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The map label for this gene is 239617571

Identifier: 239617571

GI number: 239617571

Start: 1262056

End: 1262697

Strand: Direct

Name: 239617571

Synonym: Kole_1189

Alternate gene names: NA

Gene position: 1262056-1262697 (Clockwise)

Preceding gene: 239617570

Following gene: 239617572

Centisome position: 54.82

GC content: 42.21

Gene sequence:

>642_bases
ATGTTCAAAAATACGATTTGGGATTTTGACGGTACTTTATGCGATACCTATCCTTCCATTGTTAGATCAATGAAGGAAGC
ATTGGAAGGTTTCGGCTATGAGGTTGCCGAAGAAGAGATTCTCTGGAATGTTAAGAAAACTCTTGGTTACGCTCTTGAGT
ATTACGCGGAGAAATTTGGACTGGGTGAAGCTCTGGAGAAAAAATTCGTGGAGCTTTCAAAGAAAGCTTCACCAACAGAG
CGCCCACTGTATGATTACACCAAAGAGATTTGCGAACTCATCATCGATCGTGGTGGCATGAACTTCATCGTAACGCATCG
GGATCTGGAATCTACCCTTAAGGTTACGGACTACTATGGGATAACGGAACTTTTTACGGAGATCGTGACCAGAGATCATG
GTTTTGCGAGAAAACCAGATCCCGAGGCTTTCAATTACATTGTTGAAAAATACAATCTCAGAAAAGAAGAAACCCTGGCA
ATCGGTGATCGTGCTCTCGACATCATCGCTGCTAAAAAGTGCGGAGTCAAAACCTGCTATTTCAACGAATTTGGTGTTTC
AATCGACATTGTGCCGGATATCGAAATTACGTCTTTCAAAGAGCTGTATGAGCTCATTAAAAACGAAGGAAAGGGGAAAT
GA

Upstream 100 bases:

>100_bases
ATGGGAGGCTGTGTTGAACAACTACGTGTGGTATCTGAAAAGTAATTAACGAGCGGCAATGCGTGTTATTACCCCTGACC
GAATAGAAGGTGAATTGAGC

Downstream 100 bases:

>100_bases
ATGGAAAACAGATATTTCACAATTGAAGAGATGGTTTCATTACCTGTGCTTAGAACCCCTGTTATAAATCCCGCAGGTAA
TAGAGTAGCTTACGTCAAAA

Product: HAD-superfamily hydrolase, subfamily IA, variant 1

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MFKNTIWDFDGTLCDTYPSIVRSMKEALEGFGYEVAEEEILWNVKKTLGYALEYYAEKFGLGEALEKKFVELSKKASPTE
RPLYDYTKEICELIIDRGGMNFIVTHRDLESTLKVTDYYGITELFTEIVTRDHGFARKPDPEAFNYIVEKYNLRKEETLA
IGDRALDIIAAKKCGVKTCYFNEFGVSIDIVPDIEITSFKELYELIKNEGKGK

Sequences:

>Translated_213_residues
MFKNTIWDFDGTLCDTYPSIVRSMKEALEGFGYEVAEEEILWNVKKTLGYALEYYAEKFGLGEALEKKFVELSKKASPTE
RPLYDYTKEICELIIDRGGMNFIVTHRDLESTLKVTDYYGITELFTEIVTRDHGFARKPDPEAFNYIVEKYNLRKEETLA
IGDRALDIIAAKKCGVKTCYFNEFGVSIDIVPDIEITSFKELYELIKNEGKGK
>Mature_213_residues
MFKNTIWDFDGTLCDTYPSIVRSMKEALEGFGYEVAEEEILWNVKKTLGYALEYYAEKFGLGEALEKKFVELSKKASPTE
RPLYDYTKEICELIIDRGGMNFIVTHRDLESTLKVTDYYGITELFTEIVTRDHGFARKPDPEAFNYIVEKYNLRKEETLA
IGDRALDIIAAKKCGVKTCYFNEFGVSIDIVPDIEITSFKELYELIKNEGKGK

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 24533; Mature: 24533

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKNTIWDFDGTLCDTYPSIVRSMKEALEGFGYEVAEEEILWNVKKTLGYALEYYAEKFG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LGEALEKKFVELSKKASPTERPLYDYTKEICELIIDRGGMNFIVTHRDLESTLKVTDYYG
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCC
ITELFTEIVTRDHGFARKPDPEAFNYIVEKYNLRKEETLAIGDRALDIIAAKKCGVKTCY
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
FNEFGVSIDIVPDIEITSFKELYELIKNEGKGK
EECCCCEEEEECCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFKNTIWDFDGTLCDTYPSIVRSMKEALEGFGYEVAEEEILWNVKKTLGYALEYYAEKFG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LGEALEKKFVELSKKASPTERPLYDYTKEICELIIDRGGMNFIVTHRDLESTLKVTDYYG
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCC
ITELFTEIVTRDHGFARKPDPEAFNYIVEKYNLRKEETLAIGDRALDIIAAKKCGVKTCY
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
FNEFGVSIDIVPDIEITSFKELYELIKNEGKGK
EECCCCEEEEECCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA