| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617899
Identifier: 239617899
GI number: 239617899
Start: 1639267
End: 1640628
Strand: Direct
Name: 239617899
Synonym: Kole_1527
Alternate gene names: NA
Gene position: 1639267-1640628 (Clockwise)
Preceding gene: 239617898
Following gene: 239617903
Centisome position: 71.21
GC content: 40.9
Gene sequence:
>1362_bases TTGCCTCTTTTTTTCCTTTTTCTTTCACTTGCTTTTGGGGTATCTTCTGGAATTTCGATGCATTTTACGCTCTGGAGTAC CACAGCGCTCTTTTTTCTTTTTGTAGCTTTTCTTTTTATTACCCGAAAAAATAGGCTGGTTGTTTTTATTTCCGTGTTTT GGTTATTTGGTATACTTCTTGGATACAGTACTTTCCCGGTTTTAGAGAATTCGCAGGTTGAATACGTTGGAATCGTGGAG AAGGTTGAATGGGAGAGAAGTGTCGTAGCCTCTTCTGGATATATGCTCGAAGAAGGTTCATGGAAGAAACTTCGCATACC TGTAAAAATAAAATTGCCGAAGTTGAGAAATTATCAAAAAGCACCGGAAGACAGGCAGGTTATCTGGGTTGCCGGAGAGC TTCGTAAGGTCAATAGGTATCCTTTCTATGAAATCACCGCTGAGATTTTCGGAGTTGCACCTTCGTTTGGGCCTGTGGAT AGACTTGCCGGTAACACCAGAGAATACTTTGAACGCAGACTAACAGGGGCAGGGATTAATTCGGCGATTCCTTTCGCTTT GTTTCTTGGGAATAAGAGCAAGCTCTCCTATGGTCTAAGGAAGGCTATAAATGATCTCGGTCTCTCGCATATTTTTGCCG TCTCGGGAATGCATGTGGGAATTTTTTATCTTATAACGGAAATGCTTCTTGCAGTGTTTTTGTTGCCAAAAAGGTTTAGG CTACTTACCGTTGTGCTCCTGCTTTTACTTTATATATTGTCAACAGGACCATCGATTTCAGCGACAAGGGCATTCCTTGT TTTCGCACTGTACAGTTTTTTTGCCTGTTTGGATTATCCTCAACATCCCTTGAACATTCTCGGATTTGCTGGTATTCTGA TGCTGGTTCATTCTCCAATAATAATAGCTTCGGTCGCTTTTCAACTTAGTTTTGTAGCTACCGCCGGGATTCTCATTTTG CTTCCCATACTTATGGCAGGGAATTCGGGGCTCTTTAAGGGGATGGTATCGGTAAGCATTGCCGCACAAATAGCAGTATT TCCTTTGACTGTGGTGACTTTTGAAGCTGTACCTCTTTTGACTATTCCATTAACAATCGTCATGGTACCTTTTTTTGTTT TCCCAATATTCGTCGGTCTGATTTTGACCATCGTTTTTTCATCACTAAAAATAATCCCCCTTGCAATCATAACAGCAAAG GGGGTAAATTTTCTGTCTTTGTTTTTTGAAAAAGGGCTTCACAAAATTTCAGAGCTTGGACTGATAGTAACTGTACCTTT TCCGTGGTCTTATTTTGTGGCGTTGTTAGTCTCTTATTCTTTGTTTGCAATACTCTTCTGGCATTCAGAGCAAAGCCCGT AA
Upstream 100 bases:
>100_bases GGTTATCGGTACCATATATGCGGTTGATGAGATTCCATTGATGCTTGCCCATGCCATGAGACTTGAAAAATACGGAGCGT AAGGGAGGAGGTATCCTCCC
Downstream 100 bases:
>100_bases AACTTAAGTTGGTGGTCGGTTATTTTGAAACCGGTTTTTTCCTCTATGAGATTCTCAAGACCATCGAGAAGATCTTCCGG AAATTCGATAACCTTACCGC
Product: ComEC/Rec2-related protein
Products: NA
Alternate protein names: DNA Internalization-Related Competence; ComEC/Rec2 Family Protein; Comec/Rec2-Related Protein; Competence Protein; Competence Membrane Protein; DNA Internalization-Like Competence; ComE-Like Competence Protein; ComEC/Rec2-Like Protein; Competence Related Membrane Protein; COME Operon
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MPLFFLFLSLAFGVSSGISMHFTLWSTTALFFLFVAFLFITRKNRLVVFISVFWLFGILLGYSTFPVLENSQVEYVGIVE KVEWERSVVASSGYMLEEGSWKKLRIPVKIKLPKLRNYQKAPEDRQVIWVAGELRKVNRYPFYEITAEIFGVAPSFGPVD RLAGNTREYFERRLTGAGINSAIPFALFLGNKSKLSYGLRKAINDLGLSHIFAVSGMHVGIFYLITEMLLAVFLLPKRFR LLTVVLLLLLYILSTGPSISATRAFLVFALYSFFACLDYPQHPLNILGFAGILMLVHSPIIIASVAFQLSFVATAGILIL LPILMAGNSGLFKGMVSVSIAAQIAVFPLTVVTFEAVPLLTIPLTIVMVPFFVFPIFVGLILTIVFSSLKIIPLAIITAK GVNFLSLFFEKGLHKISELGLIVTVPFPWSYFVALLVSYSLFAILFWHSEQSP
Sequences:
>Translated_453_residues MPLFFLFLSLAFGVSSGISMHFTLWSTTALFFLFVAFLFITRKNRLVVFISVFWLFGILLGYSTFPVLENSQVEYVGIVE KVEWERSVVASSGYMLEEGSWKKLRIPVKIKLPKLRNYQKAPEDRQVIWVAGELRKVNRYPFYEITAEIFGVAPSFGPVD RLAGNTREYFERRLTGAGINSAIPFALFLGNKSKLSYGLRKAINDLGLSHIFAVSGMHVGIFYLITEMLLAVFLLPKRFR LLTVVLLLLLYILSTGPSISATRAFLVFALYSFFACLDYPQHPLNILGFAGILMLVHSPIIIASVAFQLSFVATAGILIL LPILMAGNSGLFKGMVSVSIAAQIAVFPLTVVTFEAVPLLTIPLTIVMVPFFVFPIFVGLILTIVFSSLKIIPLAIITAK GVNFLSLFFEKGLHKISELGLIVTVPFPWSYFVALLVSYSLFAILFWHSEQSP >Mature_452_residues PLFFLFLSLAFGVSSGISMHFTLWSTTALFFLFVAFLFITRKNRLVVFISVFWLFGILLGYSTFPVLENSQVEYVGIVEK VEWERSVVASSGYMLEEGSWKKLRIPVKIKLPKLRNYQKAPEDRQVIWVAGELRKVNRYPFYEITAEIFGVAPSFGPVDR LAGNTREYFERRLTGAGINSAIPFALFLGNKSKLSYGLRKAINDLGLSHIFAVSGMHVGIFYLITEMLLAVFLLPKRFRL LTVVLLLLLYILSTGPSISATRAFLVFALYSFFACLDYPQHPLNILGFAGILMLVHSPIIIASVAFQLSFVATAGILILL PILMAGNSGLFKGMVSVSIAAQIAVFPLTVVTFEAVPLLTIPLTIVMVPFFVFPIFVGLILTIVFSSLKIIPLAIITAKG VNFLSLFFEKGLHKISELGLIVTVPFPWSYFVALLVSYSLFAILFWHSEQSP
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50535; Mature: 50404
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLFFLFLSLAFGVSSGISMHFTLWSTTALFFLFVAFLFITRKNRLVVFISVFWLFGILL CHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH GYSTFPVLENSQVEYVGIVEKVEWERSVVASSGYMLEEGSWKKLRIPVKIKLPKLRNYQK CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEEECCCCCCCCC APEDRQVIWVAGELRKVNRYPFYEITAEIFGVAPSFGPVDRLAGNTREYFERRLTGAGIN CCCCCEEEEEEHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHCCCCCC SAIPFALFLGNKSKLSYGLRKAINDLGLSHIFAVSGMHVGIFYLITEMLLAVFLLPKRFR CCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LLTVVLLLLLYILSTGPSISATRAFLVFALYSFFACLDYPQHPLNILGFAGILMLVHSPI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHH IIASVAFQLSFVATAGILILLPILMAGNSGLFKGMVSVSIAAQIAVFPLTVVTFEAVPLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH TIPLTIVMVPFFVFPIFVGLILTIVFSSLKIIPLAIITAKGVNFLSLFFEKGLHKISELG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCHHHHHHHHHHHHHHHHHCC LIVTVPFPWSYFVALLVSYSLFAILFWHSEQSP EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PLFFLFLSLAFGVSSGISMHFTLWSTTALFFLFVAFLFITRKNRLVVFISVFWLFGILL HHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH GYSTFPVLENSQVEYVGIVEKVEWERSVVASSGYMLEEGSWKKLRIPVKIKLPKLRNYQK CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEEECCCCCCCCC APEDRQVIWVAGELRKVNRYPFYEITAEIFGVAPSFGPVDRLAGNTREYFERRLTGAGIN CCCCCEEEEEEHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHCCCCCC SAIPFALFLGNKSKLSYGLRKAINDLGLSHIFAVSGMHVGIFYLITEMLLAVFLLPKRFR CCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LLTVVLLLLLYILSTGPSISATRAFLVFALYSFFACLDYPQHPLNILGFAGILMLVHSPI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHH IIASVAFQLSFVATAGILILLPILMAGNSGLFKGMVSVSIAAQIAVFPLTVVTFEAVPLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH TIPLTIVMVPFFVFPIFVGLILTIVFSSLKIIPLAIITAKGVNFLSLFFEKGLHKISELG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCHHHHHHHHHHHHHHHHHCC LIVTVPFPWSYFVALLVSYSLFAILFWHSEQSP EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA