTTGAGGCAAAGTCATTTGC ATGAGCATATTGCGTTGCTGGCCGATGCTGCGCCCGATGCGAGCATGTTGTACTGGTTTGTTGGACGGGATCTCATCGGT CAAAGCTTACCTAAGCAAGCCTTAGAATGGCGGCCCTCGACATCGGGTGACTATAAGTTATCAGTCACTGACGATAAGGG CCGTAGTACGAGTTTGAATCTTAATGTCAGCATATTGCACTAA
Upstream 100 bases:
>100_bases ATGCTGGTCATTTCCAAGTGCCTGCACCCTATGCAGAAGGGCTGTATGATCCTCTGCAACAAGCACTAGGAAAAGGTAGT GAATTAGTCATCTCGGCGCC
Downstream 100 bases:
>100_bases GCCTAATGGTTTTATGCTTAACCCTTAGTTTAGCGCGTTAATCTTTTGCTTTAAGTCGTATTCAGGCTCTGTCACTATTT TTTCCAGCACTTGCACTCGT
Product: penicillin-binding protein 1C, putative
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>760_residues MRSVYLAIVALAVILLGLRLWPAQPLSQLMPSSREVLAADGSLLRLTLASDGQYRLWQDLEDISPTMIQVMLLKEDRYFY YHLGVNPVALVRATFATYVDGDRQGGSTLTMQLVRRVYEINSRSVLGKLEQILAAFWLEARYSKRELLEAYLNLAPMGGN IEGVGAASQIYFHKVAGELSLSEALSLAVMPQSPARRARFQADFQAARDRLALFWQQTYPDDPRNQGLQVLTALGAERNE LPFKAPHFARRQLRQDARIVHTTIEPKLQALLELRIRQYITSKRHLGVNNATALLIDTRDQAIKAWVGSADFFNPMIYGQ VDGVTARRSPGSTLKPFLYALGLDQGIIHPQSILKDAPMAFGSFEPENFDHRFTGPISARDALIKSRNLPAVWLAGQLTD PNLYGFLRQAQIFGLRQESHYGLALALGGGELTMMELGRLYLMLASEGRYYPLRERTEQPINPPSMQLLSPAASFLVLDM LKDNPRADGLPRQGWRVAWKTGTSWGFHDAWSAGVAGPYVLVVWVGNFDATPNAAFIGAEIAGPLFFNITDALQASLPST ADRIWAPPNTVKKVNICAESGELPNLWCPKVIEGWFIPGVSPVKVSTLHRPVWVDNQTGMAVCPPYDAQTQHQEIFAFWP SDMASLFEQAGLPRKLAPQLPESCRNAIQLSNIDPVIRSPLKNVTYSLRQSHLHEHIALLADAAPDASMLYWFVGRDLIG QSLPKQALEWRPSTSGDYKLSVTDDKGRSTSLNLNVSILH
Sequences:
NA
Specific function: NA
COG id: COG4953
COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein PbpC
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA