Click here to switch to the map view.

The map label for this gene is ycfX [C]

Identifier: 239617558

GI number: 239617558

Start: 1245860

End: 1246750

Strand: Reverse

Name: ycfX [C]

Synonym: Kole_1176

Alternate gene names: 239617558

Gene position: 1246750-1245860 (Counterclockwise)

Preceding gene: 239617559

Following gene: 239617557

Centisome position: 54.16

GC content: 40.74

Gene sequence:

>891_bases
ATGAAAGCACTTGGAATCGATATAGGTGGTACTACAATTAAAGCAGGTATTATCGATGAAACTGGTAATTTACTTTTAAG
AAAGATTGTCCCTACAAATCGATCTCTAATGGAACAGTTGAAAGAAATTATCAGGACTCTCATGAAAAATGGGAACATTA
GCTGTATTGGAATCGGTTCTGCAGGGAGAATAGATCCGCAAACTGGTCATGTCAGATTTGCTACCACGAATCTTTCCAAT
TGGTCTGATGTCCCTCTGAAAACGGTTATCGAAGATTCATTCCACCTTCCAACTGTTGTCATCAATGATGCAAATGCTGC
CGCTTTTGGCGAGTGGTTCCTTCATTATAGAGATACATCTTCCCTTGTTCTGCTGACGATCGGAACAGGACTTGGTGGCG
GAATCGTGATAAATGGGCGGCTTGTTGAGGGAGAAAGAGGAGAAGCTGGAGAGATCGGCCACGTAATCCTTCACAGTGAT
GGAAAACAATGCAATTGCGGTAAAAAGGGTTGCGCTGAACAATATATTTCTATGCGTATAATCCACGAAAAAGTTGCTTC
CAGTAAAGGGAAAAGTTTAGACCGCTTCGAGCTTATAAAAGCTTTCAACGAAAAAGATCCGGAAGTCATTAAAGCTGTCG
AAGAAGTCTGTTCCGATTTGGCCCAGGTCGTCGATTGGATATTCAATTTCATCGATCCTGAAAACGTCATAGTGGGTGGA
GGAATTGCTGAACTTGGAGAAGATTTCTTGAAAATATTACGCTCTAAACTTGCTCCTTACGCTAAACATTCTTTATATGA
ACCATCTAACATCAAACTTGCAAAAACTGGCAACGATGCGGGTATAATAGGTGCAGCACTCTACAGTATGTATAAAAACG
CAAAAATTTGA

Upstream 100 bases:

>100_bases
GCCGGATTTATGATTATCTAGACCCTTTCTTTCCCTGGCATCGGCCGTTTGAAATAGGCTTTTTAAGAAACTCAGAGGAA
AGTGCAAATGGAGGCAGGAA

Downstream 100 bases:

>100_bases
ATGTGAGGGGAAAGATAGGAAATGAATGCTTTCAAAATTCGCGGTGTTGTCGAAGGGTTCTATGGAAAGCCCTGGTCTAT
GGAAGACAGAATGGAAATGA

Product: ROK family protein

Products: ADP; D-glucose 6-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKALGIDIGGTTIKAGIIDETGNLLLRKIVPTNRSLMEQLKEIIRTLMKNGNISCIGIGSAGRIDPQTGHVRFATTNLSN
WSDVPLKTVIEDSFHLPTVVINDANAAAFGEWFLHYRDTSSLVLLTIGTGLGGGIVINGRLVEGERGEAGEIGHVILHSD
GKQCNCGKKGCAEQYISMRIIHEKVASSKGKSLDRFELIKAFNEKDPEVIKAVEEVCSDLAQVVDWIFNFIDPENVIVGG
GIAELGEDFLKILRSKLAPYAKHSLYEPSNIKLAKTGNDAGIIGAALYSMYKNAKI

Sequences:

>Translated_296_residues
MKALGIDIGGTTIKAGIIDETGNLLLRKIVPTNRSLMEQLKEIIRTLMKNGNISCIGIGSAGRIDPQTGHVRFATTNLSN
WSDVPLKTVIEDSFHLPTVVINDANAAAFGEWFLHYRDTSSLVLLTIGTGLGGGIVINGRLVEGERGEAGEIGHVILHSD
GKQCNCGKKGCAEQYISMRIIHEKVASSKGKSLDRFELIKAFNEKDPEVIKAVEEVCSDLAQVVDWIFNFIDPENVIVGG
GIAELGEDFLKILRSKLAPYAKHSLYEPSNIKLAKTGNDAGIIGAALYSMYKNAKI
>Mature_296_residues
MKALGIDIGGTTIKAGIIDETGNLLLRKIVPTNRSLMEQLKEIIRTLMKNGNISCIGIGSAGRIDPQTGHVRFATTNLSN
WSDVPLKTVIEDSFHLPTVVINDANAAAFGEWFLHYRDTSSLVLLTIGTGLGGGIVINGRLVEGERGEAGEIGHVILHSD
GKQCNCGKKGCAEQYISMRIIHEKVASSKGKSLDRFELIKAFNEKDPEVIKAVEEVCSDLAQVVDWIFNFIDPENVIVGG
GIAELGEDFLKILRSKLAPYAKHSLYEPSNIKLAKTGNDAGIIGAALYSMYKNAKI

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI190014632, Length=186, Percent_Identity=32.7956989247312, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI298566325, Length=186, Percent_Identity=32.7956989247312, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4885285, Length=186, Percent_Identity=32.7956989247312, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI298566315, Length=186, Percent_Identity=32.7956989247312, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI1787363, Length=305, Percent_Identity=27.8688524590164, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI87081733, Length=298, Percent_Identity=29.5302013422819, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI87082230, Length=270, Percent_Identity=31.4814814814815, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786891, Length=242, Percent_Identity=26.4462809917355, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87082127, Length=237, Percent_Identity=21.9409282700422, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787878, Length=292, Percent_Identity=20.8904109589041, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1790522, Length=303, Percent_Identity=24.0924092409241, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: 2.7.1.2

Molecular weight: Translated: 32048; Mature: 32048

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS01125 ROK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALGIDIGGTTIKAGIIDETGNLLLRKIVPTNRSLMEQLKEIIRTLMKNGNISCIGIGS
CCEEEEECCCCEEEEEEECCCCCEEEEHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
AGRIDPQTGHVRFATTNLSNWSDVPLKTVIEDSFHLPTVVINDANAAAFGEWFLHYRDTS
CCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHEEEECCC
SLVLLTIGTGLGGGIVINGRLVEGERGEAGEIGHVILHSDGKQCNCGKKGCAEQYISMRI
CEEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
IHEKVASSKGKSLDRFELIKAFNEKDPEVIKAVEEVCSDLAQVVDWIFNFIDPENVIVGG
HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
GIAELGEDFLKILRSKLAPYAKHSLYEPSNIKLAKTGNDAGIIGAALYSMYKNAKI
CHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKALGIDIGGTTIKAGIIDETGNLLLRKIVPTNRSLMEQLKEIIRTLMKNGNISCIGIGS
CCEEEEECCCCEEEEEEECCCCCEEEEHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
AGRIDPQTGHVRFATTNLSNWSDVPLKTVIEDSFHLPTVVINDANAAAFGEWFLHYRDTS
CCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHEEEECCC
SLVLLTIGTGLGGGIVINGRLVEGERGEAGEIGHVILHSDGKQCNCGKKGCAEQYISMRI
CEEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
IHEKVASSKGKSLDRFELIKAFNEKDPEVIKAVEEVCSDLAQVVDWIFNFIDPENVIVGG
HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
GIAELGEDFLKILRSKLAPYAKHSLYEPSNIKLAKTGNDAGIIGAALYSMYKNAKI
CHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-glucose

Specific reaction: ATP + D-glucose = ADP + D-glucose 6-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]