Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24371666

GI number:

Start: 72364

End: 78060

Strand: Direct

Name: Not Available

Synonym: SO_0066

Alternate gene names: NA

Gene position: NA

Preceding gene: 24371665

Following gene: 24371667

Centisome position: NA

GC content: NA

Gene sequence:

>5697_bases
ATGAAGGCTCTGTTAGCAAATATCTTTGGTCATTGGCAATCACCACCTTGGATGCATTGGTGTAAAGCCCATCCAGGTAA
AAGTATAGGTAGCTTATTAGCCCTATTACTCGTCTCTGCTGGCCTATGGACAGCATGGGATTGGTATCAGCATTTACCTC
AGCCACAGACAGTGCAGTCGAGCATATTCGCACCATCATTGACTAACTATGAGGCTGATAAGCCTGAGGTTGCACCGCTA
GTTATTCGTTTTAGCGATTCAGTTGCCCCCCTCGATAATATTGGTAAACCCTTGAATAAGGGTATCAAATTGAGCCCTGA
GATTGCAGGGCAATGGCGTTGGTCTAGTGATAAACATTTAGAGTTTCAACCTGACGCTGACTGGCCGGTGGATAAAACCT
ACAGTCTCACTTTGGATGGTGATGCATTATTAGCCAGCCATATCCTGCTGGATAACTATATTTTTGAGTTTAAGACAGCT
CCTTTCAGCGCCAAAATTAGCGATGCGCGCCTTTACTACGAACCGAATCAGCCAAATATTCAAAAGGTTGTCGCAACCGT
TCATTTTAGTCATCCCGTCGCAACTCAGACGGTAAAGTCGGCGTTATCTGTAGTGTTAAGCCCTGGTTTAACCTATAGCC
AAGGCAGCGATTATCAACTGACCTTCGATGATAAACACTTAAATGCTTATATTCATACTGCGCCGTTAGCGACACCATTA
GAGCCGAGTACGGTTAAATTAGAACTGAGTAATAAAATTAAAGCGGCTTTCGGTGGTAATGCGGCCGAAGAAGACAGTAC
TGAGGTGAGTGTTCCTGGGCGTTATCAGTTAAGTTTTTCCGCTGCTCAAATTAGTTTCGCCAAAAACGATCAAGAAGAGC
CCGAGCCTGTATTAACCATGGAGAGTTCTCGTCCAGTGGCGGATGCGGCACTTAAGGGTAAGGTCGAGGCTTGGCTGCTG
CCGCCAAAAGATCCACAAGGAAATACCTATTGGGGTACTCAAAACATCACTGATACTGTGTTGCGCAAAGCATCAAAAGT
GACTTTGATCCAAAACCCAGGACCTGAAGGGCTTAATCAGTTACATAGTTTTAAATTTCAAGCACCTGTTGGTCGTTATC
TTGCTGTTAGGGTCGCTAAGCATGTGGAAGGCCAAGGGGGCTATTTGTCCCGTGATGCTGCTTTTTCTGTGGTGCGAATG
CCTGAATATCCAAAGGCGCTTGCGTTCCTCGGCGAGGGGGCTCTGCTGACGTTAAATGATGATCAGCGTTTAGGCTATCT
CGTGAGAGGTGTTGCAGATGTCAGGATTGAGGTTGCTCAACTGTTGCCCGACCAAATTCATCAACTGGTCGATGAGGATT
CGGGTATTTTCAAGGTTCAGTATTTTAACAATAACCTCTTCGATCGATTGGTCACACGTACCGAAATAATCCAAAAATTT
GTCACGGATGACCCCGCTAAAACCTCCTATGGTGAGGTCGATCTTAAATCCTACTTTGCTGATAAGCGCGGCATTTTTGT
GCTTAAGTTGACATCCGCCGAAGATCATAATGACGATACCTTCGATTATTATCCACGTGAAGCACATGATTTACGTTTTG
TCGTCGTAACCGATATGGGGATTTTGGCTAAGCGCAGTGTCGACGGCAGCTTGGATATATTTGTGCAGTCTTTATCCCAG
GGGCTACCGATTGCCAATGCTAAGGTGGACGTAGTTGGGCGCAACGGTCTGTCGGTGGCGGAAGGATTTACTGATCTAGG
CGGCCATGTCCATTTGCCTAAATTAGGCCAATTGCGCCGTGAAAAAAGACCGCTCTTCTATCGAGTAGAAAAAGCCGGCG
ATGTTTCATTCTTGCCGATAGGCGACTGGCGCCGCGAGCTTGATATGTCGCGTTTTGATATTGGCGGTAGCAACGAGAGT
GAAGATCCAAATACGCTGAGTGCCTACTTGTTTACTGACCGAGGATTATATCGCCCTGGTGAAACCGCCCACGTGGCTAG
TTTAGTCAGGAGCCAGAGTTGGGGCGCTTCTTTAGATGGCTTGCCTGTCAAAATGGTGGTGACCGATCCGCGTGGCATTG
ATGTATTAGATCGTACCTTTAATTTAGATTCGAGTGGTTTTAATAGCTTGGATTTTAGTAGTACAGAAGCCGCCGTTGCG
GGTGAGTACACTGCGAGCCTGTCATTAATTCGCGATAAACATAATTTGACTCGTTTGGGCGAGGAGAGCTTTAAAGTTCG
CGATTTTGAACCCGACCGGATCAAGGTCAGAGTCACGCTTGGCGCAACCGAAAGCGGCACCAGCATCGGTTGGTTAAAAC
CCGAAGAGGTGTCGGCAAAAGTTCAGGCTGAGCAACTGTTTGGTGGACCTGCAGGTGATCGACGCGTGACTGGCGAAATG
GTGTTGTCGCCCACGGATATTAGTTTTAAAGAATTGCCTGGTTATTACTTTGGCGTACAGGGGGAGCTGAAGGAATCCTT
CCGTGAGACCCTCGCGGAAGCGAAAACCAATGAGGAAGGTGTTGCTGGGCTTAATCTAGCCTTAGATCGGTTTGGACAAA
CGACATTCAAGTTACATTTGCTCGCAAAAGTGTATGAGGCTGGCTCAGGTAGAAATGTGAGCGCTCAAGATAAGGCATTG
GTCTCGAACGCCGATTTCCTGCTGGGTTATAAAGCCGATGGGGATTTGGGTTTTATAAGTAAAGATGGGGAGCGGCATCT
TAAGTTAGTGGCTGTGGGGCAAGATTTAAAACCTCGAGTCACACAACTTCAGGCGGAGCGTATTGCTCGGCGTTGGGTCT
CCGTGTTGGTGAAACAACGTGATGGCACCTATCGTTACGAGTCTCGTCGTAAAGATGAGCTATTAGAAAGCAATACCTTG
CAACTTAATAAGGGGCAACTCGATATTGCGCTCGATACAAGTGAACCCGGTGATTACCAACTCAGGTTCATTGATGCCGA
GGGGCATCAGCTTAACCAAATTGACTATAGTGTTGCAGGTCAAGGAAATGCGAGCCGTGCCTTGGAGCGTAATGCTGAAC
TCCAGCTCAAGTTAGACAAAGATGAGTATCAGCCCGGTGAGATGATCAATATCGCGATTCAAGCACCCTATACTGGTGCT
GGTCTTATTACCATTGAGCGAGATAAAGTTTATGCATTTGAATGGTTTAATGCAGACAGTAGTCGCTCTGTGCAGTCAAT
TCAATTACCCGAGGGCATAGAAGGCAACGCCTATGTGAACGTGCAGTTCTTGCGTGCGCCGGATTCTGATGAGATTTTTA
TGAGTCCGTTATCCTATGGGGTGAAACCCATTAAGATCGATCTCGGCGCGCGTCGTCAGCCCTTGTCGTTAAGTCTGCCG
GAGCAGATGAAGCCGGGTAATGATCTCAAAATAGCCTTGAACTTGCCTACGGACTCAAAAGTCGTGGTCTTTGGGGTGGA
TGAAGGCATATTACAGGTCGCCCGCTATAAGGCTCCCGATCCATTAGGACACTTTTTTGCGAAAAAGGCATTGACGGTAA
ACTCGAGCCAAATTTTAGACTTGTTATTACCGGATCTTAACGTGTTAATGCGTAATGCCGCACCGGGTGGCGACGCAGAA
GCGTTGCTTGCTGCCAATTTAAATCCCTTTAAGCGTAAGCGCGCATCACCCGTCGTTTATTGGTCTGGATTACAGGATCT
CAGTGCCGGTGAACAGCAGTTTAATTACAGTGTGCCCGATACCTTTAATGGAAAAATCCACTTTTTTGCGGTCAGTGTGA
CAGACAGCAATATGGGGGTGGCGGAAGCTTCGGTAAACGTGAAGGCGCCTGTTGTGATGACTCCGAACGTGCCCGCGTTT
ATGGCTCCGGGTGATGAGGCTGAAATCACATTGGGTCTCTATAACACTGAGTCTACGTCTACCCATGTCCAAGTGGCGTT
GTCTTTGGAGGGGGGATTAGCACCGTTAGCGGGGGCTGAGCAATCATTCGACATTCTGCCAGGGCAAGAGGTAACGGCAC
GTTTTACACTCAAGGCAATTGAGCCTTTAGGGGAGGCGAAGTTACATTGGATGCTCAAGGGGGAACAAGGAGACTTCAAG
ATTGGAGAGAGCATTTCTATCCGGCCCCTGACAACGCATCGTGTACAACTACAGACGGCAGTATTGGATAGTGCAGAGAA
GCAATTATCGCTGGAACGGCAGTTATTTGAGCCGTTTAGTCGCAAAGAGGCCGGACTTCAAAGCAGTCCCTTGGTCTGGG
CGCAGGGCTTAAGTGCTTATCTTGAGAGTTATCCCCATGCTTGCACCGAACAGCTGGTGTCTAAATCGGTTCCTGCACTG
GTATTGGGAAAACCGCAGGATAATTTATCAGCCTTTAATCAACTGATGACTCAACTCCGTAGCCGCCAGAACAGTGAAGG
TGCCTTCGGTGGCTGGGCGGCTAATCCCGTTGTAGAACCTATGGTCACCCTGTACGTCGTGGATATGTTATTGGATGCCC
AAGGTAACGGTTATGCTGTACCGCAGGATATGTTAGACAGAGCCAATGGCTATTTATCTGAACTGAGCAGCAGCCCAAGT
AGTGGTTTAAGCGAGTTACGTCAGCGTGCCTATGGCGCTTATCTCTTGGCCCGCCAAGGAGTGCAGGTCAGTGGTGCTCT
GGCCGATATTCGCGATCGATTACAGCGTTATTATCCTAAAGACTGGCAGTCGGATATTGCGAGCGCTTGGCTAGCAGCGA
GTTTTACACTTATGCAGCAACAGACGTTGGCTAAGCCGCTTTGGGACGCGCAAGTATGGGAATTAATGCAGAAAACGCCA
AAGCATCTTGATCTGTATTTAGATCCTTTAGTTCATGATGCTCAGTTATTGACCCTAGTCGCCCGTCACGCCCCAGAACG
CCTTGCTAAGCTACCTGAGGGATTGTTAGAACGTGTGGGTAACTGGTTATCGGCACAACGCTATACCTCTCTATCTGCAG
GCACGTTAGTGCGGGCGCTGGCTGCCTACGATCAGCAAGCGACCAGTGGTGAGTTGACGTTAACAGCACAAGTGGCGGAC
AAGTGGATCATTCAGAGTCTGCCTAAGGCTGAGTTACCGTTTACTACCAATAAGATCAAAGTCCAAAAGACGGGTGATGC
TGATGCTTTCTACATGTCGATGGAATCCGGTTTCGATAAGCAGCCCGTTGCCGCATTCAGTCACGGTTTAGAGGTGAGTC
GCGATTACTTAGACCTGAAGGGACAGCCGCTTAAGGGATTGAAAGTCGGTGAGGAGTTCTTGGTTCGGTTAAGGCTGCGT
GCGACATCCTTTGAACAACTGGAACAGGTCGTCGTTATCGATTTGCTTCCAGGCGGCGTTGAGCCTGTATACCGAGATAA
AGAGGTGGTTATGGTTGTTACCGTTGTTCAAGAAGGTGAAGAAGGCGAAGAAAGTGATGAAGAAGGTGACGGCGAAGAAG
GCGAAGCTTTCAATGGCTGGCAGCCGCCGATAGGTGTTGGTGAACAGAGTGATTGGTCCCCTACATGGCTCAATGTCCGT
GAGGATCGAGTCGTATTGTATGGTACGGCTAGCCGTGATGTGGGAACGTTTACTTATAAAGCACGCGCCACCAATGCTGG
TCATTTCCAAGTGCCTGCACCCTATGCAGAAGGGCTGTATGATCCTCTGCAACAAGCACTAGGAAAAGGTAGTGAATTAG
TCATCTCGGCGCCATGA

Upstream 100 bases:

>100_bases
ATTACGCGGCTTGTTTGGGGGTTTAACTTAGTATTGGTCATTCTGCAATTGATGCATCCGTGGGGATGTTGGAAAAGGTG
GAATGTTGGAGAAGTTAGGG

Downstream 100 bases:

>100_bases
GATCCGTTTACTTAGCCATAGTCGCCCTAGCCGTCATTTTGCTAGGGCTTAGGCTTTGGCCCGCGCAACCATTGAGTCAG
CTGATGCCCAGTTCTCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1898_residues
MKALLANIFGHWQSPPWMHWCKAHPGKSIGSLLALLLVSAGLWTAWDWYQHLPQPQTVQSSIFAPSLTNYEADKPEVAPL
VIRFSDSVAPLDNIGKPLNKGIKLSPEIAGQWRWSSDKHLEFQPDADWPVDKTYSLTLDGDALLASHILLDNYIFEFKTA
PFSAKISDARLYYEPNQPNIQKVVATVHFSHPVATQTVKSALSVVLSPGLTYSQGSDYQLTFDDKHLNAYIHTAPLATPL
EPSTVKLELSNKIKAAFGGNAAEEDSTEVSVPGRYQLSFSAAQISFAKNDQEEPEPVLTMESSRPVADAALKGKVEAWLL
PPKDPQGNTYWGTQNITDTVLRKASKVTLIQNPGPEGLNQLHSFKFQAPVGRYLAVRVAKHVEGQGGYLSRDAAFSVVRM
PEYPKALAFLGEGALLTLNDDQRLGYLVRGVADVRIEVAQLLPDQIHQLVDEDSGIFKVQYFNNNLFDRLVTRTEIIQKF
VTDDPAKTSYGEVDLKSYFADKRGIFVLKLTSAEDHNDDTFDYYPREAHDLRFVVVTDMGILAKRSVDGSLDIFVQSLSQ
GLPIANAKVDVVGRNGLSVAEGFTDLGGHVHLPKLGQLRREKRPLFYRVEKAGDVSFLPIGDWRRELDMSRFDIGGSNES
EDPNTLSAYLFTDRGLYRPGETAHVASLVRSQSWGASLDGLPVKMVVTDPRGIDVLDRTFNLDSSGFNSLDFSSTEAAVA
GEYTASLSLIRDKHNLTRLGEESFKVRDFEPDRIKVRVTLGATESGTSIGWLKPEEVSAKVQAEQLFGGPAGDRRVTGEM
VLSPTDISFKELPGYYFGVQGELKESFRETLAEAKTNEEGVAGLNLALDRFGQTTFKLHLLAKVYEAGSGRNVSAQDKAL
VSNADFLLGYKADGDLGFISKDGERHLKLVAVGQDLKPRVTQLQAERIARRWVSVLVKQRDGTYRYESRRKDELLESNTL
QLNKGQLDIALDTSEPGDYQLRFIDAEGHQLNQIDYSVAGQGNASRALERNAELQLKLDKDEYQPGEMINIAIQAPYTGA
GLITIERDKVYAFEWFNADSSRSVQSIQLPEGIEGNAYVNVQFLRAPDSDEIFMSPLSYGVKPIKIDLGARRQPLSLSLP
EQMKPGNDLKIALNLPTDSKVVVFGVDEGILQVARYKAPDPLGHFFAKKALTVNSSQILDLLLPDLNVLMRNAAPGGDAE
ALLAANLNPFKRKRASPVVYWSGLQDLSAGEQQFNYSVPDTFNGKIHFFAVSVTDSNMGVAEASVNVKAPVVMTPNVPAF
MAPGDEAEITLGLYNTESTSTHVQVALSLEGGLAPLAGAEQSFDILPGQEVTARFTLKAIEPLGEAKLHWMLKGEQGDFK
IGESISIRPLTTHRVQLQTAVLDSAEKQLSLERQLFEPFSRKEAGLQSSPLVWAQGLSAYLESYPHACTEQLVSKSVPAL
VLGKPQDNLSAFNQLMTQLRSRQNSEGAFGGWAANPVVEPMVTLYVVDMLLDAQGNGYAVPQDMLDRANGYLSELSSSPS
SGLSELRQRAYGAYLLARQGVQVSGALADIRDRLQRYYPKDWQSDIASAWLAASFTLMQQQTLAKPLWDAQVWELMQKTP
KHLDLYLDPLVHDAQLLTLVARHAPERLAKLPEGLLERVGNWLSAQRYTSLSAGTLVRALAAYDQQATSGELTLTAQVAD
KWIIQSLPKAELPFTTNKIKVQKTGDADAFYMSMESGFDKQPVAAFSHGLEVSRDYLDLKGQPLKGLKVGEEFLVRLRLR
ATSFEQLEQVVVIDLLPGGVEPVYRDKEVVMVVTVVQEGEEGEESDEEGDGEEGEAFNGWQPPIGVGEQSDWSPTWLNVR
EDRVVLYGTASRDVGTFTYKARATNAGHFQVPAPYAEGLYDPLQQALGKGSELVISAP

Sequences:
NA

Specific function: NA

COG id: COG2373

COG function: function code R; Large extracellular alpha-helical protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA