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The map label for this gene is yebR [H]

Identifier: 239617955

GI number: 239617955

Start: 1696891

End: 1697847

Strand: Direct

Name: yebR [H]

Synonym: Kole_1583

Alternate gene names: 239617955

Gene position: 1696891-1697847 (Clockwise)

Preceding gene: 239617954

Following gene: 239617956

Centisome position: 73.71

GC content: 41.17

Gene sequence:

>957_bases
ATGAGAAGCATATTCAGGGATTTTTCAGAGGAGTTTTTTCAAATACTTACATATCCTAAGGAGGATTGGTTTGAGTTCTG
GAAAGAGTACAAGAAGAATCATCCAAGGATTTTTGAAGAATACCTCATAAAACATTCCTTGACCGAAGAAGAGGAAAAGA
AACGCCTCAAAAGCCTTGAACGGCGTTCCCTCGATATGCTGCGTCAAAACTGGCAGCAGTGCCAGCAAAAAGTCAAACAA
CACGTTATCAAAAGCATAGATGAATTGTCCGACAAACTGGAGCTTTCCAGAGAAGATTTTGTTGTTTTTGTTATGGGAGC
TCTCGGTTACGAGCGCAGGATGTTTGTTCCCACATCTGTAGGGCATGTGATAATGGTAGATCTTGTTGGAAACTTGCAAA
GGGGAAATCTCGAAAATCTCGGGGAGTTCATCATAGAAAGTATGCTCGAATTCAGAAGGTTTTCCGAATTAGAGGTAACG
CTTGAGATGCCAGTAGAAGAAAGAAAAAGGCGCTTTGAAAAGTTGTTCAACGTCATTTCCGAAAAGATTAGAGAAAAAGA
GTTTGATGAAAAGCTGAAAACCATTGTGAAACTTTTAGATCATTACGTTACTTATTACAACTGGACCGGGTTTTATCTTA
CCGATGAAGACGAAGCCACCCTGTTACTCGGTCCTTTTGTCGGGGAACCAACGGAACATGTGAGGATCAAGTTTGGTCAG
GGAATTTGCGGTCAGGCCGCTGAGAAAAAAGCCCTGTTCCTTGTCCCGGATGTTTCCAGAGAAGCAAATTATCTATCCTG
CAGTCCTAAAACGAAATCGGAAATCGTTGTTCCAATCTTGAAAGGGAACAAAGTCATTGGAGAATTGGACATAGACAGCC
ACAGTATTGGAGCATTTACTGATGCTGACAGCGAATTTCTTGAGAAGATCTGTAAGTTACTTGTAGACAATCAATGA

Upstream 100 bases:

>100_bases
GGGGGATAACGCTGCTGATTACGAGCCACGATTTATCAACTCTAGAAATATGCGACAGAGTACTTGAATTAAGAGAAGGA
AAACTCTGGGAGGTGCAACA

Downstream 100 bases:

>100_bases
TCGGTTTGGTGCTGCATTTCATGGAATAAATTTAGTGTGTGTTTGTAGTTTGTTGTAATCTTAATTTAACCTTGATTGCG
AAAATGAGAAATCAAATCTT

Product: GAF sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRSIFRDFSEEFFQILTYPKEDWFEFWKEYKKNHPRIFEEYLIKHSLTEEEEKKRLKSLERRSLDMLRQNWQQCQQKVKQ
HVIKSIDELSDKLELSREDFVVFVMGALGYERRMFVPTSVGHVIMVDLVGNLQRGNLENLGEFIIESMLEFRRFSELEVT
LEMPVEERKRRFEKLFNVISEKIREKEFDEKLKTIVKLLDHYVTYYNWTGFYLTDEDEATLLLGPFVGEPTEHVRIKFGQ
GICGQAAEKKALFLVPDVSREANYLSCSPKTKSEIVVPILKGNKVIGELDIDSHSIGAFTDADSEFLEKICKLLVDNQ

Sequences:

>Translated_318_residues
MRSIFRDFSEEFFQILTYPKEDWFEFWKEYKKNHPRIFEEYLIKHSLTEEEEKKRLKSLERRSLDMLRQNWQQCQQKVKQ
HVIKSIDELSDKLELSREDFVVFVMGALGYERRMFVPTSVGHVIMVDLVGNLQRGNLENLGEFIIESMLEFRRFSELEVT
LEMPVEERKRRFEKLFNVISEKIREKEFDEKLKTIVKLLDHYVTYYNWTGFYLTDEDEATLLLGPFVGEPTEHVRIKFGQ
GICGQAAEKKALFLVPDVSREANYLSCSPKTKSEIVVPILKGNKVIGELDIDSHSIGAFTDADSEFLEKICKLLVDNQ
>Mature_318_residues
MRSIFRDFSEEFFQILTYPKEDWFEFWKEYKKNHPRIFEEYLIKHSLTEEEEKKRLKSLERRSLDMLRQNWQQCQQKVKQ
HVIKSIDELSDKLELSREDFVVFVMGALGYERRMFVPTSVGHVIMVDLVGNLQRGNLENLGEFIIESMLEFRRFSELEVT
LEMPVEERKRRFEKLFNVISEKIREKEFDEKLKTIVKLLDHYVTYYNWTGFYLTDEDEATLLLGPFVGEPTEHVRIKFGQ
GICGQAAEKKALFLVPDVSREANYLSCSPKTKSEIVVPILKGNKVIGELDIDSHSIGAFTDADSEFLEKICKLLVDNQ

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=130, Percent_Identity=39.2307692307692, Blast_Score=92, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6322781, Length=110, Percent_Identity=46.3636363636364, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 37546; Mature: 37546

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIFRDFSEEFFQILTYPKEDWFEFWKEYKKNHPRIFEEYLIKHSLTEEEEKKRLKSLE
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RRSLDMLRQNWQQCQQKVKQHVIKSIDELSDKLELSREDFVVFVMGALGYERRMFVPTSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCEEECCCCC
GHVIMVDLVGNLQRGNLENLGEFIIESMLEFRRFSELEVTLEMPVEERKRRFEKLFNVIS
CCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHEEEEECCHHHHHHHHHHHHHHHH
EKIREKEFDEKLKTIVKLLDHYVTYYNWTGFYLTDEDEATLLLGPFVGEPTEHVRIKFGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECC
GICGQAAEKKALFLVPDVSREANYLSCSPKTKSEIVVPILKGNKVIGELDIDSHSIGAFT
CCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCC
DADSEFLEKICKLLVDNQ
CCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSIFRDFSEEFFQILTYPKEDWFEFWKEYKKNHPRIFEEYLIKHSLTEEEEKKRLKSLE
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RRSLDMLRQNWQQCQQKVKQHVIKSIDELSDKLELSREDFVVFVMGALGYERRMFVPTSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCEEECCCCC
GHVIMVDLVGNLQRGNLENLGEFIIESMLEFRRFSELEVTLEMPVEERKRRFEKLFNVIS
CCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHEEEEECCHHHHHHHHHHHHHHHH
EKIREKEFDEKLKTIVKLLDHYVTYYNWTGFYLTDEDEATLLLGPFVGEPTEHVRIKFGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECC
GICGQAAEKKALFLVPDVSREANYLSCSPKTKSEIVVPILKGNKVIGELDIDSHSIGAFT
CCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCC
DADSEFLEKICKLLVDNQ
CCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]