| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is secA [H]
Identifier: 239618276
GI number: 239618276
Start: 2034105
End: 2036567
Strand: Reverse
Name: secA [H]
Synonym: Kole_1913
Alternate gene names: 239618276
Gene position: 2036567-2034105 (Counterclockwise)
Preceding gene: 239618277
Following gene: 239618275
Centisome position: 88.46
GC content: 40.93
Gene sequence:
>2463_bases ATGAAAATTTTAGGAAAGCTTTTCGACAAGAACAAAAGAACTTTGAAAAGATACGATTCCATTGTAAAAAAAGTGAATGC TCTGGAAAAAGAAGTCAGGGAATACCCGGCAGAAAAATTTCCTCAGAAGACCCGTGAATTAAAAGAGAGGATAAAAAAGG GAGAACCATTGGATAATCTTTTGCCTGAAGCTTTTGCTCTTGTTCGTGAAAGTGCCAGAAGAACGGTTGGTATGAGGCAT TTTGACGTCCAGGTAATGGGCGCCATAGCTCTCCACGAGGGAAAGATAGCCGAAATGAAAACCGGAGAAGGAAAAACCCT GGTAGCAACCATGCCCCTCTATCTGAACGCCTTGACCGGGAAAAACGTTCAACTCGCCACAGTCAACGACTACCTGGCAA GAAGAGATGCGGCGTGGATGGGACCAGTCTATGAATATCTAGGATTAACCGTTGGATACATACAATCATCCATGGATACA TCAGATCGAAAAAAAGCCTATCAATCCGATGTAACTTACGGTACTGCCAACGAATTTGGATTCGATTATTTGCGCGATAA TCTTGTCTACTCATTAGAACAAAAAGTGCAAAGAGACCACTACTACGTTATCGTTGACGAAGCTGATAGCATCTTGATAG ACGAAGCCAGAACACCTCTGATCATTTCGGGACCAGCAGAGGCATCTTCAGAACTATACAGAAAATCCGCCTTCTATGCC AGACGCTTTGTGGAAAATGAAGATTTTATCGTAAATGAAAAAGAAAAAACGGTCAGTCTTACCGATAAAGGAATAGAAAA AGCCGAGAGACTCTTCGGGATTGATAATCTCTACGACCCAAATAATTATACTTACCTTTTCCATCTTTTGAATGCCTTAA AAGCCCGAACTCTTTTTAAAAAAGATGTGGATTACATCGTATCCAACGGGGAAGTCATTATCGTCGACGAATTCACCGGA AGACTTCTTCCAGGAAGACGTTACAGTGAAGGATTGCACCAAGCCATCGAAGCAAAAGAAAATGTCAAGATAAAAGAAGA AAGCATTACTTATGCCACTATCACCTTCCAGAACTACTTCAAGATGTATGAAAAACTCGCGGGGATGACAGGAACGGCTG CTACCGAAGAAGCCGAATTCGTATCAATATACGGTTGTGAGGTAGTGGTTATACCGACAAACAAACCAGTTCTCAGAAAA GACAAAGATGATCTCGTCTTCCGTACTGTAGAAGAAAAATACGCTGCTATTGTTGAGGAAATAGAAAAACGCTATAAGAA AGGCCAACCTGTTCTTGTTGGAACAACTTCTATAGAAAAGAGTGAATATCTGAGCTCTTTGCTTAGAAAAAAAGGCATTC CACATGAAGTCTTAAATGCCAAGCACCACGAAAGAGAAGCAGAAATAGTAGCCAAAGCTGGTGAAAAAGGTACTGTAACC ATCGCTACGAATATGGCCGGTAGAGGAACCGATATAAAGCTTGGTGAGGGTGTCAAAGAACTTGGCGGATTATTCGTTCT TGGAACGGAGCGTCATGAAAGTCGAAGAATAGACAACCAGCTCATCGGTCGTTCCGGAAGGCAAGGGGATCCCGGAGAAT CGAGGTTCTTCCTATCCCTCGAAGATGACTTGATTCGTCTTTTTGGCGGAGAAAAGCTCAAAGGTATTATGGACACCCTC AAAATAGAAAAAGGTGAACCAATCGAACATCCATTGCTGAGTAGAATAATCAACTCCGCTCAGAAAAAAATCGAAGGTAT TCATTTCTCAATACGAAAACGCCTTTACGAGCTAGACTCTGTTGTAGATAAACAAAGGAGTGCTATTTACGCCCACAGGG ATTGGCTCCTTAGAGGTGAAGACATCGATAAACATATCCATGAAATCATAGAGGATACGGTTACTCGCAGAACAGAAAAT TGGGAAACTGTTCCCGCATATGAAGAGATAAAAACTTCCTTCGGCTTTCTACCTGAACGAATCCTGGAAGGTGTTAAAAG CTGCAAAAAACCTGAAGAGTTAACCAATATACTCATAGAAAACCTGAAAAAAGAGTATGAAGAAAAGAAAAAAGCCTTTG GCGATGAGTTCCCCAATGTGCTGAAATATTTAATGCTTCGCATGATAGATGAACGCTGGAGAAAACACCTGGAAGCAATA GAACATTTGAAGGACTCGGTGGGTTTAAGGGCTTACGGACAAAAGGATCCTGTGATAGAATTCAAAAAAGAATCCTATAT ATTGTTTGAAGAAATGGTCGATTCGTTGTACGATGACATTGTCAGCGTACTGGTAAGATTGATCAGAATAGATAGCGAAA AAACAAGAGAGAAAGCGCAGAAAGAGCTACAAAAGTTGAATTTCGTTCATAATGAATTTTCTGCCCTCAAAAAAGATGGC GGTAAACGTTCTAAAGAGAAAAAGCACGGTACTCATAGCAGAAGATTCAAAGTAAAACGTTGA
Upstream 100 bases:
>100_bases ACATTCTCGGTCTAAATGTTGATTCAGCTATACTCTATCAGGAAACTGTGGATTCTTCTGGAACATTCATACACACGCTG AGAATATATTGAGGTGAATT
Downstream 100 bases:
>100_bases AGGATGGTGGGAACCAACAATGTTAAGTTATGAAACAAACGCCAGAATCCAGGAACTGAGAGACAAATTTGAAAATATAA AAACAACCGTTGACGTGGAT
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 820; Mature: 820
Protein sequence:
>820_residues MKILGKLFDKNKRTLKRYDSIVKKVNALEKEVREYPAEKFPQKTRELKERIKKGEPLDNLLPEAFALVRESARRTVGMRH FDVQVMGAIALHEGKIAEMKTGEGKTLVATMPLYLNALTGKNVQLATVNDYLARRDAAWMGPVYEYLGLTVGYIQSSMDT SDRKKAYQSDVTYGTANEFGFDYLRDNLVYSLEQKVQRDHYYVIVDEADSILIDEARTPLIISGPAEASSELYRKSAFYA RRFVENEDFIVNEKEKTVSLTDKGIEKAERLFGIDNLYDPNNYTYLFHLLNALKARTLFKKDVDYIVSNGEVIIVDEFTG RLLPGRRYSEGLHQAIEAKENVKIKEESITYATITFQNYFKMYEKLAGMTGTAATEEAEFVSIYGCEVVVIPTNKPVLRK DKDDLVFRTVEEKYAAIVEEIEKRYKKGQPVLVGTTSIEKSEYLSSLLRKKGIPHEVLNAKHHEREAEIVAKAGEKGTVT IATNMAGRGTDIKLGEGVKELGGLFVLGTERHESRRIDNQLIGRSGRQGDPGESRFFLSLEDDLIRLFGGEKLKGIMDTL KIEKGEPIEHPLLSRIINSAQKKIEGIHFSIRKRLYELDSVVDKQRSAIYAHRDWLLRGEDIDKHIHEIIEDTVTRRTEN WETVPAYEEIKTSFGFLPERILEGVKSCKKPEELTNILIENLKKEYEEKKKAFGDEFPNVLKYLMLRMIDERWRKHLEAI EHLKDSVGLRAYGQKDPVIEFKKESYILFEEMVDSLYDDIVSVLVRLIRIDSEKTREKAQKELQKLNFVHNEFSALKKDG GKRSKEKKHGTHSRRFKVKR
Sequences:
>Translated_820_residues MKILGKLFDKNKRTLKRYDSIVKKVNALEKEVREYPAEKFPQKTRELKERIKKGEPLDNLLPEAFALVRESARRTVGMRH FDVQVMGAIALHEGKIAEMKTGEGKTLVATMPLYLNALTGKNVQLATVNDYLARRDAAWMGPVYEYLGLTVGYIQSSMDT SDRKKAYQSDVTYGTANEFGFDYLRDNLVYSLEQKVQRDHYYVIVDEADSILIDEARTPLIISGPAEASSELYRKSAFYA RRFVENEDFIVNEKEKTVSLTDKGIEKAERLFGIDNLYDPNNYTYLFHLLNALKARTLFKKDVDYIVSNGEVIIVDEFTG RLLPGRRYSEGLHQAIEAKENVKIKEESITYATITFQNYFKMYEKLAGMTGTAATEEAEFVSIYGCEVVVIPTNKPVLRK DKDDLVFRTVEEKYAAIVEEIEKRYKKGQPVLVGTTSIEKSEYLSSLLRKKGIPHEVLNAKHHEREAEIVAKAGEKGTVT IATNMAGRGTDIKLGEGVKELGGLFVLGTERHESRRIDNQLIGRSGRQGDPGESRFFLSLEDDLIRLFGGEKLKGIMDTL KIEKGEPIEHPLLSRIINSAQKKIEGIHFSIRKRLYELDSVVDKQRSAIYAHRDWLLRGEDIDKHIHEIIEDTVTRRTEN WETVPAYEEIKTSFGFLPERILEGVKSCKKPEELTNILIENLKKEYEEKKKAFGDEFPNVLKYLMLRMIDERWRKHLEAI EHLKDSVGLRAYGQKDPVIEFKKESYILFEEMVDSLYDDIVSVLVRLIRIDSEKTREKAQKELQKLNFVHNEFSALKKDG GKRSKEKKHGTHSRRFKVKR >Mature_820_residues MKILGKLFDKNKRTLKRYDSIVKKVNALEKEVREYPAEKFPQKTRELKERIKKGEPLDNLLPEAFALVRESARRTVGMRH FDVQVMGAIALHEGKIAEMKTGEGKTLVATMPLYLNALTGKNVQLATVNDYLARRDAAWMGPVYEYLGLTVGYIQSSMDT SDRKKAYQSDVTYGTANEFGFDYLRDNLVYSLEQKVQRDHYYVIVDEADSILIDEARTPLIISGPAEASSELYRKSAFYA RRFVENEDFIVNEKEKTVSLTDKGIEKAERLFGIDNLYDPNNYTYLFHLLNALKARTLFKKDVDYIVSNGEVIIVDEFTG RLLPGRRYSEGLHQAIEAKENVKIKEESITYATITFQNYFKMYEKLAGMTGTAATEEAEFVSIYGCEVVVIPTNKPVLRK DKDDLVFRTVEEKYAAIVEEIEKRYKKGQPVLVGTTSIEKSEYLSSLLRKKGIPHEVLNAKHHEREAEIVAKAGEKGTVT IATNMAGRGTDIKLGEGVKELGGLFVLGTERHESRRIDNQLIGRSGRQGDPGESRFFLSLEDDLIRLFGGEKLKGIMDTL KIEKGEPIEHPLLSRIINSAQKKIEGIHFSIRKRLYELDSVVDKQRSAIYAHRDWLLRGEDIDKHIHEIIEDTVTRRTEN WETVPAYEEIKTSFGFLPERILEGVKSCKKPEELTNILIENLKKEYEEKKKAFGDEFPNVLKYLMLRMIDERWRKHLEAI EHLKDSVGLRAYGQKDPVIEFKKESYILFEEMVDSLYDDIVSVLVRLIRIDSEKTREKAQKELQKLNFVHNEFSALKKDG GKRSKEKKHGTHSRRFKVKR
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=849, Percent_Identity=48.4098939929329, Blast_Score=750, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001650 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF00271 Helicase_C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 94360; Mature: 94360
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILGKLFDKNKRTLKRYDSIVKKVNALEKEVREYPAEKFPQKTRELKERIKKGEPLDNL CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHCCCCHHHH LPEAFALVRESARRTVGMRHFDVQVMGAIALHEGKIAEMKTGEGKTLVATMPLYLNALTG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHCC KNVQLATVNDYLARRDAAWMGPVYEYLGLTVGYIQSSMDTSDRKKAYQSDVTYGTANEFG CCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCC FDYLRDNLVYSLEQKVQRDHYYVIVDEADSILIDEARTPLIISGPAEASSELYRKSAFYA HHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHH RRFVENEDFIVNEKEKTVSLTDKGIEKAERLFGIDNLYDPNNYTYLFHLLNALKARTLFK HHHCCCCCCEECCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH KDVDYIVSNGEVIIVDEFTGRLLPGRRYSEGLHQAIEAKENVKIKEESITYATITFQNYF HHHHHEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCEEEEEEEHHHHH KMYEKLAGMTGTAATEEAEFVSIYGCEVVVIPTNKPVLRKDKDDLVFRTVEEKYAAIVEE HHHHHHCCCCCCCCCCCCCEEEEECEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH IEKRYKKGQPVLVGTTSIEKSEYLSSLLRKKGIPHEVLNAKHHEREAEIVAKAGEKGTVT HHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCEEE IATNMAGRGTDIKLGEGVKELGGLFVLGTERHESRRIDNQLIGRSGRQGDPGESRFFLSL EEECCCCCCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE EDDLIRLFGGEKLKGIMDTLKIEKGEPIEHPLLSRIINSAQKKIEGIHFSIRKRLYELDS HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVDKQRSAIYAHRDWLLRGEDIDKHIHEIIEDTVTRRTENWETVPAYEEIKTSFGFLPER HHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH ILEGVKSCKKPEELTNILIENLKKEYEEKKKAFGDEFPNVLKYLMLRMIDERWRKHLEAI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EHLKDSVGLRAYGQKDPVIEFKKESYILFEEMVDSLYDDIVSVLVRLIRIDSEKTREKAQ HHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KELQKLNFVHNEFSALKKDGGKRSKEKKHGTHSRRFKVKR HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEECCC >Mature Secondary Structure MKILGKLFDKNKRTLKRYDSIVKKVNALEKEVREYPAEKFPQKTRELKERIKKGEPLDNL CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHCCCCHHHH LPEAFALVRESARRTVGMRHFDVQVMGAIALHEGKIAEMKTGEGKTLVATMPLYLNALTG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHCC KNVQLATVNDYLARRDAAWMGPVYEYLGLTVGYIQSSMDTSDRKKAYQSDVTYGTANEFG CCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCC FDYLRDNLVYSLEQKVQRDHYYVIVDEADSILIDEARTPLIISGPAEASSELYRKSAFYA HHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHH RRFVENEDFIVNEKEKTVSLTDKGIEKAERLFGIDNLYDPNNYTYLFHLLNALKARTLFK HHHCCCCCCEECCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH KDVDYIVSNGEVIIVDEFTGRLLPGRRYSEGLHQAIEAKENVKIKEESITYATITFQNYF HHHHHEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCEEEEEEEHHHHH KMYEKLAGMTGTAATEEAEFVSIYGCEVVVIPTNKPVLRKDKDDLVFRTVEEKYAAIVEE HHHHHHCCCCCCCCCCCCCEEEEECEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH IEKRYKKGQPVLVGTTSIEKSEYLSSLLRKKGIPHEVLNAKHHEREAEIVAKAGEKGTVT HHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCEEE IATNMAGRGTDIKLGEGVKELGGLFVLGTERHESRRIDNQLIGRSGRQGDPGESRFFLSL EEECCCCCCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE EDDLIRLFGGEKLKGIMDTLKIEKGEPIEHPLLSRIINSAQKKIEGIHFSIRKRLYELDS HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVDKQRSAIYAHRDWLLRGEDIDKHIHEIIEDTVTRRTENWETVPAYEEIKTSFGFLPER HHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH ILEGVKSCKKPEELTNILIENLKKEYEEKKKAFGDEFPNVLKYLMLRMIDERWRKHLEAI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EHLKDSVGLRAYGQKDPVIEFKKESYILFEEMVDSLYDDIVSVLVRLIRIDSEKTREKAQ HHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KELQKLNFVHNEFSALKKDGGKRSKEKKHGTHSRRFKVKR HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA