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The map label for this gene is yfeT [C]

Identifier: 239617566

GI number: 239617566

Start: 1256925

End: 1257776

Strand: Direct

Name: yfeT [C]

Synonym: Kole_1184

Alternate gene names: 239617566

Gene position: 1256925-1257776 (Clockwise)

Preceding gene: 239617556

Following gene: 239617567

Centisome position: 54.6

GC content: 39.32

Gene sequence:

>852_bases
ATGCAGGGAAAAGAAAATGTTCTTCTGACAATAGAAACGCTGAAAGATTCCTTTACAAAAACAGAGAAAAAGATAGCCAC
ATTTGTCGTAAAAAATCCACAGAAAGTGGTTTACATGTCCCTTACGGAAGTATCAGATATTCTTAAAGTTAGTGAGGGAT
CGATAGTCAGATTTTGTCAAAAACTTGGTTATACGGGCTTTCATCCTTTTAAGATTGCTTTGGCGGTTTCTGAAAATCAA
GAGAGCTTTTCGTCTTCTGAGTTTGATTTTAATTCCAGAGATCTTTCCAGTCTCAAAAATTATGTGGCCCAGAGGCACAT
AGATGTTATTAAAAATACCAGTGAATTCATCTCAGAAGAAATACTGGAAGCCTGTGTAGAAAAGATCTTAACTGCCAGAA
CCATATTAATTTCTGGTGTGGGAGCTTCTGGAAACACAGCGCATGATGCCTTTTACAAATTCATGAGGATTGGTCTCAAT
TGTAAGACATCGCATGATGCTCATATACAGGCAATGATTGCATCTGAGTTGAGAGAAGGCGATGTTTTGCTGGCTATATC
TCAAAGTGGCAGTACACTCGAGATTGTGGACATAGCAGACATAGCCAGAAAAGGTGGTGCAACCGTGATTGCCATAACAG
GATATGCCAGATCACCTTTAGCGCGGTTTGCTCATCATGTTCTCCTGACGCCAACCCGTGAGTCACCGTTTGAAAGTGGT
GCTTTGCGATCGAAAATAGCACAACTCTATGTTCTTGAACTATTATTTACTGCGGTTTTCCATAGAATGGAAGAAAAAGG
TAGAAAATTTATAGAAAGAACAGCTGATTCGGTGGCAAAGTGGATATATTAA

Upstream 100 bases:

>100_bases
TATCACCAAAAATCTTGCTTATGCTTTGTTTTGTTAGACTTTACATTTTTGAGGTGTGATATTATCATTGTGGAGAATAC
GCATTAAGGCGGTGAGCAAC

Downstream 100 bases:

>100_bases
AAAGATGGTTGGAGGTGCTTATGGAAAACGTTACTTTGAGCGAAATAAAGAGAACTCCGGAGCTCTTGAAGCAGGTTGAA
TCTGTTCCTTTCAAACTTGA

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MQGKENVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQKLGYTGFHPFKIALAVSENQ
ESFSSSEFDFNSRDLSSLKNYVAQRHIDVIKNTSEFISEEILEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLN
CKTSHDAHIQAMIASELREGDVLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESG
ALRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAKWIY

Sequences:

>Translated_283_residues
MQGKENVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQKLGYTGFHPFKIALAVSENQ
ESFSSSEFDFNSRDLSSLKNYVAQRHIDVIKNTSEFISEEILEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLN
CKTSHDAHIQAMIASELREGDVLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESG
ALRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAKWIY
>Mature_283_residues
MQGKENVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQKLGYTGFHPFKIALAVSENQ
ESFSSSEFDFNSRDLSSLKNYVAQRHIDVIKNTSEFISEEILEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLN
CKTSHDAHIQAMIASELREGDVLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESG
ALRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAKWIY

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=266, Percent_Identity=34.5864661654135, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI87082369, Length=269, Percent_Identity=28.6245353159851, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI87082130, Length=281, Percent_Identity=30.6049822064057, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1788159, Length=279, Percent_Identity=27.9569892473118, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31477; Mature: 31477

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGKENVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQ
CCCCCCEEEEEHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHHHHHCCCCHHHHHHH
KLGYTGFHPFKIALAVSENQESFSSSEFDFNSRDLSSLKNYVAQRHIDVIKNTSEFISEE
HHCCCCCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
ILEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLNCKTSHDAHIQAMIASELREG
HHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
DVLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESG
CEEEEEECCCCEEEEEEHHHHHHCCCCEEEEEECCCCCHHHHHHHHHEECCCCCCCCCCH
ALRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAKWIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGKENVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQ
CCCCCCEEEEEHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHHHHHCCCCHHHHHHH
KLGYTGFHPFKIALAVSENQESFSSSEFDFNSRDLSSLKNYVAQRHIDVIKNTSEFISEE
HHCCCCCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
ILEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLNCKTSHDAHIQAMIASELREG
HHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
DVLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESG
CEEEEEECCCCEEEEEEHHHHHHCCCCEEEEEECCCCCHHHHHHHHHEECCCCCCCCCCH
ALRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAKWIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]