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The map label for this gene is whiA [H]

Identifier: 239618390

GI number: 239618390

Start: 2157565

End: 2158509

Strand: Direct

Name: whiA [H]

Synonym: Kole_2030

Alternate gene names: 239618390

Gene position: 2157565-2158509 (Clockwise)

Preceding gene: 239618389

Following gene: 239618391

Centisome position: 93.72

GC content: 42.75

Gene sequence:

>945_bases
ATGAGTTTCTCTGAGAATGTTAAAGAAGAATTGTATCATCTTCCTTTGGAAGATAGTGCCGAAGCTAAAGCTGAGTTCTT
CGGCTTCGTAAAATCAAGAGGAGCACTCAGGATACGTTCAAACAACACCTTTCTGGTCATACCTTTGGGATCGATATCGA
GTCTGAAACGCCTTTATCTGTTGAGCAAGTTTCTTGACCTTTCTCTTTTTGAAACGCAGGTAAAGGAAACCCTGAGATTC
AAACATGTTCGTGGCGGAGAAATAATCTATCGTTTTTCGGATGTAGAAAAGCTCTTAAAGATGGCAAAAATATCGATTAC
CGGTGATTCTCTACCACCTCTGGTTAAAAAGGATCCCGTGTATTTTGGAGCCTTTGTCAGGGGATTGTTTCTAGCTGGCG
GCTCCATTGTAGATCCCTCTAAGGGGTATCATCTCGAAGTAATACTCGATACAACGAGAGAGTTTGTCGAAAGATTGAAA
GCGCACCTATGGAGCGCTTTCAACATAAAGTCCGGGATAGTTACCGTGAGAAATCATTTCAAGCTCTACCTAAAAAGCTC
TAGAGACATCATCGAGCTTTTATCTCTTATGGGGGCTTTCCGTGTTGTCGCTGTTTTACAGAAAGCTGTGGAGGTTCGCC
AGATACGAAGTGATGTTAGCAGGACACTGAACTTTCTTACTGCAAACGCGAATAAATCCGGTCAGGCGATGGCCAGGCAG
GTAAAAGCTATTCGGCTTATAGAAGAAAAGATTGGATTGGATAGATTGCCCGAAGACCTGAGAAAAATTGCAGAACTCAG
GTTAGAGTATGAGGATTTGAGTTTGCGCGAACTTGGCGAACTTATGGATCCTCCCATGAGTAAGTCGGCTGTTTATAATA
GGTTCAAAAAGATAATCAAAATCGCGGAGTCGCTGGGGGGATTAGATGAAATGCCCGTTTTGTAA

Upstream 100 bases:

>100_bases
GATTGATTGTTGATAACAGACGCAAGAAGGTTCTAAGGCACTCGCAGAAGGATATCTTGTTTATAGCGAGGGATTTAAAA
CTTGTGGAGGAATGTCAAGA

Downstream 100 bases:

>100_bases
CAGCGAAGAAACGAGAGTAATCGATACACGACTCACAGATGACGGTCATGTTGTTCGTAGACGAAGAGAGTGTGAGCATT
GTGGAGGACGATTCACAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSFSENVKEELYHLPLEDSAEAKAEFFGFVKSRGALRIRSNNTFLVIPLGSISSLKRLYLLSKFLDLSLFETQVKETLRF
KHVRGGEIIYRFSDVEKLLKMAKISITGDSLPPLVKKDPVYFGAFVRGLFLAGGSIVDPSKGYHLEVILDTTREFVERLK
AHLWSAFNIKSGIVTVRNHFKLYLKSSRDIIELLSLMGAFRVVAVLQKAVEVRQIRSDVSRTLNFLTANANKSGQAMARQ
VKAIRLIEEKIGLDRLPEDLRKIAELRLEYEDLSLRELGELMDPPMSKSAVYNRFKKIIKIAESLGGLDEMPVL

Sequences:

>Translated_314_residues
MSFSENVKEELYHLPLEDSAEAKAEFFGFVKSRGALRIRSNNTFLVIPLGSISSLKRLYLLSKFLDLSLFETQVKETLRF
KHVRGGEIIYRFSDVEKLLKMAKISITGDSLPPLVKKDPVYFGAFVRGLFLAGGSIVDPSKGYHLEVILDTTREFVERLK
AHLWSAFNIKSGIVTVRNHFKLYLKSSRDIIELLSLMGAFRVVAVLQKAVEVRQIRSDVSRTLNFLTANANKSGQAMARQ
VKAIRLIEEKIGLDRLPEDLRKIAELRLEYEDLSLRELGELMDPPMSKSAVYNRFKKIIKIAESLGGLDEMPVL
>Mature_313_residues
SFSENVKEELYHLPLEDSAEAKAEFFGFVKSRGALRIRSNNTFLVIPLGSISSLKRLYLLSKFLDLSLFETQVKETLRFK
HVRGGEIIYRFSDVEKLLKMAKISITGDSLPPLVKKDPVYFGAFVRGLFLAGGSIVDPSKGYHLEVILDTTREFVERLKA
HLWSAFNIKSGIVTVRNHFKLYLKSSRDIIELLSLMGAFRVVAVLQKAVEVRQIRSDVSRTLNFLTANANKSGQAMARQV
KAIRLIEEKIGLDRLPEDLRKIAELRLEYEDLSLRELGELMDPPMSKSAVYNRFKKIIKIAESLGGLDEMPVL

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004042
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 35624; Mature: 35493

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSENVKEELYHLPLEDSAEAKAEFFGFVKSRGALRIRSNNTFLVIPLGSISSLKRLYL
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCHHHHHHHHH
LSKFLDLSLFETQVKETLRFKHVRGGEIIYRFSDVEKLLKMAKISITGDSLPPLVKKDPV
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHEECCCCCCCCCCCCCH
YFGAFVRGLFLAGGSIVDPSKGYHLEVILDTTREFVERLKAHLWSAFNIKSGIVTVRNHF
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
KLYLKSSRDIIELLSLMGAFRVVAVLQKAVEVRQIRSDVSRTLNFLTANANKSGQAMARQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VKAIRLIEEKIGLDRLPEDLRKIAELRLEYEDLSLRELGELMDPPMSKSAVYNRFKKIIK
HHHHHHHHHHHCHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
IAESLGGLDEMPVL
HHHHHCCCCCCCCC
>Mature Secondary Structure 
SFSENVKEELYHLPLEDSAEAKAEFFGFVKSRGALRIRSNNTFLVIPLGSISSLKRLYL
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCHHHHHHHHH
LSKFLDLSLFETQVKETLRFKHVRGGEIIYRFSDVEKLLKMAKISITGDSLPPLVKKDPV
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHEECCCCCCCCCCCCCH
YFGAFVRGLFLAGGSIVDPSKGYHLEVILDTTREFVERLKAHLWSAFNIKSGIVTVRNHF
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
KLYLKSSRDIIELLSLMGAFRVVAVLQKAVEVRQIRSDVSRTLNFLTANANKSGQAMARQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VKAIRLIEEKIGLDRLPEDLRKIAELRLEYEDLSLRELGELMDPPMSKSAVYNRFKKIIK
HHHHHHHHHHHCHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
IAESLGGLDEMPVL
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA