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The map label for this gene is gatC [H]

Identifier: 239618283

GI number: 239618283

Start: 2042192

End: 2042482

Strand: Reverse

Name: gatC [H]

Synonym: Kole_1920

Alternate gene names: 239618283

Gene position: 2042482-2042192 (Counterclockwise)

Preceding gene: 239618284

Following gene: 239618282

Centisome position: 88.72

GC content: 37.46

Gene sequence:

>291_bases
ATGAAGATCAAAGTTGATAAAAAACTGATTTCTCACCTGGAAAATCTTGCAAAACTTGAACTAACGGATGAGGAACGAAA
AAAACTCATGGAAGAACTGGAAAAGATCCTAAACTATATGTCGACTCTCGATGAAGTGAATGTTGATGATATCGAAGAAA
TGGTATCTCCTATAGAAAACTCAATGACTCCTCGGGAAGATAGAGCAAGAAAATTCGAACACATTGATTCCCTGATCGAG
CTCTTCCCGAAAAAAGAAGGGCGATACCTTAAGGTACCCAAAATCTACTAA

Upstream 100 bases:

>100_bases
TTGCCGGATTCGAATGGGGTTCCGGATTCTATATAAATCCCGTTCCGCCAGAACACGCGGCAAAATACCTTCGAGAAGTC
TCCATCGAGGAGGAATAGAA

Downstream 100 bases:

>100_bases
TGGACGACATGTCTCTTAAAAAAGGAAAAGAATTTGAGGAAAGAGCAAGCAAGTTTCTCAAAAAGCAGGGTTACAAAATA
CTCGCAAGAAATGTTCGCTA

Product: glutamyl-tRNA(Gln) amidotransferase, C subunit

Products: NA

Alternate protein names: Glu-ADT subunit C [H]

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MKIKVDKKLISHLENLAKLELTDEERKKLMEELEKILNYMSTLDEVNVDDIEEMVSPIENSMTPREDRARKFEHIDSLIE
LFPKKEGRYLKVPKIY

Sequences:

>Translated_96_residues
MKIKVDKKLISHLENLAKLELTDEERKKLMEELEKILNYMSTLDEVNVDDIEEMVSPIENSMTPREDRARKFEHIDSLIE
LFPKKEGRYLKVPKIY
>Mature_96_residues
MKIKVDKKLISHLENLAKLELTDEERKKLMEELEKILNYMSTLDEVNVDDIEEMVSPIENSMTPREDRARKFEHIDSLIE
LFPKKEGRYLKVPKIY

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 11464; Mature: 11464

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKVDKKLISHLENLAKLELTDEERKKLMEELEKILNYMSTLDEVNVDDIEEMVSPIEN
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SMTPREDRARKFEHIDSLIELFPKKEGRYLKVPKIY
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC
>Mature Secondary Structure
MKIKVDKKLISHLENLAKLELTDEERKKLMEELEKILNYMSTLDEVNVDDIEEMVSPIEN
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SMTPREDRARKFEHIDSLIELFPKKEGRYLKVPKIY
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]