| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
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Identifier: 24371666
GI number:
Start: 72364
End: 78060
Strand: Direct
Name: Not Available
Synonym: SO_0066
Alternate gene names: NA
Gene position: NA
Preceding gene: 24371665
Following gene: 24371667
Centisome position: NA
GC content: NA
Gene sequence:
>5697_bases ATGAAGGCTCTGTTAGCAAATATCTTTGGTCATTGGCAATCACCACCTTGGATGCATTGGTGTAAAGCCCATCCAGGTAA AAGTATAGGTAGCTTATTAGCCCTATTACTCGTCTCTGCTGGCCTATGGACAGCATGGGATTGGTATCAGCATTTACCTC AGCCACAGACAGTGCAGTCGAGCATATTCGCACCATCATTGACTAACTATGAGGCTGATAAGCCTGAGGTTGCACCGCTA GTTATTCGTTTTAGCGATTCAGTTGCCCCCCTCGATAATATTGGTAAACCCTTGAATAAGGGTATCAAATTGAGCCCTGA GATTGCAGGGCAATGGCGTTGGTCTAGTGATAAACATTTAGAGTTTCAACCTGACGCTGACTGGCCGGTGGATAAAACCT ACAGTCTCACTTTGGATGGTGATGCATTATTAGCCAGCCATATCCTGCTGGATAACTATATTTTTGAGTTTAAGACAGCT CCTTTCAGCGCCAAAATTAGCGATGCGCGCCTTTACTACGAACCGAATCAGCCAAATATTCAAAAGGTTGTCGCAACCGT TCATTTTAGTCATCCCGTCGCAACTCAGACGGTAAAGTCGGCGTTATCTGTAGTGTTAAGCCCTGGTTTAACCTATAGCC AAGGCAGCGATTATCAACTGACCTTCGATGATAAACACTTAAATGCTTATATTCATACTGCGCCGTTAGCGACACCATTA GAGCCGAGTACGGTTAAATTAGAACTGAGTAATAAAATTAAAGCGGCTTTCGGTGGTAATGCGGCCGAAGAAGACAGTAC TGAGGTGAGTGTTCCTGGGCGTTATCAGTTAAGTTTTTCCGCTGCTCAAATTAGTTTCGCCAAAAACGATCAAGAAGAGC CCGAGCCTGTATTAACCATGGAGAGTTCTCGTCCAGTGGCGGATGCGGCACTTAAGGGTAAGGTCGAGGCTTGGCTGCTG CCGCCAAAAGATCCACAAGGAAATACCTATTGGGGTACTCAAAACATCACTGATACTGTGTTGCGCAAAGCATCAAAAGT GACTTTGATCCAAAACCCAGGACCTGAAGGGCTTAATCAGTTACATAGTTTTAAATTTCAAGCACCTGTTGGTCGTTATC TTGCTGTTAGGGTCGCTAAGCATGTGGAAGGCCAAGGGGGCTATTTGTCCCGTGATGCTGCTTTTTCTGTGGTGCGAATG CCTGAATATCCAAAGGCGCTTGCGTTCCTCGGCGAGGGGGCTCTGCTGACGTTAAATGATGATCAGCGTTTAGGCTATCT CGTGAGAGGTGTTGCAGATGTCAGGATTGAGGTTGCTCAACTGTTGCCCGACCAAATTCATCAACTGGTCGATGAGGATT CGGGTATTTTCAAGGTTCAGTATTTTAACAATAACCTCTTCGATCGATTGGTCACACGTACCGAAATAATCCAAAAATTT GTCACGGATGACCCCGCTAAAACCTCCTATGGTGAGGTCGATCTTAAATCCTACTTTGCTGATAAGCGCGGCATTTTTGT GCTTAAGTTGACATCCGCCGAAGATCATAATGACGATACCTTCGATTATTATCCACGTGAAGCACATGATTTACGTTTTG TCGTCGTAACCGATATGGGGATTTTGGCTAAGCGCAGTGTCGACGGCAGCTTGGATATATTTGTGCAGTCTTTATCCCAG GGGCTACCGATTGCCAATGCTAAGGTGGACGTAGTTGGGCGCAACGGTCTGTCGGTGGCGGAAGGATTTACTGATCTAGG CGGCCATGTCCATTTGCCTAAATTAGGCCAATTGCGCCGTGAAAAAAGACCGCTCTTCTATCGAGTAGAAAAAGCCGGCG ATGTTTCATTCTTGCCGATAGGCGACTGGCGCCGCGAGCTTGATATGTCGCGTTTTGATATTGGCGGTAGCAACGAGAGT GAAGATCCAAATACGCTGAGTGCCTACTTGTTTACTGACCGAGGATTATATCGCCCTGGTGAAACCGCCCACGTGGCTAG TTTAGTCAGGAGCCAGAGTTGGGGCGCTTCTTTAGATGGCTTGCCTGTCAAAATGGTGGTGACCGATCCGCGTGGCATTG ATGTATTAGATCGTACCTTTAATTTAGATTCGAGTGGTTTTAATAGCTTGGATTTTAGTAGTACAGAAGCCGCCGTTGCG GGTGAGTACACTGCGAGCCTGTCATTAATTCGCGATAAACATAATTTGACTCGTTTGGGCGAGGAGAGCTTTAAAGTTCG CGATTTTGAACCCGACCGGATCAAGGTCAGAGTCACGCTTGGCGCAACCGAAAGCGGCACCAGCATCGGTTGGTTAAAAC CCGAAGAGGTGTCGGCAAAAGTTCAGGCTGAGCAACTGTTTGGTGGACCTGCAGGTGATCGACGCGTGACTGGCGAAATG GTGTTGTCGCCCACGGATATTAGTTTTAAAGAATTGCCTGGTTATTACTTTGGCGTACAGGGGGAGCTGAAGGAATCCTT CCGTGAGACCCTCGCGGAAGCGAAAACCAATGAGGAAGGTGTTGCTGGGCTTAATCTAGCCTTAGATCGGTTTGGACAAA CGACATTCAAGTTACATTTGCTCGCAAAAGTGTATGAGGCTGGCTCAGGTAGAAATGTGAGCGCTCAAGATAAGGCATTG GTCTCGAACGCCGATTTCCTGCTGGGTTATAAAGCCGATGGGGATTTGGGTTTTATAAGTAAAGATGGGGAGCGGCATCT TAAGTTAGTGGCTGTGGGGCAAGATTTAAAACCTCGAGTCACACAACTTCAGGCGGAGCGTATTGCTCGGCGTTGGGTCT CCGTGTTGGTGAAACAACGTGATGGCACCTATCGTTACGAGTCTCGTCGTAAAGATGAGCTATTAGAAAGCAATACCTTG CAACTTAATAAGGGGCAACTCGATATTGCGCTCGATACAAGTGAACCCGGTGATTACCAACTCAGGTTCATTGATGCCGA GGGGCATCAGCTTAACCAAATTGACTATAGTGTTGCAGGTCAAGGAAATGCGAGCCGTGCCTTGGAGCGTAATGCTGAAC TCCAGCTCAAGTTAGACAAAGATGAGTATCAGCCCGGTGAGATGATCAATATCGCGATTCAAGCACCCTATACTGGTGCT GGTCTTATTACCATTGAGCGAGATAAAGTTTATGCATTTGAATGGTTTAATGCAGACAGTAGTCGCTCTGTGCAGTCAAT TCAATTACCCGAGGGCATAGAAGGCAACGCCTATGTGAACGTGCAGTTCTTGCGTGCGCCGGATTCTGATGAGATTTTTA TGAGTCCGTTATCCTATGGGGTGAAACCCATTAAGATCGATCTCGGCGCGCGTCGTCAGCCCTTGTCGTTAAGTCTGCCG GAGCAGATGAAGCCGGGTAATGATCTCAAAATAGCCTTGAACTTGCCTACGGACTCAAAAGTCGTGGTCTTTGGGGTGGA TGAAGGCATATTACAGGTCGCCCGCTATAAGGCTCCCGATCCATTAGGACACTTTTTTGCGAAAAAGGCATTGACGGTAA ACTCGAGCCAAATTTTAGACTTGTTATTACCGGATCTTAACGTGTTAATGCGTAATGCCGCACCGGGTGGCGACGCAGAA GCGTTGCTTGCTGCCAATTTAAATCCCTTTAAGCGTAAGCGCGCATCACCCGTCGTTTATTGGTCTGGATTACAGGATCT CAGTGCCGGTGAACAGCAGTTTAATTACAGTGTGCCCGATACCTTTAATGGAAAAATCCACTTTTTTGCGGTCAGTGTGA CAGACAGCAATATGGGGGTGGCGGAAGCTTCGGTAAACGTGAAGGCGCCTGTTGTGATGACTCCGAACGTGCCCGCGTTT ATGGCTCCGGGTGATGAGGCTGAAATCACATTGGGTCTCTATAACACTGAGTCTACGTCTACCCATGTCCAAGTGGCGTT GTCTTTGGAGGGGGGATTAGCACCGTTAGCGGGGGCTGAGCAATCATTCGACATTCTGCCAGGGCAAGAGGTAACGGCAC GTTTTACACTCAAGGCAATTGAGCCTTTAGGGGAGGCGAAGTTACATTGGATGCTCAAGGGGGAACAAGGAGACTTCAAG ATTGGAGAGAGCATTTCTATCCGGCCCCTGACAACGCATCGTGTACAACTACAGACGGCAGTATTGGATAGTGCAGAGAA GCAATTATCGCTGGAACGGCAGTTATTTGAGCCGTTTAGTCGCAAAGAGGCCGGACTTCAAAGCAGTCCCTTGGTCTGGG CGCAGGGCTTAAGTGCTTATCTTGAGAGTTATCCCCATGCTTGCACCGAACAGCTGGTGTCTAAATCGGTTCCTGCACTG GTATTGGGAAAACCGCAGGATAATTTATCAGCCTTTAATCAACTGATGACTCAACTCCGTAGCCGCCAGAACAGTGAAGG TGCCTTCGGTGGCTGGGCGGCTAATCCCGTTGTAGAACCTATGGTCACCCTGTACGTCGTGGATATGTTATTGGATGCCC AAGGTAACGGTTATGCTGTACCGCAGGATATGTTAGACAGAGCCAATGGCTATTTATCTGAACTGAGCAGCAGCCCAAGT AGTGGTTTAAGCGAGTTACGTCAGCGTGCCTATGGCGCTTATCTCTTGGCCCGCCAAGGAGTGCAGGTCAGTGGTGCTCT GGCCGATATTCGCGATCGATTACAGCGTTATTATCCTAAAGACTGGCAGTCGGATATTGCGAGCGCTTGGCTAGCAGCGA GTTTTACACTTATGCAGCAACAGACGTTGGCTAAGCCGCTTTGGGACGCGCAAGTATGGGAATTAATGCAGAAAACGCCA AAGCATCTTGATCTGTATTTAGATCCTTTAGTTCATGATGCTCAGTTATTGACCCTAGTCGCCCGTCACGCCCCAGAACG CCTTGCTAAGCTACCTGAGGGATTGTTAGAACGTGTGGGTAACTGGTTATCGGCACAACGCTATACCTCTCTATCTGCAG GCACGTTAGTGCGGGCGCTGGCTGCCTACGATCAGCAAGCGACCAGTGGTGAGTTGACGTTAACAGCACAAGTGGCGGAC AAGTGGATCATTCAGAGTCTGCCTAAGGCTGAGTTACCGTTTACTACCAATAAGATCAAAGTCCAAAAGACGGGTGATGC TGATGCTTTCTACATGTCGATGGAATCCGGTTTCGATAAGCAGCCCGTTGCCGCATTCAGTCACGGTTTAGAGGTGAGTC GCGATTACTTAGACCTGAAGGGACAGCCGCTTAAGGGATTGAAAGTCGGTGAGGAGTTCTTGGTTCGGTTAAGGCTGCGT GCGACATCCTTTGAACAACTGGAACAGGTCGTCGTTATCGATTTGCTTCCAGGCGGCGTTGAGCCTGTATACCGAGATAA AGAGGTGGTTATGGTTGTTACCGTTGTTCAAGAAGGTGAAGAAGGCGAAGAAAGTGATGAAGAAGGTGACGGCGAAGAAG GCGAAGCTTTCAATGGCTGGCAGCCGCCGATAGGTGTTGGTGAACAGAGTGATTGGTCCCCTACATGGCTCAATGTCCGT GAGGATCGAGTCGTATTGTATGGTACGGCTAGCCGTGATGTGGGAACGTTTACTTATAAAGCACGCGCCACCAATGCTGG TCATTTCCAAGTGCCTGCACCCTATGCAGAAGGGCTGTATGATCCTCTGCAACAAGCACTAGGAAAAGGTAGTGAATTAG TCATCTCGGCGCCATGA
Upstream 100 bases:
>100_bases ATTACGCGGCTTGTTTGGGGGTTTAACTTAGTATTGGTCATTCTGCAATTGATGCATCCGTGGGGATGTTGGAAAAGGTG GAATGTTGGAGAAGTTAGGG
Downstream 100 bases:
>100_bases GATCCGTTTACTTAGCCATAGTCGCCCTAGCCGTCATTTTGCTAGGGCTTAGGCTTTGGCCCGCGCAACCATTGAGTCAG CTGATGCCCAGTTCTCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1898_residues MKALLANIFGHWQSPPWMHWCKAHPGKSIGSLLALLLVSAGLWTAWDWYQHLPQPQTVQSSIFAPSLTNYEADKPEVAPL VIRFSDSVAPLDNIGKPLNKGIKLSPEIAGQWRWSSDKHLEFQPDADWPVDKTYSLTLDGDALLASHILLDNYIFEFKTA PFSAKISDARLYYEPNQPNIQKVVATVHFSHPVATQTVKSALSVVLSPGLTYSQGSDYQLTFDDKHLNAYIHTAPLATPL EPSTVKLELSNKIKAAFGGNAAEEDSTEVSVPGRYQLSFSAAQISFAKNDQEEPEPVLTMESSRPVADAALKGKVEAWLL PPKDPQGNTYWGTQNITDTVLRKASKVTLIQNPGPEGLNQLHSFKFQAPVGRYLAVRVAKHVEGQGGYLSRDAAFSVVRM PEYPKALAFLGEGALLTLNDDQRLGYLVRGVADVRIEVAQLLPDQIHQLVDEDSGIFKVQYFNNNLFDRLVTRTEIIQKF VTDDPAKTSYGEVDLKSYFADKRGIFVLKLTSAEDHNDDTFDYYPREAHDLRFVVVTDMGILAKRSVDGSLDIFVQSLSQ GLPIANAKVDVVGRNGLSVAEGFTDLGGHVHLPKLGQLRREKRPLFYRVEKAGDVSFLPIGDWRRELDMSRFDIGGSNES EDPNTLSAYLFTDRGLYRPGETAHVASLVRSQSWGASLDGLPVKMVVTDPRGIDVLDRTFNLDSSGFNSLDFSSTEAAVA GEYTASLSLIRDKHNLTRLGEESFKVRDFEPDRIKVRVTLGATESGTSIGWLKPEEVSAKVQAEQLFGGPAGDRRVTGEM VLSPTDISFKELPGYYFGVQGELKESFRETLAEAKTNEEGVAGLNLALDRFGQTTFKLHLLAKVYEAGSGRNVSAQDKAL VSNADFLLGYKADGDLGFISKDGERHLKLVAVGQDLKPRVTQLQAERIARRWVSVLVKQRDGTYRYESRRKDELLESNTL QLNKGQLDIALDTSEPGDYQLRFIDAEGHQLNQIDYSVAGQGNASRALERNAELQLKLDKDEYQPGEMINIAIQAPYTGA GLITIERDKVYAFEWFNADSSRSVQSIQLPEGIEGNAYVNVQFLRAPDSDEIFMSPLSYGVKPIKIDLGARRQPLSLSLP EQMKPGNDLKIALNLPTDSKVVVFGVDEGILQVARYKAPDPLGHFFAKKALTVNSSQILDLLLPDLNVLMRNAAPGGDAE ALLAANLNPFKRKRASPVVYWSGLQDLSAGEQQFNYSVPDTFNGKIHFFAVSVTDSNMGVAEASVNVKAPVVMTPNVPAF MAPGDEAEITLGLYNTESTSTHVQVALSLEGGLAPLAGAEQSFDILPGQEVTARFTLKAIEPLGEAKLHWMLKGEQGDFK IGESISIRPLTTHRVQLQTAVLDSAEKQLSLERQLFEPFSRKEAGLQSSPLVWAQGLSAYLESYPHACTEQLVSKSVPAL VLGKPQDNLSAFNQLMTQLRSRQNSEGAFGGWAANPVVEPMVTLYVVDMLLDAQGNGYAVPQDMLDRANGYLSELSSSPS SGLSELRQRAYGAYLLARQGVQVSGALADIRDRLQRYYPKDWQSDIASAWLAASFTLMQQQTLAKPLWDAQVWELMQKTP KHLDLYLDPLVHDAQLLTLVARHAPERLAKLPEGLLERVGNWLSAQRYTSLSAGTLVRALAAYDQQATSGELTLTAQVAD KWIIQSLPKAELPFTTNKIKVQKTGDADAFYMSMESGFDKQPVAAFSHGLEVSRDYLDLKGQPLKGLKVGEEFLVRLRLR ATSFEQLEQVVVIDLLPGGVEPVYRDKEVVMVVTVVQEGEEGEESDEEGDGEEGEAFNGWQPPIGVGEQSDWSPTWLNVR EDRVVLYGTASRDVGTFTYKARATNAGHFQVPAPYAEGLYDPLQQALGKGSELVISAP
Sequences:
NA
Specific function: NA
COG id: COG2373
COG function: function code R; Large extracellular alpha-helical protein
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA