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The map label for this gene is 239617798

Identifier: 239617798

GI number: 239617798

Start: 1517019

End: 1518203

Strand: Direct

Name: 239617798

Synonym: Kole_1423

Alternate gene names: NA

Gene position: 1517019-1518203 (Clockwise)

Preceding gene: 239617794

Following gene: 239617799

Centisome position: 65.9

GC content: 38.82

Gene sequence:

>1185_bases
ATGAAAAATGTGGTGGAAGATTATTCAAAAAGGTACAGGAAAGCTCGCAAAAAGGAAAAATCCGAAATTCTAGAAGAGTT
CACCCGAGTTACCAAATATAATCGTAGTTATGCATCGTTTTTACTACGAGGAGCTTCAAAAAAGCGAAAGACAACCTCAC
CCAGCCAGAAAAAGGGTCGAAAGAAAAAATATGATCACAAAGTCTTCGTGAAACTCGTGAAGATATGGGAGATAATGGAT
TTTCCATGTGGTAAAAGGCTCGAAGCAGTGATGGACGAAGTAATAGATAATCTTGTTCGTAATGGGCATCTAACATTGAC
TGAAGAAACAAAGAGGAAGCTTCTTAATATAAGTGCTTCCACTATCGATAGATTGTTATCCAGCGAGAGGAAAAAGATGG
AACTCAAAGGACGATCTCATACAAAACCCGGAACACTTCTGAAAAAGCACATACGAATAAAAACACATTACGAGTGGGAC
GATACAAGACCAGGCTTTGTTGAGATTGACCTCGTTGGGCATGATGGCGGGAGTGTAAGTGGTGATTTTTGCTACAGCCT
CAACATGGTAGATGTAGCAAGTGGTTGGAGTGTAGTGGCACCAATAAGAAACAAAGCGCAAATTTGGACATTAAAAGCTA
TAATTCAGTTGAGGAAAACGCTTCCCTTCACTTTATTAGGTATTCACTCAGATAACGGATCAGAATTTATTAATAGACAC
ATATACCGTTATTGTGAAGATGAAGGGCTTCTATTCACCAGAACCCGGAGTTACAACAAGAATGATAATTGTCATGTCGA
ACAAAAGAACTGGTCTGTTGTAAGAAGAGCCGTTGGATATTACAGATACGACACAGAGGAAGAATTCCAAATACTAAAGG
AGTTGTATGCGTCTCTGAATCTGTACAATAATCATTTTCAGCCAAATCAGAAAATCATTGAGAAAATTAGAAAAGGAAAC
AAGGTAAGCAAGAAATACGACCGCCCTACTACACCATACGAAAGGATCATGCAATCACCCTGGGTTGACCAAAATACAAA
AGACAGGCTTCGCAAACAACACGAAGCCCTAGACATTTACAAACTCAAGAGTATAATAACTCATTTCCAAGAACAATTAG
TGAACATCCAGATTGATAAATCGAAAGGAGGGATCCTCAACTATGTCCCTCTCAATTTCAAGTAG

Upstream 100 bases:

>100_bases
TCGAAAAGGGAACGTTGCGTCAAAAATAAATCTACTCAAAAAAGAGGGATAATCTTCTCGAATACCCGGGAAGGTAGGCG
AGAAGATGAAGAGGTTAGAT

Downstream 100 bases:

>100_bases
ATTCTATTTTGAGGCGTCCATCCTATTTCAAGTAGATTTATTTTTGAGGCATTACGGATTTCGAGTTACCCGAAAAAATC
TTAGCAGTAGGATATTCGAA

Product: Integrase catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKNVVEDYSKRYRKARKKEKSEILEEFTRVTKYNRSYASFLLRGASKKRKTTSPSQKKGRKKKYDHKVFVKLVKIWEIMD
FPCGKRLEAVMDEVIDNLVRNGHLTLTEETKRKLLNISASTIDRLLSSERKKMELKGRSHTKPGTLLKKHIRIKTHYEWD
DTRPGFVEIDLVGHDGGSVSGDFCYSLNMVDVASGWSVVAPIRNKAQIWTLKAIIQLRKTLPFTLLGIHSDNGSEFINRH
IYRYCEDEGLLFTRTRSYNKNDNCHVEQKNWSVVRRAVGYYRYDTEEEFQILKELYASLNLYNNHFQPNQKIIEKIRKGN
KVSKKYDRPTTPYERIMQSPWVDQNTKDRLRKQHEALDIYKLKSIITHFQEQLVNIQIDKSKGGILNYVPLNFK

Sequences:

>Translated_394_residues
MKNVVEDYSKRYRKARKKEKSEILEEFTRVTKYNRSYASFLLRGASKKRKTTSPSQKKGRKKKYDHKVFVKLVKIWEIMD
FPCGKRLEAVMDEVIDNLVRNGHLTLTEETKRKLLNISASTIDRLLSSERKKMELKGRSHTKPGTLLKKHIRIKTHYEWD
DTRPGFVEIDLVGHDGGSVSGDFCYSLNMVDVASGWSVVAPIRNKAQIWTLKAIIQLRKTLPFTLLGIHSDNGSEFINRH
IYRYCEDEGLLFTRTRSYNKNDNCHVEQKNWSVVRRAVGYYRYDTEEEFQILKELYASLNLYNNHFQPNQKIIEKIRKGN
KVSKKYDRPTTPYERIMQSPWVDQNTKDRLRKQHEALDIYKLKSIITHFQEQLVNIQIDKSKGGILNYVPLNFK
>Mature_394_residues
MKNVVEDYSKRYRKARKKEKSEILEEFTRVTKYNRSYASFLLRGASKKRKTTSPSQKKGRKKKYDHKVFVKLVKIWEIMD
FPCGKRLEAVMDEVIDNLVRNGHLTLTEETKRKLLNISASTIDRLLSSERKKMELKGRSHTKPGTLLKKHIRIKTHYEWD
DTRPGFVEIDLVGHDGGSVSGDFCYSLNMVDVASGWSVVAPIRNKAQIWTLKAIIQLRKTLPFTLLGIHSDNGSEFINRH
IYRYCEDEGLLFTRTRSYNKNDNCHVEQKNWSVVRRAVGYYRYDTEEEFQILKELYASLNLYNNHFQPNQKIIEKIRKGN
KVSKKYDRPTTPYERIMQSPWVDQNTKDRLRKQHEALDIYKLKSIITHFQEQLVNIQIDKSKGGILNYVPLNFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 46430; Mature: 46430

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVVEDYSKRYRKARKKEKSEILEEFTRVTKYNRSYASFLLRGASKKRKTTSPSQKKGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHCC
KKKYDHKVFVKLVKIWEIMDFPCGKRLEAVMDEVIDNLVRNGHLTLTEETKRKLLNISAS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCHH
TIDRLLSSERKKMELKGRSHTKPGTLLKKHIRIKTHYEWDDTRPGFVEIDLVGHDGGSVS
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCCCCCCCEEEEEEEECCCCCCC
GDFCYSLNMVDVASGWSVVAPIRNKAQIWTLKAIIQLRKTLPFTLLGIHSDNGSEFINRH
CCEEEEECEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH
IYRYCEDEGLLFTRTRSYNKNDNCHVEQKNWSVVRRAVGYYRYDTEEEFQILKELYASLN
HHHHHCCCCEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LYNNHFQPNQKIIEKIRKGNKVSKKYDRPTTPYERIMQSPWVDQNTKDRLRKQHEALDIY
HHCCCCCCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KLKSIITHFQEQLVNIQIDKSKGGILNYVPLNFK
HHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCC
>Mature Secondary Structure
MKNVVEDYSKRYRKARKKEKSEILEEFTRVTKYNRSYASFLLRGASKKRKTTSPSQKKGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHCC
KKKYDHKVFVKLVKIWEIMDFPCGKRLEAVMDEVIDNLVRNGHLTLTEETKRKLLNISAS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCHH
TIDRLLSSERKKMELKGRSHTKPGTLLKKHIRIKTHYEWDDTRPGFVEIDLVGHDGGSVS
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCCCCCCCEEEEEEEECCCCCCC
GDFCYSLNMVDVASGWSVVAPIRNKAQIWTLKAIIQLRKTLPFTLLGIHSDNGSEFINRH
CCEEEEECEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH
IYRYCEDEGLLFTRTRSYNKNDNCHVEQKNWSVVRRAVGYYRYDTEEEFQILKELYASLN
HHHHHCCCCEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LYNNHFQPNQKIIEKIRKGNKVSKKYDRPTTPYERIMQSPWVDQNTKDRLRKQHEALDIY
HHCCCCCCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KLKSIITHFQEQLVNIQIDKSKGGILNYVPLNFK
HHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]