| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239618288
Identifier: 239618288
GI number: 239618288
Start: 2046326
End: 2046937
Strand: Reverse
Name: 239618288
Synonym: Kole_1925
Alternate gene names: NA
Gene position: 2046937-2046326 (Counterclockwise)
Preceding gene: 239618290
Following gene: 239618287
Centisome position: 88.92
GC content: 40.85
Gene sequence:
>612_bases ATGTTTGTGAAGAAATGGATAAATCGTGCATACCCAACCTTTAACAAGAAGGATACTGTCGGTAAAGTTCTTGAAGAATG CGAAACTTACGAGGTTGCCGTCGTTGTTGCTCACGATGACGAAGGAAAACTCGCGGGAATGACCAGGGCCAGTAAACTAA TGAATGAAGACCCTGGAAAACCAATAAAGGAACTTCTTGAAGAACCAGCTTATTACTGTTACGCTGAAGACTACATCGAA GATGCTATCTTGCTGCTAATTGAGAGCCACGATTTCGTGATTCCAGTTGTTTCACATGATATGAAACTGAAGGGGGTCCT CACTGTTTTCGATATTCTTGAAGCCTTAATGGAGTTCACTGCAATGGATCAAAAAGGATCAAGAATCTCCCTCCTCCTTG ACGACAAACCAGGGGTTTTGAAAAAAGTTGTTGATGTTCTGGCTGAAAAAGAGATCAACATCTTGTCCATAGTTACCTCT CCAGAAGGCGAATCTAAGAAAAGAGTCATAATTCGAACCGATGAAACAAATTTGAAAGAGATAGTTGAAGTTCTTCAAAG CAACAATATAAGCTTCGAAACGGTAACAGAAGAGGAGGGATTCTGTGCTTGA
Upstream 100 bases:
>100_bases CTGATACATGTTTTTAACCCTTCCTTCCGTTTTTTCCTTGAACCCCGCTACTGGATTATTGTATCATATCAAAGAAATAT AAAGGAAAAGAGGCGAGAAT
Downstream 100 bases:
>100_bases GTTATGGAAATATACATTCCTCGGTATCGTTCAAGGGCTCACCGAGTTTTTGCCCGTTTCTTCTTCTGGTCATCTTACAG TCATTTCAAAACTGATGAAT
Product: CBS domain containing protein
Products: NA
Alternate protein names: CBS Domain Containing Membrane Protein; Signal-Transduction Protein; CBS Domain Containing Protein; Acetoin Utilization Protein AcuB; CBS Domain Pair Protein
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MFVKKWINRAYPTFNKKDTVGKVLEECETYEVAVVVAHDDEGKLAGMTRASKLMNEDPGKPIKELLEEPAYYCYAEDYIE DAILLLIESHDFVIPVVSHDMKLKGVLTVFDILEALMEFTAMDQKGSRISLLLDDKPGVLKKVVDVLAEKEINILSIVTS PEGESKKRVIIRTDETNLKEIVEVLQSNNISFETVTEEEGFCA
Sequences:
>Translated_203_residues MFVKKWINRAYPTFNKKDTVGKVLEECETYEVAVVVAHDDEGKLAGMTRASKLMNEDPGKPIKELLEEPAYYCYAEDYIE DAILLLIESHDFVIPVVSHDMKLKGVLTVFDILEALMEFTAMDQKGSRISLLLDDKPGVLKKVVDVLAEKEINILSIVTS PEGESKKRVIIRTDETNLKEIVEVLQSNNISFETVTEEEGFCA >Mature_203_residues MFVKKWINRAYPTFNKKDTVGKVLEECETYEVAVVVAHDDEGKLAGMTRASKLMNEDPGKPIKELLEEPAYYCYAEDYIE DAILLLIESHDFVIPVVSHDMKLKGVLTVFDILEALMEFTAMDQKGSRISLLLDDKPGVLKKVVDVLAEKEINILSIVTS PEGESKKRVIIRTDETNLKEIVEVLQSNNISFETVTEEEGFCA
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22904; Mature: 22904
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVKKWINRAYPTFNKKDTVGKVLEECETYEVAVVVAHDDEGKLAGMTRASKLMNEDPGK CCHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCH PIKELLEEPAYYCYAEDYIEDAILLLIESHDFVIPVVSHDMKLKGVLTVFDILEALMEFT HHHHHHHCCCEEEEHHHHHHHHHEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH AMDQKGSRISLLLDDKPGVLKKVVDVLAEKEINILSIVTSPEGESKKRVIIRTDETNLKE HCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCHHH IVEVLQSNNISFETVTEEEGFCA HHHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure MFVKKWINRAYPTFNKKDTVGKVLEECETYEVAVVVAHDDEGKLAGMTRASKLMNEDPGK CCHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCH PIKELLEEPAYYCYAEDYIEDAILLLIESHDFVIPVVSHDMKLKGVLTVFDILEALMEFT HHHHHHHCCCEEEEHHHHHHHHHEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH AMDQKGSRISLLLDDKPGVLKKVVDVLAEKEINILSIVTSPEGESKKRVIIRTDETNLKE HCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCHHH IVEVLQSNNISFETVTEEEGFCA HHHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA