| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617903
Identifier: 239617903
GI number: 239617903
Start: 1642875
End: 1643810
Strand: Direct
Name: 239617903
Synonym: Kole_1531
Alternate gene names: NA
Gene position: 1642875-1643810 (Clockwise)
Preceding gene: 239617899
Following gene: 239617904
Centisome position: 71.36
GC content: 43.38
Gene sequence:
>936_bases ATGAAACAACTGATGGTGACGCTTCTGGTTATTGTGATGGTTGTTATAGGCTTTGGTAACTATCTCTATATAAACCCTAT TGGACCAACGCTCGTTCCAATAGCACGTTTGATACATGATTCTCCAGACGGAAAGACGATCGCTGAAGGCTTTTCCATTG AGTTCTGGAAAACCGTTGATCAGGCTTTAGCACTCGTGATAAGTGGAAAAGCCGATTTTGCTCTTCTTCCCGTCACTATC GGTGCAAAACTTGCTGCAGAGGGTGTTCCGATAAAACTCGCGGCAGTTTCCATGTGGGGCGGTTTTTATTTTGTTTCCCG TAATGAGCCTATTGAAGGTGTTGAAGATCTATTGGGAAAGGCTGTTTACACGCTTCATGCCCCCGGACAAACGGCGGATG TTATACTGCGTGGTGTACTTGAAAAACTGGGGTATGAGGTGAATAAGGACATTAGGATCGTTTATGTGGCGGGACCAGAA GCGTTGCAATTATTCGCTGCCGGAAAAGCCGATATACTTTTGCTTCCTGAACCTTTCGCTTCTTTAGCCCAGGCCAAGGT GAAGGGGTCTATTAAATCCATGAGTATCGATGAATTGTGGAGAATTCTGAGCCCTGGAAATGGTCCGATACCGAGTTCCG GGATCTTTGTTAGAAAAGATGTGGACCCAACCGTTGTTGATCTATTCCTTCTTCTTTATAAACAATCTTTGACCCTTTCT CTTCAGGATCTGGAGCTCACCGCGTCGATTGTTTCCGAAGCGATGGGTGGATTTCCCGTTCCAATATTGAAGAAGTCCTT TTCAGGAATAGACTACGAATTCAAAGCAGCTTCTGAAATAAAAGATGAAGTGGTTTCCTATCTGGAAACGTTAAGAGAAC TTGATGAATCTTTAGTTGGTGATTTAAATTTTGACGAGTTTTTCTATGAGAAATAG
Upstream 100 bases:
>100_bases AGAGCTTATCCTCCGGCTGCTTTTCCCGGGATAATCCGCAGCTAACACGGTGTGATGGTTTTCCTTTCTGGTGTATAATT TATTTGAAGGAGGTGGTACG
Downstream 100 bases:
>100_bases TCAACTTGGCCTGTTTGCAGCTATATTGATAATTCTTGGGATCTGGGAGCTTGCATACCTCGCGGTAGGCAATTCCCTTT TGCTTCCAGGACCAATTACA
Product: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MKQLMVTLLVIVMVVIGFGNYLYINPIGPTLVPIARLIHDSPDGKTIAEGFSIEFWKTVDQALALVISGKADFALLPVTI GAKLAAEGVPIKLAAVSMWGGFYFVSRNEPIEGVEDLLGKAVYTLHAPGQTADVILRGVLEKLGYEVNKDIRIVYVAGPE ALQLFAAGKADILLLPEPFASLAQAKVKGSIKSMSIDELWRILSPGNGPIPSSGIFVRKDVDPTVVDLFLLLYKQSLTLS LQDLELTASIVSEAMGGFPVPILKKSFSGIDYEFKAASEIKDEVVSYLETLRELDESLVGDLNFDEFFYEK
Sequences:
>Translated_311_residues MKQLMVTLLVIVMVVIGFGNYLYINPIGPTLVPIARLIHDSPDGKTIAEGFSIEFWKTVDQALALVISGKADFALLPVTI GAKLAAEGVPIKLAAVSMWGGFYFVSRNEPIEGVEDLLGKAVYTLHAPGQTADVILRGVLEKLGYEVNKDIRIVYVAGPE ALQLFAAGKADILLLPEPFASLAQAKVKGSIKSMSIDELWRILSPGNGPIPSSGIFVRKDVDPTVVDLFLLLYKQSLTLS LQDLELTASIVSEAMGGFPVPILKKSFSGIDYEFKAASEIKDEVVSYLETLRELDESLVGDLNFDEFFYEK >Mature_311_residues MKQLMVTLLVIVMVVIGFGNYLYINPIGPTLVPIARLIHDSPDGKTIAEGFSIEFWKTVDQALALVISGKADFALLPVTI GAKLAAEGVPIKLAAVSMWGGFYFVSRNEPIEGVEDLLGKAVYTLHAPGQTADVILRGVLEKLGYEVNKDIRIVYVAGPE ALQLFAAGKADILLLPEPFASLAQAKVKGSIKSMSIDELWRILSPGNGPIPSSGIFVRKDVDPTVVDLFLLLYKQSLTLS LQDLELTASIVSEAMGGFPVPILKKSFSGIDYEFKAASEIKDEVVSYLETLRELDESLVGDLNFDEFFYEK
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33856; Mature: 33856
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLMVTLLVIVMVVIGFGNYLYINPIGPTLVPIARLIHDSPDGKTIAEGFSIEFWKTVD CHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHH QALALVISGKADFALLPVTIGAKLAAEGVPIKLAAVSMWGGFYFVSRNEPIEGVEDLLGK HHHHHHCCCCCCEEEEEEECCCHHHCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHH AVYTLHAPGQTADVILRGVLEKLGYEVNKDIRIVYVAGPEALQLFAAGKADILLLPEPFA HEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHEECCCCCEEECCCHHH SLAQAKVKGSIKSMSIDELWRILSPGNGPIPSSGIFVRKDVDPTVVDLFLLLYKQSLTLS HHHHHHHHCCHHCCCHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEEE LQDLELTASIVSEAMGGFPVPILKKSFSGIDYEFKAASEIKDEVVSYLETLRELDESLVG EHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHC DLNFDEFFYEK CCCHHHHHCCC >Mature Secondary Structure MKQLMVTLLVIVMVVIGFGNYLYINPIGPTLVPIARLIHDSPDGKTIAEGFSIEFWKTVD CHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHH QALALVISGKADFALLPVTIGAKLAAEGVPIKLAAVSMWGGFYFVSRNEPIEGVEDLLGK HHHHHHCCCCCCEEEEEEECCCHHHCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHH AVYTLHAPGQTADVILRGVLEKLGYEVNKDIRIVYVAGPEALQLFAAGKADILLLPEPFA HEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHEECCCCCEEECCCHHH SLAQAKVKGSIKSMSIDELWRILSPGNGPIPSSGIFVRKDVDPTVVDLFLLLYKQSLTLS HHHHHHHHCCHHCCCHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEEE LQDLELTASIVSEAMGGFPVPILKKSFSGIDYEFKAASEIKDEVVSYLETLRELDESLVG EHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHC DLNFDEFFYEK CCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA