Click here to switch to the map view.

The map label for this gene is yuxL [H]

Identifier: 239617572

GI number: 239617572

Start: 1262698

End: 1264701

Strand: Direct

Name: yuxL [H]

Synonym: Kole_1190

Alternate gene names: 239617572

Gene position: 1262698-1264701 (Clockwise)

Preceding gene: 239617571

Following gene: 239617573

Centisome position: 54.85

GC content: 41.22

Gene sequence:

>2004_bases
ATGGAAAACAGATATTTCACAATTGAAGAGATGGTTTCATTACCTGTGCTTAGAACCCCTGTTATAAATCCCGCAGGTAA
TAGAGTAGCTTACGTCAAAATGAATACCGATTGGGATGATAATGAATTTCGAAGCCAGGTATGGGTGTATGATGCGGAAA
AAGATTCCTCTTACCCGATAACTGACTTCAAAACAGAGAGTACAATGCCTTCGTGGTCACCGGATTCGCAGACACTTGCG
TATCTTTCAAACGCTGGGATAAACGGTGATAAAAAGAAGCAGATTTTCGTCAAACGTTCCCCTGAAGAAGCAGCAATTCA
AATTACCAGTGCACCTGACGGAGTGGATTCTTACAGGTGGTCTCCAGATGGAAAGGGTTTCTTCTATCTCAGTACCCCTG
AGGATAAAGCGATCAAGAAAAGGAAAGAACTCTACGGTGATTTTGAATATGTGGATAAAGAATATCGAACGAGATGTCTT
TACTACGTTTCAATCGATAAGGCTATTTCGAAGTTTGAAGAAACTTTGAAAACCCCTAAAGATATGAGAAAGGGTCAAGA
TGACAAAGAAGTTGAAACTGAAGATTTAGCAGAAAAACTTTTTTGCCCGGAGGATTTTCTTATAGTCAATTTTGTAATAA
CACCAGATTCCAAACGGGTATTATTTATTGCTGTTCCGCCCCCTAGCACAGCAAACAACATGGAGGAATCGGAACTTTAT
GTATTTGATTTAGAAAGCAAAAAGATCGAGAAGCTCGGTATTTCAAGGCTCCGTCCAGATTTTCACCTTTCTCCAAATGG
CAGGAAATTAGCATATACGCTTACCAAAGAAGAGTACCCGTGGCAATCAAACAATCCCCTGGAGATACTCGATCTGGAAA
CTGGAAAAAGGGAGAAGATACATATAGATGTTGATTCCATCATCGAAATTGTAGCTTACACGAAGAAGGGATTGTACATA
AGCTGGAAAGAAGGTACAAGAATAAAGGTCGGTTGGTTGAATCCTGATGGAAAGATTGAAACTCTGACAGACGATAATTC
CACGGTTTCCTGGTCTGCGGTGTCCAGAGATACAGATAAACTGGTTTGCATAAAAGCGACGCCAATAGAACCTTTCGACA
TATATCTTGAAGGCAAAAAGATAACTGACGAAGGAAAGATTTACAAAGAAAGGATAATTTCCAGAAAGCAGCTTATACGC
TGGAAGAGCCTTGACGGTGTGGAGATAGAGGGCGTGCTGTCAACCCCACCAGACTTTGATCCTTCAAAGAGATACCCGTT
GCTTTTGATAGTGCACGGTGGTCCAACGTGGCTATCCTTTGATATCCCAACTTTTAGTAAAGCGTATCCTTTAGAACAGT
TTGTGGAAAAAGGGTTCATAGTTCTTGAACCCAATTATAGGGGAAGTGATGGTTACGGAGAAGAATTCAGAAGGCTCAAT
TACAGAAACCTTGGAATTGGTGATTACGCTGACGTCATATCCGGAGTTGATTATCTCATTGAGGAGGGAATTGCAGATCC
AGAAAGAATAGGCATAATGGGCTGGAGCCAGGGTGGATACATAACAGCCTTCTGCTCTTTATACAGTAACAGATTCAAAG
CTGCTTCTGTCGGTGCCGGGATAAGCGATTGGATAACGTATTACTGTGCTACAGATATTCATAATTTTACGGTGTATTTC
CTCGGTGAAACACCCTGGAAAGACGAAGAAATCTATAAAAAAACTTCTCCAATGACATACATAAAGAACGCCAGTACCCC
AACATTGATACAGCACGGCGATAATGATCAGCGCGTGCCCACTCCCAATGCCTATAAGCTTTATCAGGGTCTTAAAGATA
TGGGAGTGCCTGTGGAACTCGTTATCTTTAAGGGAATGGGTCATGGCATTCATAAGCTCGGAATCGCAAGAGCGATTATG
AAACAAAATCTTATCTGGTTTTCGCATTATTTGCTCGGCGAACCAATGGAAGGATTTTACCTGAAAGATCATTTGAATGA
TTAG

Upstream 100 bases:

>100_bases
CAACGAATTTGGTGTTTCAATCGACATTGTGCCGGATATCGAAATTACGTCTTTCAAAGAGCTGTATGAGCTCATTAAAA
ACGAAGGAAAGGGGAAATGA

Downstream 100 bases:

>100_bases
TTCGTAGAGAAAGGAGATTTTGTGAATTACTTCACTTTCTGATTATAATTGAATATAATAGATGCGGTAATGTTTATACA
GGTGAAGTTGTGTACAAAAC

Product: peptidase S9 prolyl oligopeptidase active site domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MENRYFTIEEMVSLPVLRTPVINPAGNRVAYVKMNTDWDDNEFRSQVWVYDAEKDSSYPITDFKTESTMPSWSPDSQTLA
YLSNAGINGDKKKQIFVKRSPEEAAIQITSAPDGVDSYRWSPDGKGFFYLSTPEDKAIKKRKELYGDFEYVDKEYRTRCL
YYVSIDKAISKFEETLKTPKDMRKGQDDKEVETEDLAEKLFCPEDFLIVNFVITPDSKRVLFIAVPPPSTANNMEESELY
VFDLESKKIEKLGISRLRPDFHLSPNGRKLAYTLTKEEYPWQSNNPLEILDLETGKREKIHIDVDSIIEIVAYTKKGLYI
SWKEGTRIKVGWLNPDGKIETLTDDNSTVSWSAVSRDTDKLVCIKATPIEPFDIYLEGKKITDEGKIYKERIISRKQLIR
WKSLDGVEIEGVLSTPPDFDPSKRYPLLLIVHGGPTWLSFDIPTFSKAYPLEQFVEKGFIVLEPNYRGSDGYGEEFRRLN
YRNLGIGDYADVISGVDYLIEEGIADPERIGIMGWSQGGYITAFCSLYSNRFKAASVGAGISDWITYYCATDIHNFTVYF
LGETPWKDEEIYKKTSPMTYIKNASTPTLIQHGDNDQRVPTPNAYKLYQGLKDMGVPVELVIFKGMGHGIHKLGIARAIM
KQNLIWFSHYLLGEPMEGFYLKDHLND

Sequences:

>Translated_667_residues
MENRYFTIEEMVSLPVLRTPVINPAGNRVAYVKMNTDWDDNEFRSQVWVYDAEKDSSYPITDFKTESTMPSWSPDSQTLA
YLSNAGINGDKKKQIFVKRSPEEAAIQITSAPDGVDSYRWSPDGKGFFYLSTPEDKAIKKRKELYGDFEYVDKEYRTRCL
YYVSIDKAISKFEETLKTPKDMRKGQDDKEVETEDLAEKLFCPEDFLIVNFVITPDSKRVLFIAVPPPSTANNMEESELY
VFDLESKKIEKLGISRLRPDFHLSPNGRKLAYTLTKEEYPWQSNNPLEILDLETGKREKIHIDVDSIIEIVAYTKKGLYI
SWKEGTRIKVGWLNPDGKIETLTDDNSTVSWSAVSRDTDKLVCIKATPIEPFDIYLEGKKITDEGKIYKERIISRKQLIR
WKSLDGVEIEGVLSTPPDFDPSKRYPLLLIVHGGPTWLSFDIPTFSKAYPLEQFVEKGFIVLEPNYRGSDGYGEEFRRLN
YRNLGIGDYADVISGVDYLIEEGIADPERIGIMGWSQGGYITAFCSLYSNRFKAASVGAGISDWITYYCATDIHNFTVYF
LGETPWKDEEIYKKTSPMTYIKNASTPTLIQHGDNDQRVPTPNAYKLYQGLKDMGVPVELVIFKGMGHGIHKLGIARAIM
KQNLIWFSHYLLGEPMEGFYLKDHLND
>Mature_667_residues
MENRYFTIEEMVSLPVLRTPVINPAGNRVAYVKMNTDWDDNEFRSQVWVYDAEKDSSYPITDFKTESTMPSWSPDSQTLA
YLSNAGINGDKKKQIFVKRSPEEAAIQITSAPDGVDSYRWSPDGKGFFYLSTPEDKAIKKRKELYGDFEYVDKEYRTRCL
YYVSIDKAISKFEETLKTPKDMRKGQDDKEVETEDLAEKLFCPEDFLIVNFVITPDSKRVLFIAVPPPSTANNMEESELY
VFDLESKKIEKLGISRLRPDFHLSPNGRKLAYTLTKEEYPWQSNNPLEILDLETGKREKIHIDVDSIIEIVAYTKKGLYI
SWKEGTRIKVGWLNPDGKIETLTDDNSTVSWSAVSRDTDKLVCIKATPIEPFDIYLEGKKITDEGKIYKERIISRKQLIR
WKSLDGVEIEGVLSTPPDFDPSKRYPLLLIVHGGPTWLSFDIPTFSKAYPLEQFVEKGFIVLEPNYRGSDGYGEEFRRLN
YRNLGIGDYADVISGVDYLIEEGIADPERIGIMGWSQGGYITAFCSLYSNRFKAASVGAGISDWITYYCATDIHNFTVYF
LGETPWKDEEIYKKTSPMTYIKNASTPTLIQHGDNDQRVPTPNAYKLYQGLKDMGVPVELVIFKGMGHGIHKLGIARAIM
KQNLIWFSHYLLGEPMEGFYLKDHLND

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=345, Percent_Identity=25.2173913043478, Blast_Score=99, Evalue=2e-20,
Organism=Homo sapiens, GI16933540, Length=245, Percent_Identity=29.7959183673469, Blast_Score=94, Evalue=5e-19,
Organism=Homo sapiens, GI18450280, Length=239, Percent_Identity=28.0334728033473, Blast_Score=86, Evalue=2e-16,
Organism=Homo sapiens, GI37577089, Length=239, Percent_Identity=28.0334728033473, Blast_Score=86, Evalue=2e-16,
Organism=Homo sapiens, GI18765694, Length=218, Percent_Identity=30.2752293577982, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI194394146, Length=241, Percent_Identity=24.896265560166, Blast_Score=71, Evalue=4e-12,
Organism=Homo sapiens, GI52426756, Length=260, Percent_Identity=28.0769230769231, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI295849272, Length=260, Percent_Identity=28.0769230769231, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI85787627, Length=260, Percent_Identity=28.0769230769231, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI295842359, Length=260, Percent_Identity=28.0769230769231, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI295842403, Length=260, Percent_Identity=28.0769230769231, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17552908, Length=209, Percent_Identity=34.4497607655502, Blast_Score=125, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI25149159, Length=471, Percent_Identity=22.0806794055202, Blast_Score=86, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17508019, Length=259, Percent_Identity=25.8687258687259, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17508017, Length=269, Percent_Identity=25.2788104089219, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI25144537, Length=341, Percent_Identity=22.8739002932551, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25144540, Length=341, Percent_Identity=22.8739002932551, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17550672, Length=236, Percent_Identity=25, Blast_Score=73, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17564632, Length=244, Percent_Identity=25.4098360655738, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17564634, Length=244, Percent_Identity=25.4098360655738, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6324793, Length=252, Percent_Identity=27.3809523809524, Blast_Score=80, Evalue=8e-16,
Organism=Drosophila melanogaster, GI45551969, Length=225, Percent_Identity=25.7777777777778, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45550825, Length=225, Percent_Identity=25.7777777777778, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45553511, Length=225, Percent_Identity=25.7777777777778, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 76402; Mature: 76402

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRYFTIEEMVSLPVLRTPVINPAGNRVAYVKMNTDWDDNEFRSQVWVYDAEKDSSYPI
CCCCEEEHHHHHCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCC
TDFKTESTMPSWSPDSQTLAYLSNAGINGDKKKQIFVKRSPEEAAIQITSAPDGVDSYRW
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCEE
SPDGKGFFYLSTPEDKAIKKRKELYGDFEYVDKEYRTRCLYYVSIDKAISKFEETLKTPK
CCCCCEEEEEECCCHHHHHHHHHHCCCHHHHCHHHCCEEEEEEEHHHHHHHHHHHHCCHH
DMRKGQDDKEVETEDLAEKLFCPEDFLIVNFVITPDSKRVLFIAVPPPSTANNMEESELY
HHHCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEE
VFDLESKKIEKLGISRLRPDFHLSPNGRKLAYTLTKEEYPWQSNNPLEILDLETGKREKI
EEECCCHHHHHHHHHHCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEE
HIDVDSIIEIVAYTKKGLYISWKEGTRIKVGWLNPDGKIETLTDDNSTVSWSAVSRDTDK
EEEHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCC
LVCIKATPIEPFDIYLEGKKITDEGKIYKERIISRKQLIRWKSLDGVEIEGVLSTPPDFD
EEEEEECCCCCEEEEEECCEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
PSKRYPLLLIVHGGPTWLSFDIPTFSKAYPLEQFVEKGFIVLEPNYRGSDGYGEEFRRLN
CCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCHHHHHCC
YRNLGIGDYADVISGVDYLIEEGIADPERIGIMGWSQGGYITAFCSLYSNRFKAASVGAG
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCEEEHEEHHHHCCCCCHHCCCC
ISDWITYYCATDIHNFTVYFLGETPWKDEEIYKKTSPMTYIKNASTPTLIQHGDNDQRVP
HHHHHHHHEECCCCCEEEEEECCCCCCCHHHHHHCCCEEEEECCCCCEEEEECCCCCCCC
TPNAYKLYQGLKDMGVPVELVIFKGMGHGIHKLGIARAIMKQNLIWFSHYLLGEPMEGFY
CCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEE
LKDHLND
ECCCCCC
>Mature Secondary Structure
MENRYFTIEEMVSLPVLRTPVINPAGNRVAYVKMNTDWDDNEFRSQVWVYDAEKDSSYPI
CCCCEEEHHHHHCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCC
TDFKTESTMPSWSPDSQTLAYLSNAGINGDKKKQIFVKRSPEEAAIQITSAPDGVDSYRW
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCEE
SPDGKGFFYLSTPEDKAIKKRKELYGDFEYVDKEYRTRCLYYVSIDKAISKFEETLKTPK
CCCCCEEEEEECCCHHHHHHHHHHCCCHHHHCHHHCCEEEEEEEHHHHHHHHHHHHCCHH
DMRKGQDDKEVETEDLAEKLFCPEDFLIVNFVITPDSKRVLFIAVPPPSTANNMEESELY
HHHCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEE
VFDLESKKIEKLGISRLRPDFHLSPNGRKLAYTLTKEEYPWQSNNPLEILDLETGKREKI
EEECCCHHHHHHHHHHCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEE
HIDVDSIIEIVAYTKKGLYISWKEGTRIKVGWLNPDGKIETLTDDNSTVSWSAVSRDTDK
EEEHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCC
LVCIKATPIEPFDIYLEGKKITDEGKIYKERIISRKQLIRWKSLDGVEIEGVLSTPPDFD
EEEEEECCCCCEEEEEECCEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
PSKRYPLLLIVHGGPTWLSFDIPTFSKAYPLEQFVEKGFIVLEPNYRGSDGYGEEFRRLN
CCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCHHHHHCC
YRNLGIGDYADVISGVDYLIEEGIADPERIGIMGWSQGGYITAFCSLYSNRFKAASVGAG
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCEEEHEEHHHHCCCCCHHCCCC
ISDWITYYCATDIHNFTVYFLGETPWKDEEIYKKTSPMTYIKNASTPTLIQHGDNDQRVP
HHHHHHHHEECCCCCEEEEEECCCCCCCHHHHHHCCCEEEEECCCCCEEEEECCCCCCCC
TPNAYKLYQGLKDMGVPVELVIFKGMGHGIHKLGIARAIMKQNLIWFSHYLLGEPMEGFY
CCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEE
LKDHLND
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]