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The map label for this gene is yraN [C]

Identifier: 239618282

GI number: 239618282

Start: 2041845

End: 2042192

Strand: Reverse

Name: yraN [C]

Synonym: Kole_1919

Alternate gene names: 239618282

Gene position: 2042192-2041845 (Counterclockwise)

Preceding gene: 239618283

Following gene: 239618281

Centisome position: 88.71

GC content: 41.67

Gene sequence:

>348_bases
ATGGACGACATGTCTCTTAAAAAAGGAAAAGAATTTGAGGAAAGAGCAAGCAAGTTTCTCAAAAAGCAGGGTTACAAAAT
ACTCGCAAGAAATGTTCGCTATTCTTTTGGAGAGCTGGACATAGTCGCAAGGAAAGGAAAGACACTAGTATTTGTGGAAG
TTAAGGGCGGCAATCCGGATTTTCCACCACGAATGAGGGTTGACCGCGCAAAGTTAAGGCGTCTGGAACTTGCAGCTTAC
AAATACATAAAAGACTTTTCACCAAAATTCGAAGAATCCCGTCTTGACGTGATAGAGGTTTTATCCAACGGCGAGATAAA
TCATCTAAAAGGTGTTGGAAGGTGGTAG

Upstream 100 bases:

>100_bases
CTCGGGAAGATAGAGCAAGAAAATTCGAACACATTGATTCCCTGATCGAGCTCTTCCCGAAAAAAGAAGGGCGATACCTT
AAGGTACCCAAAATCTACTA

Downstream 100 bases:

>100_bases
TAATATGATACGAACAGAAAAGGAAATACTTCAGGAATACCAGCGTTGGCTAGAAAATGCTTCGGCTGAACTTGTTCAGG
AATTAAAGAGCCTTCCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MDDMSLKKGKEFEERASKFLKKQGYKILARNVRYSFGELDIVARKGKTLVFVEVKGGNPDFPPRMRVDRAKLRRLELAAY
KYIKDFSPKFEESRLDVIEVLSNGEINHLKGVGRW

Sequences:

>Translated_115_residues
MDDMSLKKGKEFEERASKFLKKQGYKILARNVRYSFGELDIVARKGKTLVFVEVKGGNPDFPPRMRVDRAKLRRLELAAY
KYIKDFSPKFEESRLDVIEVLSNGEINHLKGVGRW
>Mature_115_residues
MDDMSLKKGKEFEERASKFLKKQGYKILARNVRYSFGELDIVARKGKTLVFVEVKGGNPDFPPRMRVDRAKLRRLELAAY
KYIKDFSPKFEESRLDVIEVLSNGEINHLKGVGRW

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1919_KOSOT (C5CGT1)

Other databases:

- EMBL:   CP001634
- RefSeq:   YP_002941604.1
- ProteinModelPortal:   C5CGT1
- GeneID:   7968410
- GenomeReviews:   CP001634_GR
- KEGG:   kol:Kole_1919
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13395; Mature: 13395

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDMSLKKGKEFEERASKFLKKQGYKILARNVRYSFGELDIVARKGKTLVFVEVKGGNPD
CCCCCCCCCCCHHHHHHHHHHHCCHHEEHHHCCCCCCCEEEEEECCCEEEEEEECCCCCC
FPPRMRVDRAKLRRLELAAYKYIKDFSPKFEESRLDVIEVLSNGEINHLKGVGRW
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDDMSLKKGKEFEERASKFLKKQGYKILARNVRYSFGELDIVARKGKTLVFVEVKGGNPD
CCCCCCCCCCCHHHHHHHHHHHCCHHEEHHHCCCCCCCEEEEEECCCEEEEEEECCCCCC
FPPRMRVDRAKLRRLELAAYKYIKDFSPKFEESRLDVIEVLSNGEINHLKGVGRW
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA