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The map label for this gene is ycjN [C]

Identifier: 239617553

GI number: 239617553

Start: 1239688

End: 1240929

Strand: Direct

Name: ycjN [C]

Synonym: Kole_1171

Alternate gene names: 239617553

Gene position: 1239688-1240929 (Clockwise)

Preceding gene: 239617552

Following gene: 239617554

Centisome position: 53.85

GC content: 42.91

Gene sequence:

>1242_bases
GTGAAAAAGGTAGTAGCGGTGTTGTTGGTTGTTCTTTTGGCTACTTTTGTGGTAGCCAAGGTTAAGATCACGTTCTTTGG
CGACAATGATCCCAATAGTGCAGATGGCCTTTTGACAAGGCTCTTCAATGCATCCCAGGATGAAATTGAAGTTGAGTTTC
TTATTCAGTCATGGTCAACTGATGACAAACACACGGCTCTTGTTACAAGGCTGGGTGCTGGTGATCCAAATCCCACGGTA
TTCATGGGAGATGTAATTTGGCCGGCAGAGTTTGCGGCAGCTGGTTGGGTAATGGATCTTACAGACTATGTTTCTGAGGA
AGAATTGAAGGATTTCCTCCCTGGGACAATTCAGGCGTGTACCTATGAAGGAAGGCTGTATGCTCTTCCATCTTTTACTG
ATGCTGGTCTTTTGTACTACAGGAAAGATCTTCTTGAAAAATATGGCTATAAGGTTCCAGAAACCTGGGATGAATTGGTC
AAAATTGCAAAAGATATATCCGAAAAGGAAGGCATTTACGGCTTTGTCTTCCAGGGTGCCCAATACGAAGGACTTGTTTG
TGATGCAGTTGAATACATAGCTGGAAACGGAGGCGCTATAATTGATGCCAATGGGAAAGTCACAGTGAACAGCCCTGAGG
TTATTGAAGCGCTTCAGTTTATGCATGACATGATTTACAAATACAAGATTGCTCCAGAATCCGTTCTTTCTTTCATGGAA
GAAGATGCAAGAACAACCTTCCAGCAGGGAAAGGCTGTTTTTATGAGAAACTGGCCTTATTGTAACTCTCCGACAAACCT
CAATAGTCCTCAATCAGCTGTTAGAGGAAAATTCGGAATGGCTCCAATGCCCAGAGGGCCCAGAGGAAAATCTGGTGCTG
CTACGCTTGGAGGTTGGAACATCTTTATAAACAATTTTGCCTCTAAAGAGGAAAAAGAGGCTGCCATTAAATTCGCCAAG
TTCCTTACATCAGAAACAGCTCAGGTTATAAGAGCCATTATTGGTGGAAATTCTCCAACAAGAATTTCCGTTTACAGCAA
CCCTGCCGCTTTGAAAGCCAATCCTTCCTTAAAAGATTATTATCCAATTATGATTAATGCTGTTCCGAGACCAGTTACTC
CCTGGTATGCTGAAATAACTGATGTCATGCAGGAAGAGTTCCATGCCGCTCTCACTGGTGAAAAGACACCAGCTAAAGCT
GTAAGGGATCTTGAAAAGAAGATCAAGGCAATATATTGGTGA

Upstream 100 bases:

>100_bases
GGTTCAATCCAACATATTAAATTTCTTCCTGCCGTCGTTCGAAGAAATACAGCATAAATAATTGCCCCACTTTAGGGTTA
TTTTTTAGGAGGTGTAGGCT

Downstream 100 bases:

>100_bases
TAATGTTTATAAGATCTTTTTGCCTCAAATCTGGCCCCTTAAGGGGCCAGATTTATTGAAGGAGGGTTGAAGCATGAAGA
AGTACTCAAGAGAACGGCGT

Product: extracellular solute-binding protein family 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKKVVAVLLVVLLATFVVAKVKITFFGDNDPNSADGLLTRLFNASQDEIEVEFLIQSWSTDDKHTALVTRLGAGDPNPTV
FMGDVIWPAEFAAAGWVMDLTDYVSEEELKDFLPGTIQACTYEGRLYALPSFTDAGLLYYRKDLLEKYGYKVPETWDELV
KIAKDISEKEGIYGFVFQGAQYEGLVCDAVEYIAGNGGAIIDANGKVTVNSPEVIEALQFMHDMIYKYKIAPESVLSFME
EDARTTFQQGKAVFMRNWPYCNSPTNLNSPQSAVRGKFGMAPMPRGPRGKSGAATLGGWNIFINNFASKEEKEAAIKFAK
FLTSETAQVIRAIIGGNSPTRISVYSNPAALKANPSLKDYYPIMINAVPRPVTPWYAEITDVMQEEFHAALTGEKTPAKA
VRDLEKKIKAIYW

Sequences:

>Translated_413_residues
MKKVVAVLLVVLLATFVVAKVKITFFGDNDPNSADGLLTRLFNASQDEIEVEFLIQSWSTDDKHTALVTRLGAGDPNPTV
FMGDVIWPAEFAAAGWVMDLTDYVSEEELKDFLPGTIQACTYEGRLYALPSFTDAGLLYYRKDLLEKYGYKVPETWDELV
KIAKDISEKEGIYGFVFQGAQYEGLVCDAVEYIAGNGGAIIDANGKVTVNSPEVIEALQFMHDMIYKYKIAPESVLSFME
EDARTTFQQGKAVFMRNWPYCNSPTNLNSPQSAVRGKFGMAPMPRGPRGKSGAATLGGWNIFINNFASKEEKEAAIKFAK
FLTSETAQVIRAIIGGNSPTRISVYSNPAALKANPSLKDYYPIMINAVPRPVTPWYAEITDVMQEEFHAALTGEKTPAKA
VRDLEKKIKAIYW
>Mature_413_residues
MKKVVAVLLVVLLATFVVAKVKITFFGDNDPNSADGLLTRLFNASQDEIEVEFLIQSWSTDDKHTALVTRLGAGDPNPTV
FMGDVIWPAEFAAAGWVMDLTDYVSEEELKDFLPGTIQACTYEGRLYALPSFTDAGLLYYRKDLLEKYGYKVPETWDELV
KIAKDISEKEGIYGFVFQGAQYEGLVCDAVEYIAGNGGAIIDANGKVTVNSPEVIEALQFMHDMIYKYKIAPESVLSFME
EDARTTFQQGKAVFMRNWPYCNSPTNLNSPQSAVRGKFGMAPMPRGPRGKSGAATLGGWNIFINNFASKEEKEAAIKFAK
FLTSETAQVIRAIIGGNSPTRISVYSNPAALKANPSLKDYYPIMINAVPRPVTPWYAEITDVMQEEFHAALTGEKTPAKA
VRDLEKKIKAIYW

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45781; Mature: 45781

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVVAVLLVVLLATFVVAKVKITFFGDNDPNSADGLLTRLFNASQDEIEVEFLIQSWST
CHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCC
DDKHTALVTRLGAGDPNPTVFMGDVIWPAEFAAAGWVMDLTDYVSEEELKDFLPGTIQAC
CCHHHHHHEEECCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHCHHHHHHHCCCCEEEE
TYEGRLYALPSFTDAGLLYYRKDLLEKYGYKVPETWDELVKIAKDISEKEGIYGFVFQGA
EECCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCC
QYEGLVCDAVEYIAGNGGAIIDANGKVTVNSPEVIEALQFMHDMIYKYKIAPESVLSFME
CCCCCHHHHHHHHCCCCCEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EDARTTFQQGKAVFMRNWPYCNSPTNLNSPQSAVRGKFGMAPMPRGPRGKSGAATLGGWN
HHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEECCCCE
IFINNFASKEEKEAAIKFAKFLTSETAQVIRAIIGGNSPTRISVYSNPAALKANPSLKDY
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCC
YPIMINAVPRPVTPWYAEITDVMQEEFHAALTGEKTPAKAVRDLEKKIKAIYW
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKVVAVLLVVLLATFVVAKVKITFFGDNDPNSADGLLTRLFNASQDEIEVEFLIQSWST
CHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCC
DDKHTALVTRLGAGDPNPTVFMGDVIWPAEFAAAGWVMDLTDYVSEEELKDFLPGTIQAC
CCHHHHHHEEECCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHCHHHHHHHCCCCEEEE
TYEGRLYALPSFTDAGLLYYRKDLLEKYGYKVPETWDELVKIAKDISEKEGIYGFVFQGA
EECCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCC
QYEGLVCDAVEYIAGNGGAIIDANGKVTVNSPEVIEALQFMHDMIYKYKIAPESVLSFME
CCCCCHHHHHHHHCCCCCEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EDARTTFQQGKAVFMRNWPYCNSPTNLNSPQSAVRGKFGMAPMPRGPRGKSGAATLGGWN
HHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEECCCCE
IFINNFASKEEKEAAIKFAKFLTSETAQVIRAIIGGNSPTRISVYSNPAALKANPSLKDY
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCC
YPIMINAVPRPVTPWYAEITDVMQEEFHAALTGEKTPAKAVRDLEKKIKAIYW
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]