| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239617591
Identifier: 239617591
GI number: 239617591
Start: 1287863
End: 1288621
Strand: Reverse
Name: 239617591
Synonym: Kole_1211
Alternate gene names: NA
Gene position: 1288621-1287863 (Counterclockwise)
Preceding gene: 239617592
Following gene: 239617590
Centisome position: 55.98
GC content: 43.48
Gene sequence:
>759_bases TTGAGAGTGGTCTCATGTGTGGTTGAAGATGATATAAAGTGCAAAAAGGATGCAGAGCTATTTATGGAAAAATGTTTGCA ACGCTCACAGGGTGCAACGCTAGTTGTTATGCCGGCGCTTATAGGTTTTTACTTCGATGATTTTCTTTCTACCGCTGCAC ACCTCTCTAAAAGTTATGATGATATGTATATATGTTTTGGAAGCTGCATGGAAGACGGAAAACATGCGTCCTTTATTATG AAGAATGGGGAGATTGTTCTGAAGCAGTACCAGATATATCTGTCTTCCTGGGAGCGTGAGATAGGGTTTTCACGAGGAAA CGATCTTGAGATCGTTGAAATAAATGGTTTTAAGGTAGCCATCGTACTTTCAACAGACGCGTTTTACCCTCAGGTACCCC GATACGCTGCTCTCAAGGGTGTGGATCTTGTGCTCACACCTATGGCAATAAGGAAAGAGGTTTTTCGTGTTCCACTACAG GCTTCAGGAATGTGGATGAACGTACAGATGAATTTGTTCTTTGCTGCTGAAAGCGGGTTCAAGGGGGAGTGGAACAGGAT GAAATTCCACAGCCTCTCCGCAATCCATGCCCCACTTGAAATAACAGAGAGAGGAACTGGTCTTCTCGCTATCGAAAAGG GAGATGGTGCTATCCTTGATGTTTCGCTTGATGGGCTCGACAGTGAAAAAGCAAAAAGGGTATTTGATCCCCTCAGGCAA TTGAATACTGATTTTTATCTGAGGGAGGAATTGTTTTGA
Upstream 100 bases:
>100_bases AGCAAATGAAAAGCAGAAAAGCTTGAAATAGGTGCCGTTTTGACAAGGAAAATTGGGCACTTCGTTCGTAGCTTGTTAAA AGCACCAGGGGGAATGGAAA
Downstream 100 bases:
>100_bases AACTCCTGCGCAGATTTTTTGAGAAGAAACTGACCTTAAAACGCGCTCTGCGAGTGCTAGACGGGATCCATCCCACGTTG GTAAGGAAGATCTCGTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase Carbon-Nitrogen Family
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MRVVSCVVEDDIKCKKDAELFMEKCLQRSQGATLVVMPALIGFYFDDFLSTAAHLSKSYDDMYICFGSCMEDGKHASFIM KNGEIVLKQYQIYLSSWEREIGFSRGNDLEIVEINGFKVAIVLSTDAFYPQVPRYAALKGVDLVLTPMAIRKEVFRVPLQ ASGMWMNVQMNLFFAAESGFKGEWNRMKFHSLSAIHAPLEITERGTGLLAIEKGDGAILDVSLDGLDSEKAKRVFDPLRQ LNTDFYLREELF
Sequences:
>Translated_252_residues MRVVSCVVEDDIKCKKDAELFMEKCLQRSQGATLVVMPALIGFYFDDFLSTAAHLSKSYDDMYICFGSCMEDGKHASFIM KNGEIVLKQYQIYLSSWEREIGFSRGNDLEIVEINGFKVAIVLSTDAFYPQVPRYAALKGVDLVLTPMAIRKEVFRVPLQ ASGMWMNVQMNLFFAAESGFKGEWNRMKFHSLSAIHAPLEITERGTGLLAIEKGDGAILDVSLDGLDSEKAKRVFDPLRQ LNTDFYLREELF >Mature_252_residues MRVVSCVVEDDIKCKKDAELFMEKCLQRSQGATLVVMPALIGFYFDDFLSTAAHLSKSYDDMYICFGSCMEDGKHASFIM KNGEIVLKQYQIYLSSWEREIGFSRGNDLEIVEINGFKVAIVLSTDAFYPQVPRYAALKGVDLVLTPMAIRKEVFRVPLQ ASGMWMNVQMNLFFAAESGFKGEWNRMKFHSLSAIHAPLEITERGTGLLAIEKGDGAILDVSLDGLDSEKAKRVFDPLRQ LNTDFYLREELF
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28533; Mature: 28533
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVSCVVEDDIKCKKDAELFMEKCLQRSQGATLVVMPALIGFYFDDFLSTAAHLSKSYD CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCC DMYICFGSCMEDGKHASFIMKNGEIVLKQYQIYLSSWEREIGFSRGNDLEIVEINGFKVA CEEEEEEHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEE IVLSTDAFYPQVPRYAALKGVDLVLTPMAIRKEVFRVPLQASGMWMNVQMNLFFAAESGF EEEECCCCCCCCCCHHHHCCCEEEECCHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCC KGEWNRMKFHSLSAIHAPLEITERGTGLLAIEKGDGAILDVSLDGLDSEKAKRVFDPLRQ CCCCCCEEEEHHHHHCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHH LNTDFYLREELF CCCCEEEHHHCC >Mature Secondary Structure MRVVSCVVEDDIKCKKDAELFMEKCLQRSQGATLVVMPALIGFYFDDFLSTAAHLSKSYD CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCC DMYICFGSCMEDGKHASFIMKNGEIVLKQYQIYLSSWEREIGFSRGNDLEIVEINGFKVA CEEEEEEHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEE IVLSTDAFYPQVPRYAALKGVDLVLTPMAIRKEVFRVPLQASGMWMNVQMNLFFAAESGF EEEECCCCCCCCCCHHHHCCCEEEECCHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCC KGEWNRMKFHSLSAIHAPLEITERGTGLLAIEKGDGAILDVSLDGLDSEKAKRVFDPLRQ CCCCCCEEEEHHHHHCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHH LNTDFYLREELF CCCCEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA